EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000021208 (Gene tree)
Gene ID: 101031352
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 25451 bases
Position: chrJH378125.1:25278818-25304268
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000008608	PolyA_pol	PF01743.20	2.6e-33	1	1
ENSSBOP00000008613	PolyA_pol	PF01743.20	2.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000025373	TRNT1-202	4282	XM_010337865	ENSSBOP00000008613	434 (aa)	XP_010336167	A0A2K6SMK9
ENSSBOT00000025368	TRNT1-201	6502	XM_003927132	ENSSBOP00000008608	434 (aa)	XP_003927181	A0A2K6SMK9
ENSSBOT00000025381	TRNT1-203	174	-	ENSSBOP00000008621	57 (aa)	-	A0A2K6SML8

Gene Model

Click here to download ENSSBOG00000021208's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000021208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000021208	TRNT1	100	96.544	ENSG00000072756	TRNT1	100	96.544	Homo_sapiens
ENSSBOG00000021208	TRNT1	93	68.889	ENSAPOG00000013687	trnt1	95	68.889	Acanthochromis_polyacanthus
ENSSBOG00000021208	TRNT1	100	92.202	ENSAMEG00000014520	TRNT1	100	92.202	Ailuropoda_melanoleuca
ENSSBOG00000021208	TRNT1	98	67.765	ENSACIG00000021706	trnt1	99	67.765	Amphilophus_citrinellus
ENSSBOG00000021208	TRNT1	96	68.675	ENSAOCG00000024612	trnt1	97	68.675	Amphiprion_ocellaris
ENSSBOG00000021208	TRNT1	94	61.425	ENSAPEG00000022627	trnt1	94	61.425	Amphiprion_percula
ENSSBOG00000021208	TRNT1	93	70.720	ENSATEG00000008928	trnt1	99	70.720	Anabas_testudineus
ENSSBOG00000021208	TRNT1	89	76.227	ENSAPLG00000004258	TRNT1	96	76.227	Anas_platyrhynchos
ENSSBOG00000021208	TRNT1	98	75.349	ENSACAG00000005657	TRNT1	98	75.349	Anolis_carolinensis
ENSSBOG00000021208	TRNT1	100	99.078	ENSANAG00000024802	TRNT1	100	99.078	Aotus_nancymaae
ENSSBOG00000021208	TRNT1	98	67.371	ENSACLG00000022227	trnt1	99	67.371	Astatotilapia_calliptera
ENSSBOG00000021208	TRNT1	97	68.646	ENSAMXG00000003960	trnt1	97	68.483	Astyanax_mexicanus
ENSSBOG00000021208	TRNT1	100	91.475	ENSBTAG00000019534	TRNT1	100	91.475	Bos_taurus
ENSSBOG00000021208	TRNT1	94	43.705	WBGene00010089	hpo-31	94	43.705	Caenorhabditis_elegans
ENSSBOG00000021208	TRNT1	100	99.078	ENSCJAG00000015466	TRNT1	100	99.078	Callithrix_jacchus
ENSSBOG00000021208	TRNT1	100	91.705	ENSCAFG00000005985	TRNT1	99	91.705	Canis_familiaris
ENSSBOG00000021208	TRNT1	100	91.705	ENSCAFG00020014746	TRNT1	99	91.705	Canis_lupus_dingo
ENSSBOG00000021208	TRNT1	100	91.475	ENSCHIG00000007030	TRNT1	99	91.475	Capra_hircus
ENSSBOG00000021208	TRNT1	100	95.161	ENSTSYG00000013390	TRNT1	100	95.161	Carlito_syrichta
ENSSBOG00000021208	TRNT1	87	75.132	ENSCAPG00000006891	TRNT1	100	75.132	Cavia_aperea
ENSSBOG00000021208	TRNT1	99	92.148	ENSCPOG00000007849	TRNT1	99	92.148	Cavia_porcellus
ENSSBOG00000021208	TRNT1	95	94.471	ENSCCAG00000002919	TRNT1	100	96.758	Cebus_capucinus
ENSSBOG00000021208	TRNT1	99	96.536	ENSCATG00000031985	TRNT1	99	96.536	Cercocebus_atys
ENSSBOG00000021208	TRNT1	99	92.379	ENSCLAG00000005186	TRNT1	99	92.379	Chinchilla_lanigera
ENSSBOG00000021208	TRNT1	100	97.005	ENSCSAG00000011052	TRNT1	100	97.005	Chlorocebus_sabaeus
ENSSBOG00000021208	TRNT1	85	91.584	ENSCHOG00000005712	TRNT1	85	91.584	Choloepus_hoffmanni
ENSSBOG00000021208	TRNT1	99	78.241	ENSCPBG00000017636	TRNT1	98	78.241	Chrysemys_picta_bellii
ENSSBOG00000021208	TRNT1	93	44.282	ENSCING00000007069	-	99	44.282	Ciona_intestinalis
ENSSBOG00000021208	TRNT1	97	44.706	ENSCSAVG00000007494	-	100	44.706	Ciona_savignyi
ENSSBOG00000021208	TRNT1	100	96.544	ENSCANG00000039030	TRNT1	100	96.544	Colobus_angolensis_palliatus
ENSSBOG00000021208	TRNT1	100	92.166	ENSCGRG00001009998	Trnt1	100	92.166	Cricetulus_griseus_chok1gshd
ENSSBOG00000021208	TRNT1	100	92.166	ENSCGRG00000013410	Trnt1	100	92.166	Cricetulus_griseus_crigri
ENSSBOG00000021208	TRNT1	94	68.227	ENSCSEG00000008157	trnt1	95	68.227	Cynoglossus_semilaevis
ENSSBOG00000021208	TRNT1	94	69.704	ENSCVAG00000019770	trnt1	96	69.704	Cyprinodon_variegatus
ENSSBOG00000021208	TRNT1	94	70.098	ENSDARG00000075297	trnt1	95	70.098	Danio_rerio
ENSSBOG00000021208	TRNT1	100	91.935	ENSDNOG00000008837	TRNT1	100	91.935	Dasypus_novemcinctus
ENSSBOG00000021208	TRNT1	100	90.323	ENSDORG00000014035	Trnt1	100	90.323	Dipodomys_ordii
ENSSBOG00000021208	TRNT1	92	49.136	FBgn0037369	CG2100	83	49.136	Drosophila_melanogaster
ENSSBOG00000021208	TRNT1	57	90.763	ENSETEG00000018177	TRNT1	100	90.763	Echinops_telfairi
ENSSBOG00000021208	TRNT1	93	62.283	ENSEBUG00000012779	-	95	62.283	Eptatretus_burgeri
ENSSBOG00000021208	TRNT1	100	94.009	ENSEASG00005003577	TRNT1	100	94.009	Equus_asinus_asinus
ENSSBOG00000021208	TRNT1	100	94.240	ENSECAG00000014420	TRNT1	100	94.240	Equus_caballus
ENSSBOG00000021208	TRNT1	100	89.862	ENSEEUG00000009567	TRNT1	100	89.862	Erinaceus_europaeus
ENSSBOG00000021208	TRNT1	94	70.098	ENSELUG00000003802	trnt1	95	70.098	Esox_lucius
ENSSBOG00000021208	TRNT1	100	91.935	ENSFCAG00000026805	TRNT1	99	91.935	Felis_catus
ENSSBOG00000021208	TRNT1	89	74.026	ENSFALG00000013539	TRNT1	100	74.026	Ficedula_albicollis
ENSSBOG00000021208	TRNT1	99	91.917	ENSFDAG00000018412	TRNT1	99	91.917	Fukomys_damarensis
ENSSBOG00000021208	TRNT1	96	67.612	ENSFHEG00000019294	trnt1	99	67.612	Fundulus_heteroclitus
ENSSBOG00000021208	TRNT1	93	67.407	ENSGMOG00000007460	trnt1	95	67.407	Gadus_morhua
ENSSBOG00000021208	TRNT1	97	72.066	ENSGALG00000017368	TRNT1	99	72.066	Gallus_gallus
ENSSBOG00000021208	TRNT1	94	69.212	ENSGAFG00000008647	trnt1	96	69.212	Gambusia_affinis
ENSSBOG00000021208	TRNT1	94	67.488	ENSGACG00000011903	trnt1	96	68.063	Gasterosteus_aculeatus
ENSSBOG00000021208	TRNT1	99	78.935	ENSGAGG00000020942	TRNT1	98	78.935	Gopherus_agassizii
ENSSBOG00000021208	TRNT1	100	96.774	ENSGGOG00000015286	TRNT1	100	96.774	Gorilla_gorilla
ENSSBOG00000021208	TRNT1	98	67.371	ENSHBUG00000002797	trnt1	99	67.371	Haplochromis_burtoni
ENSSBOG00000021208	TRNT1	99	91.686	ENSHGLG00000003649	TRNT1	99	91.686	Heterocephalus_glaber_female
ENSSBOG00000021208	TRNT1	99	86.175	ENSHGLG00000000221	-	99	86.175	Heterocephalus_glaber_female
ENSSBOG00000021208	TRNT1	99	90.531	ENSHGLG00100016421	TRNT1	99	90.531	Heterocephalus_glaber_male
ENSSBOG00000021208	TRNT1	94	66.995	ENSHCOG00000010618	trnt1	95	66.995	Hippocampus_comes
ENSSBOG00000021208	TRNT1	96	67.788	ENSIPUG00000000971	trnt1	97	67.788	Ictalurus_punctatus
ENSSBOG00000021208	TRNT1	100	88.710	ENSSTOG00000000150	TRNT1	98	92.574	Ictidomys_tridecemlineatus
ENSSBOG00000021208	TRNT1	100	92.627	ENSJJAG00000018561	Trnt1	99	92.627	Jaculus_jaculus
ENSSBOG00000021208	TRNT1	96	67.689	ENSKMAG00000011307	trnt1	99	67.689	Kryptolebias_marmoratus
ENSSBOG00000021208	TRNT1	94	63.391	ENSLBEG00000019457	trnt1	96	63.391	Labrus_bergylta
ENSSBOG00000021208	TRNT1	99	70.766	ENSLACG00000013227	TRNT1	99	70.766	Latimeria_chalumnae
ENSSBOG00000021208	TRNT1	99	68.807	ENSLOCG00000011105	trnt1	99	68.807	Lepisosteus_oculatus
ENSSBOG00000021208	TRNT1	100	94.009	ENSLAFG00000023191	TRNT1	100	94.009	Loxodonta_africana
ENSSBOG00000021208	TRNT1	99	96.767	ENSMFAG00000045113	TRNT1	99	96.767	Macaca_fascicularis
ENSSBOG00000021208	TRNT1	99	96.767	ENSMMUG00000017983	TRNT1	99	96.767	Macaca_mulatta
ENSSBOG00000021208	TRNT1	99	96.767	ENSMNEG00000037805	TRNT1	99	96.767	Macaca_nemestrina
ENSSBOG00000021208	TRNT1	88	97.120	ENSMLEG00000033671	TRNT1	99	97.120	Mandrillus_leucophaeus
ENSSBOG00000021208	TRNT1	96	68.675	ENSMAMG00000023401	trnt1	97	68.675	Mastacembelus_armatus
ENSSBOG00000021208	TRNT1	98	67.371	ENSMZEG00005009141	trnt1	99	67.371	Maylandia_zebra
ENSSBOG00000021208	TRNT1	74	74.455	ENSMGAG00000009971	TRNT1	100	74.455	Meleagris_gallopavo
ENSSBOG00000021208	TRNT1	100	92.396	ENSMAUG00000020707	Trnt1	100	92.396	Mesocricetus_auratus
ENSSBOG00000021208	TRNT1	100	92.627	ENSMICG00000016615	TRNT1	100	92.627	Microcebus_murinus
ENSSBOG00000021208	TRNT1	100	92.166	ENSMOCG00000004539	Trnt1	100	92.166	Microtus_ochrogaster
ENSSBOG00000021208	TRNT1	95	67.797	ENSMMOG00000010742	trnt1	97	67.797	Mola_mola
ENSSBOG00000021208	TRNT1	100	84.101	ENSMODG00000004368	TRNT1	100	84.101	Monodelphis_domestica
ENSSBOG00000021208	TRNT1	98	66.353	ENSMALG00000008376	trnt1	99	66.353	Monopterus_albus
ENSSBOG00000021208	TRNT1	100	92.627	MGP_CAROLIEiJ_G0028698	Trnt1	100	92.627	Mus_caroli
ENSSBOG00000021208	TRNT1	100	92.627	ENSMUSG00000013736	Trnt1	100	92.627	Mus_musculus
ENSSBOG00000021208	TRNT1	100	91.935	MGP_PahariEiJ_G0022449	Trnt1	100	91.935	Mus_pahari
ENSSBOG00000021208	TRNT1	100	92.627	MGP_SPRETEiJ_G0029726	Trnt1	100	92.627	Mus_spretus
ENSSBOG00000021208	TRNT1	100	92.396	ENSMPUG00000017017	TRNT1	99	92.396	Mustela_putorius_furo
ENSSBOG00000021208	TRNT1	89	87.565	ENSMLUG00000011864	TRNT1	100	87.565	Myotis_lucifugus
ENSSBOG00000021208	TRNT1	100	91.705	ENSNGAG00000000537	Trnt1	100	91.705	Nannospalax_galili
ENSSBOG00000021208	TRNT1	79	67.052	ENSNBRG00000023606	trnt1	99	67.052	Neolamprologus_brichardi
ENSSBOG00000021208	TRNT1	100	97.465	ENSNLEG00000003226	TRNT1	100	97.465	Nomascus_leucogenys
ENSSBOG00000021208	TRNT1	100	84.101	ENSMEUG00000004684	TRNT1	100	84.101	Notamacropus_eugenii
ENSSBOG00000021208	TRNT1	88	80.157	ENSOPRG00000015067	TRNT1	99	80.157	Ochotona_princeps
ENSSBOG00000021208	TRNT1	99	91.686	ENSODEG00000007597	TRNT1	99	91.686	Octodon_degus
ENSSBOG00000021208	TRNT1	98	67.840	ENSONIG00000020273	trnt1	98	67.840	Oreochromis_niloticus
ENSSBOG00000021208	TRNT1	99	75.000	ENSOANG00000007514	TRNT1	99	75.000	Ornithorhynchus_anatinus
ENSSBOG00000021208	TRNT1	100	85.945	ENSOCUG00000008580	TRNT1	99	85.945	Oryctolagus_cuniculus
ENSSBOG00000021208	TRNT1	96	66.427	ENSORLG00000003165	trnt1	98	66.427	Oryzias_latipes
ENSSBOG00000021208	TRNT1	96	66.667	ENSORLG00020022060	trnt1	98	66.667	Oryzias_latipes_hni
ENSSBOG00000021208	TRNT1	98	64.941	ENSORLG00015018915	trnt1	99	64.941	Oryzias_latipes_hsok
ENSSBOG00000021208	TRNT1	95	65.291	ENSOMEG00000003331	trnt1	97	65.291	Oryzias_melastigma
ENSSBOG00000021208	TRNT1	100	91.244	ENSOARG00000008631	TRNT1	99	91.244	Ovis_aries
ENSSBOG00000021208	TRNT1	100	96.774	ENSPPAG00000043566	TRNT1	100	96.774	Pan_paniscus
ENSSBOG00000021208	TRNT1	99	92.379	ENSPPRG00000001327	TRNT1	99	92.379	Panthera_pardus
ENSSBOG00000021208	TRNT1	100	91.935	ENSPTIG00000011448	TRNT1	99	91.935	Panthera_tigris_altaica
ENSSBOG00000021208	TRNT1	100	96.774	ENSPTRG00000014564	TRNT1	100	96.774	Pan_troglodytes
ENSSBOG00000021208	TRNT1	99	96.536	ENSPANG00000025944	TRNT1	99	96.536	Papio_anubis
ENSSBOG00000021208	TRNT1	97	69.596	ENSPKIG00000020015	trnt1	97	69.596	Paramormyrops_kingsleyae
ENSSBOG00000021208	TRNT1	91	80.353	ENSPSIG00000017356	TRNT1	99	81.944	Pelodiscus_sinensis
ENSSBOG00000021208	TRNT1	98	66.353	ENSPMGG00000008888	trnt1	98	66.353	Periophthalmus_magnuspinnatus
ENSSBOG00000021208	TRNT1	100	93.088	ENSPEMG00000019845	Trnt1	100	93.088	Peromyscus_maniculatus_bairdii
ENSSBOG00000021208	TRNT1	100	84.332	ENSPCIG00000030436	TRNT1	100	84.332	Phascolarctos_cinereus
ENSSBOG00000021208	TRNT1	94	68.966	ENSPFOG00000006194	trnt1	95	68.966	Poecilia_formosa
ENSSBOG00000021208	TRNT1	94	68.966	ENSPLAG00000015623	trnt1	99	68.734	Poecilia_latipinna
ENSSBOG00000021208	TRNT1	94	68.966	ENSPMEG00000012216	trnt1	99	68.734	Poecilia_mexicana
ENSSBOG00000021208	TRNT1	96	66.903	ENSPREG00000021470	trnt1	99	66.903	Poecilia_reticulata
ENSSBOG00000021208	TRNT1	100	97.005	ENSPPYG00000013702	TRNT1	100	97.005	Pongo_abelii
ENSSBOG00000021208	TRNT1	88	92.428	ENSPCAG00000001951	TRNT1	100	92.428	Procavia_capensis
ENSSBOG00000021208	TRNT1	100	94.009	ENSPCOG00000022228	TRNT1	100	94.009	Propithecus_coquereli
ENSSBOG00000021208	TRNT1	88	91.927	ENSPVAG00000008784	TRNT1	100	91.927	Pteropus_vampyrus
ENSSBOG00000021208	TRNT1	98	67.371	ENSPNYG00000003120	trnt1	99	67.371	Pundamilia_nyererei
ENSSBOG00000021208	TRNT1	98	66.977	ENSPNAG00000000565	trnt1	99	66.977	Pygocentrus_nattereri
ENSSBOG00000021208	TRNT1	100	92.396	ENSRNOG00000006432	Trnt1	100	92.396	Rattus_norvegicus
ENSSBOG00000021208	TRNT1	100	94.009	ENSRBIG00000042632	TRNT1	100	94.009	Rhinopithecus_bieti
ENSSBOG00000021208	TRNT1	100	96.313	ENSRROG00000036866	TRNT1	100	96.313	Rhinopithecus_roxellana
ENSSBOG00000021208	TRNT1	100	84.101	ENSSHAG00000018861	TRNT1	100	84.101	Sarcophilus_harrisii
ENSSBOG00000021208	TRNT1	99	67.512	ENSSFOG00015020844	trnt1	94	70.617	Scleropages_formosus
ENSSBOG00000021208	TRNT1	96	67.952	ENSSMAG00000015432	trnt1	95	67.952	Scophthalmus_maximus
ENSSBOG00000021208	TRNT1	94	68.719	ENSSDUG00000012320	trnt1	95	68.719	Seriola_dumerili
ENSSBOG00000021208	TRNT1	56	63.900	ENSSLDG00000016463	-	96	61.660	Seriola_lalandi_dorsalis
ENSSBOG00000021208	TRNT1	94	68.719	ENSSLDG00000009325	trnt1	95	68.719	Seriola_lalandi_dorsalis
ENSSBOG00000021208	TRNT1	88	81.510	ENSSPUG00000014153	TRNT1	100	81.510	Sphenodon_punctatus
ENSSBOG00000021208	TRNT1	98	66.118	ENSSPAG00000021005	trnt1	99	66.118	Stegastes_partitus
ENSSBOG00000021208	TRNT1	100	93.088	ENSSSCG00000011529	TRNT1	100	93.088	Sus_scrofa
ENSSBOG00000021208	TRNT1	93	74.321	ENSTGUG00000010192	TRNT1	99	74.321	Taeniopygia_guttata
ENSSBOG00000021208	TRNT1	98	67.529	ENSTRUG00000001088	trnt1	99	67.529	Takifugu_rubripes
ENSSBOG00000021208	TRNT1	99	67.130	ENSTNIG00000007363	trnt1	98	67.130	Tetraodon_nigroviridis
ENSSBOG00000021208	TRNT1	70	78.277	ENSTBEG00000006367	TRNT1	100	78.277	Tupaia_belangeri
ENSSBOG00000021208	TRNT1	100	91.475	ENSTTRG00000007803	TRNT1	100	91.475	Tursiops_truncatus
ENSSBOG00000021208	TRNT1	100	91.705	ENSUAMG00000022574	TRNT1	99	91.705	Ursus_americanus
ENSSBOG00000021208	TRNT1	100	92.166	ENSUMAG00000024092	TRNT1	99	92.166	Ursus_maritimus
ENSSBOG00000021208	TRNT1	100	91.935	ENSVVUG00000012810	TRNT1	99	91.935	Vulpes_vulpes
ENSSBOG00000021208	TRNT1	95	65.144	ENSXETG00000025091	trnt1	99	66.169	Xenopus_tropicalis
ENSSBOG00000021208	TRNT1	94	69.212	ENSXCOG00000010150	trnt1	96	69.212	Xiphophorus_couchianus
ENSSBOG00000021208	TRNT1	94	68.719	ENSXMAG00000002227	trnt1	96	68.719	Xiphophorus_maculatus