EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSBOG00000021299 (Gene tree)
Gene ID
101035990
Gene Symbol
TRNAU1AP
Alias
FLJ20503|SECP43|TRSPAP1
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Saimiri_boliviensis_boliviensis
Status
putative
Strand
Minus strand
Length
31553 bases
Position
chrJH378323.1:111731-143283
Accession
30813
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSBOP00000008833RRM_1PF00076.223.1e-2712
ENSSBOP00000008833RRM_1PF00076.223.1e-2722
ENSSBOP00000008854RRM_1PF00076.221.4e-1711
ENSSBOP00000008857RRM_1PF00076.223e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSBOT00000025595TRNAU1AP-2013519XM_003944579ENSSBOP00000008833287 (aa)XP_003944628A0A2K6SN84
ENSSBOT00000025616TRNAU1AP-202744-ENSSBOP00000008854247 (aa)-A0A2K6SN78
ENSSBOT00000025619TRNAU1AP-203255-ENSSBOP0000000885784 (aa)-A0A2K6SN99
Gene Model
Click here to download ENSSBOG00000021299's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000021299's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSBOG00000021299TRNAU1AP8637.500ENSSBOG00000016382PABPC4L9732.927
ENSSBOG00000021299TRNAU1AP6034.586ENSSBOG00000028408TIAL16334.586
ENSSBOG00000021299TRNAU1AP5830.409ENSSBOG00000008658PABPC57430.508
ENSSBOG00000021299TRNAU1AP7031.034ENSSBOG00000023677PABPC35931.034
ENSSBOG00000021299TRNAU1AP7830.198ENSSBOG00000034106TIA15830.857
ENSSBOG00000021299TRNAU1AP7131.034ENSSBOG00000022216PABPC15631.034
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSBOG00000021299TRNAU1AP100100.000ENSG00000180098TRNAU1AP100100.000Homo_sapiens
ENSSBOG00000021299TRNAU1AP9065.789ENSAPOG00000010359-8167.105Acanthochromis_polyacanthus
ENSSBOG00000021299TRNAU1AP9065.789ENSAPOG00000007188-8167.105Acanthochromis_polyacanthus
ENSSBOG00000021299TRNAU1AP9858.416ENSAPOG00000007148TRNAU1AP9858.416Acanthochromis_polyacanthus
ENSSBOG00000021299TRNAU1AP10098.955ENSAMEG00000011367TRNAU1AP10098.955Ailuropoda_melanoleuca
ENSSBOG00000021299TRNAU1AP9170.115ENSACIG00000004161trnau1apa9370.115Amphilophus_citrinellus
ENSSBOG00000021299TRNAU1AP9858.416ENSAOCG00000008056trnau1apa9858.416Amphiprion_ocellaris
ENSSBOG00000021299TRNAU1AP9858.416ENSAPEG00000008868trnau1apa9858.586Amphiprion_percula
ENSSBOG00000021299TRNAU1AP9858.199ENSATEG00000012140trnau1apa9856.270Anabas_testudineus
ENSSBOG00000021299TRNAU1AP9493.704ENSAPLG00000002606TRNAU1AP9993.704Anas_platyrhynchos
ENSSBOG00000021299TRNAU1AP6752.083ENSACAG00000004205-7352.083Anolis_carolinensis
ENSSBOG00000021299TRNAU1AP9385.897ENSACAG00000003995-9975.874Anolis_carolinensis
ENSSBOG00000021299TRNAU1AP100100.000ENSANAG00000018976TRNAU1AP100100.000Aotus_nancymaae
ENSSBOG00000021299TRNAU1AP9859.000ENSACLG00000018515trnau1apa9860.403Astatotilapia_calliptera
ENSSBOG00000021299TRNAU1AP9565.556ENSAMXG00000029240-9865.556Astyanax_mexicanus
ENSSBOG00000021299TRNAU1AP8372.857ENSAMXG00000013750trnau1apa9057.762Astyanax_mexicanus
ENSSBOG00000021299TRNAU1AP10099.652ENSBTAG00000010393TRNAU1AP10099.652Bos_taurus
ENSSBOG00000021299TRNAU1AP100100.000ENSCJAG00000009717TRNAU1AP100100.000Callithrix_jacchus
ENSSBOG00000021299TRNAU1AP10099.652ENSCAFG00000011735TRNAU1AP10099.652Canis_familiaris
ENSSBOG00000021299TRNAU1AP10099.652ENSCAFG00020023584TRNAU1AP10099.652Canis_lupus_dingo
ENSSBOG00000021299TRNAU1AP10099.595ENSCHIG00000023215TRNAU1AP10099.595Capra_hircus
ENSSBOG00000021299TRNAU1AP100100.000ENSTSYG00000003506TRNAU1AP100100.000Carlito_syrichta
ENSSBOG00000021299TRNAU1AP10099.303ENSCPOG00000001925TRNAU1AP10099.303Cavia_porcellus
ENSSBOG00000021299TRNAU1AP100100.000ENSCCAG00000037506TRNAU1AP100100.000Cebus_capucinus
ENSSBOG00000021299TRNAU1AP100100.000ENSCATG00000044617TRNAU1AP100100.000Cercocebus_atys
ENSSBOG00000021299TRNAU1AP10098.606ENSCLAG00000008223TRNAU1AP10098.606Chinchilla_lanigera
ENSSBOG00000021299TRNAU1AP10099.652ENSCSAG00000001014TRNAU1AP10099.652Chlorocebus_sabaeus
ENSSBOG00000021299TRNAU1AP9594.891ENSCPBG00000000121TRNAU1AP10094.891Chrysemys_picta_bellii
ENSSBOG00000021299TRNAU1AP9944.681ENSCSAVG00000011781-9844.681Ciona_savignyi
ENSSBOG00000021299TRNAU1AP10088.153ENSCANG00000041949TRNAU1AP100100.000Colobus_angolensis_palliatus
ENSSBOG00000021299TRNAU1AP10099.303ENSCGRG00001004713Trnau1ap10099.303Cricetulus_griseus_chok1gshd
ENSSBOG00000021299TRNAU1AP10099.303ENSCGRG00000014532Trnau1ap10099.303Cricetulus_griseus_crigri
ENSSBOG00000021299TRNAU1AP8771.233ENSCSEG00000006663trnau1apa9458.607Cynoglossus_semilaevis
ENSSBOG00000021299TRNAU1AP9757.823ENSCVAG00000018069trnau1apa9459.341Cyprinodon_variegatus
ENSSBOG00000021299TRNAU1AP8668.056ENSDARG00000101323trnau1apa8851.957Danio_rerio
ENSSBOG00000021299TRNAU1AP8182.353ENSDNOG00000047959-9778.075Dasypus_novemcinctus
ENSSBOG00000021299TRNAU1AP10099.652ENSDNOG00000033009TRNAU1AP10099.652Dasypus_novemcinctus
ENSSBOG00000021299TRNAU1AP9991.608ENSDORG00000006349Trnau1ap100100.000Dipodomys_ordii
ENSSBOG00000021299TRNAU1AP9651.493FBgn0031607CG154405152.023Drosophila_melanogaster
ENSSBOG00000021299TRNAU1AP8594.694ENSETEG00000012594TRNAU1AP10094.694Echinops_telfairi
ENSSBOG00000021299TRNAU1AP8962.338ENSEBUG00000009958-7862.338Eptatretus_burgeri
ENSSBOG00000021299TRNAU1AP8561.972ENSEBUG00000006349-6059.341Eptatretus_burgeri
ENSSBOG00000021299TRNAU1AP100100.000ENSEASG00005010062TRNAU1AP100100.000Equus_asinus_asinus
ENSSBOG00000021299TRNAU1AP100100.000ENSECAG00000012980TRNAU1AP100100.000Equus_caballus
ENSSBOG00000021299TRNAU1AP9670.526ENSELUG00000022790-9453.814Esox_lucius
ENSSBOG00000021299TRNAU1AP9663.066ENSELUG00000017686trnau1apa9462.718Esox_lucius
ENSSBOG00000021299TRNAU1AP100100.000ENSFCAG00000013401TRNAU1AP100100.000Felis_catus
ENSSBOG00000021299TRNAU1AP9593.796ENSFALG00000001371TRNAU1AP10093.796Ficedula_albicollis
ENSSBOG00000021299TRNAU1AP10098.606ENSFDAG00000018599TRNAU1AP10098.606Fukomys_damarensis
ENSSBOG00000021299TRNAU1AP8764.103ENSFHEG00000018232trnau1apa8656.757Fundulus_heteroclitus
ENSSBOG00000021299TRNAU1AP8763.014ENSGMOG00000016508trnau1apa9354.930Gadus_morhua
ENSSBOG00000021299TRNAU1AP10093.380ENSGALG00000001310-10093.380Gallus_gallus
ENSSBOG00000021299TRNAU1AP6849.296ENSGALG00000012721C2H6orf529544.788Gallus_gallus
ENSSBOG00000021299TRNAU1AP8765.753ENSGAFG00000004928trnau1apa9059.244Gambusia_affinis
ENSSBOG00000021299TRNAU1AP9860.274ENSGACG00000001443trnau1apa9559.932Gasterosteus_aculeatus
ENSSBOG00000021299TRNAU1AP9595.255ENSGAGG00000004940TRNAU1AP10095.255Gopherus_agassizii
ENSSBOG00000021299TRNAU1AP100100.000ENSGGOG00000003511TRNAU1AP100100.000Gorilla_gorilla
ENSSBOG00000021299TRNAU1AP8769.863ENSHBUG00000002510trnau1apa9859.406Haplochromis_burtoni
ENSSBOG00000021299TRNAU1AP10098.606ENSHGLG00000010380TRNAU1AP10098.606Heterocephalus_glaber_female
ENSSBOG00000021299TRNAU1AP10096.167ENSHGLG00100012699TRNAU1AP10096.167Heterocephalus_glaber_male
ENSSBOG00000021299TRNAU1AP9957.096ENSHCOG00000014770trnau1apa9766.429Hippocampus_comes
ENSSBOG00000021299TRNAU1AP100100.000ENSSTOG00000000079TRNAU1AP100100.000Ictidomys_tridecemlineatus
ENSSBOG00000021299TRNAU1AP10098.955ENSJJAG00000010128Trnau1ap10098.955Jaculus_jaculus
ENSSBOG00000021299TRNAU1AP9560.208ENSKMAG00000001230trnau1apa9358.478Kryptolebias_marmoratus
ENSSBOG00000021299TRNAU1AP9560.751ENSLBEG00000011683trnau1apa9359.864Labrus_bergylta
ENSSBOG00000021299TRNAU1AP9972.632ENSLACG00000005541TRNAU1AP9972.632Latimeria_chalumnae
ENSSBOG00000021299TRNAU1AP9972.028ENSLOCG00000004041trnau1apa9970.979Lepisosteus_oculatus
ENSSBOG00000021299TRNAU1AP10099.652ENSLAFG00000007628TRNAU1AP10099.652Loxodonta_africana
ENSSBOG00000021299TRNAU1AP100100.000ENSMFAG00000043751TRNAU1AP100100.000Macaca_fascicularis
ENSSBOG00000021299TRNAU1AP100100.000ENSMMUG00000006561TRNAU1AP100100.000Macaca_mulatta
ENSSBOG00000021299TRNAU1AP100100.000ENSMNEG00000044201TRNAU1AP100100.000Macaca_nemestrina
ENSSBOG00000021299TRNAU1AP100100.000ENSMLEG00000015649TRNAU1AP100100.000Mandrillus_leucophaeus
ENSSBOG00000021299TRNAU1AP9858.958ENSMAMG00000001247trnau1apa9858.824Mastacembelus_armatus
ENSSBOG00000021299TRNAU1AP9859.000ENSMZEG00005017722trnau1apa9860.403Maylandia_zebra
ENSSBOG00000021299TRNAU1AP9793.165ENSMGAG00000002105TRNAU1AP10093.165Meleagris_gallopavo
ENSSBOG00000021299TRNAU1AP100100.000ENSMICG00000008386TRNAU1AP100100.000Microcebus_murinus
ENSSBOG00000021299TRNAU1AP10098.955ENSMOCG00000011189Trnau1ap10098.955Microtus_ochrogaster
ENSSBOG00000021299TRNAU1AP8768.493ENSMMOG00000012107trnau1apa9556.429Mola_mola
ENSSBOG00000021299TRNAU1AP10095.470ENSMODG00000010927TRNAU1AP10095.470Monodelphis_domestica
ENSSBOG00000021299TRNAU1AP9661.092ENSMALG00000016778trnau1apa9458.362Monopterus_albus
ENSSBOG00000021299TRNAU1AP10099.190MGP_CAROLIEiJ_G0026563Trnau1ap100100.000Mus_caroli
ENSSBOG00000021299TRNAU1AP10099.190ENSMUSG00000028898Trnau1ap100100.000Mus_musculus
ENSSBOG00000021299TRNAU1AP10099.595MGP_PahariEiJ_G0028896Trnau1ap100100.000Mus_pahari
ENSSBOG00000021299TRNAU1AP10098.785MGP_SPRETEiJ_G0027544Trnau1ap100100.000Mus_spretus
ENSSBOG00000021299TRNAU1AP10099.303ENSMPUG00000015511TRNAU1AP10099.303Mustela_putorius_furo
ENSSBOG00000021299TRNAU1AP10099.652ENSMLUG00000012586TRNAU1AP10099.652Myotis_lucifugus
ENSSBOG00000021299TRNAU1AP10097.571ENSNGAG00000015881Trnau1ap10097.571Nannospalax_galili
ENSSBOG00000021299TRNAU1AP9562.500ENSNBRG00000001758trnau1apa9856.997Neolamprologus_brichardi
ENSSBOG00000021299TRNAU1AP100100.000ENSNLEG00000009822TRNAU1AP100100.000Nomascus_leucogenys
ENSSBOG00000021299TRNAU1AP9794.245ENSMEUG00000006117TRNAU1AP10094.245Notamacropus_eugenii
ENSSBOG00000021299TRNAU1AP8298.182ENSOPRG00000007084-6998.182Ochotona_princeps
ENSSBOG00000021299TRNAU1AP10098.955ENSODEG00000002970TRNAU1AP10098.955Octodon_degus
ENSSBOG00000021299TRNAU1AP7971.212ENSONIG00000004715trnau1apa9559.917Oreochromis_niloticus
ENSSBOG00000021299TRNAU1AP8694.444ENSOANG00000005325-9974.476Ornithorhynchus_anatinus
ENSSBOG00000021299TRNAU1AP10077.778ENSOCUG00000002353-10077.778Oryctolagus_cuniculus
ENSSBOG00000021299TRNAU1AP10097.909ENSOCUG00000011704-10097.909Oryctolagus_cuniculus
ENSSBOG00000021299TRNAU1AP9473.418ENSOCUG00000006834-10075.391Oryctolagus_cuniculus
ENSSBOG00000021299TRNAU1AP9858.865ENSORLG00000010428trnau1apa9557.042Oryzias_latipes
ENSSBOG00000021299TRNAU1AP9858.020ENSORLG00020000926trnau1ap9556.849Oryzias_latipes_hni
ENSSBOG00000021299TRNAU1AP9858.020ENSORLG00015009858trnau1ap9556.849Oryzias_latipes_hsok
ENSSBOG00000021299TRNAU1AP9859.044ENSOMEG00000007873trnau1apa9556.164Oryzias_melastigma
ENSSBOG00000021299TRNAU1AP10099.652ENSOGAG00000002274TRNAU1AP10099.652Otolemur_garnettii
ENSSBOG00000021299TRNAU1AP10099.303ENSOARG00000002843TRNAU1AP10099.303Ovis_aries
ENSSBOG00000021299TRNAU1AP100100.000ENSPPAG00000033927TRNAU1AP100100.000Pan_paniscus
ENSSBOG00000021299TRNAU1AP100100.000ENSPPRG00000004416TRNAU1AP100100.000Panthera_pardus
ENSSBOG00000021299TRNAU1AP100100.000ENSPTIG00000016677TRNAU1AP100100.000Panthera_tigris_altaica
ENSSBOG00000021299TRNAU1AP9381.181ENSPTRG00000000434-9779.705Pan_troglodytes
ENSSBOG00000021299TRNAU1AP100100.000ENSPANG00000016019TRNAU1AP100100.000Papio_anubis
ENSSBOG00000021299TRNAU1AP8772.603ENSPKIG00000015511trnau1apa9257.951Paramormyrops_kingsleyae
ENSSBOG00000021299TRNAU1AP9474.468ENSPKIG00000022205-9377.528Paramormyrops_kingsleyae
ENSSBOG00000021299TRNAU1AP9595.255ENSPSIG00000006864TRNAU1AP10095.255Pelodiscus_sinensis
ENSSBOG00000021299TRNAU1AP9461.397ENSPMGG00000023893trnau1apa9160.517Periophthalmus_magnuspinnatus
ENSSBOG00000021299TRNAU1AP10098.955ENSPEMG00000007877Trnau1ap10098.955Peromyscus_maniculatus_bairdii
ENSSBOG00000021299TRNAU1AP8560.563ENSPMAG00000005934trnau1apa9660.185Petromyzon_marinus
ENSSBOG00000021299TRNAU1AP9462.025ENSPMAG00000000592trnau1apa9760.227Petromyzon_marinus
ENSSBOG00000021299TRNAU1AP8765.753ENSPFOG00000008100trnau1apa9357.639Poecilia_formosa
ENSSBOG00000021299TRNAU1AP9156.679ENSPLAG00000010236trnau1apa9357.401Poecilia_latipinna
ENSSBOG00000021299TRNAU1AP9655.862ENSPMEG00000016387trnau1apa9256.552Poecilia_mexicana
ENSSBOG00000021299TRNAU1AP9353.903ENSPREG00000019821trnau1apa8664.286Poecilia_reticulata
ENSSBOG00000021299TRNAU1AP10091.093ENSPPYG00000001639-10091.093Pongo_abelii
ENSSBOG00000021299TRNAU1AP10099.652ENSPCOG00000027712-10099.652Propithecus_coquereli
ENSSBOG00000021299TRNAU1AP9895.455ENSPCOG00000023470-10095.455Propithecus_coquereli
ENSSBOG00000021299TRNAU1AP100100.000ENSPVAG00000017214TRNAU1AP100100.000Pteropus_vampyrus
ENSSBOG00000021299TRNAU1AP9864.634ENSPNYG00000010130trnau1apa9859.406Pundamilia_nyererei
ENSSBOG00000021299TRNAU1AP8769.863ENSPNAG00000024905trnau1apa9154.317Pygocentrus_nattereri
ENSSBOG00000021299TRNAU1AP89100.000ENSRNOG00000055344Trnau1ap9290.775Rattus_norvegicus
ENSSBOG00000021299TRNAU1AP100100.000ENSRBIG00000029083TRNAU1AP100100.000Rhinopithecus_bieti
ENSSBOG00000021299TRNAU1AP100100.000ENSRROG00000029128TRNAU1AP100100.000Rhinopithecus_roxellana
ENSSBOG00000021299TRNAU1AP10094.774ENSSHAG00000008108TRNAU1AP10094.774Sarcophilus_harrisii
ENSSBOG00000021299TRNAU1AP9853.722ENSSMAG00000020851trnau1apa9857.049Scophthalmus_maximus
ENSSBOG00000021299TRNAU1AP8769.863ENSSDUG00000011734trnau1apa9457.483Seriola_dumerili
ENSSBOG00000021299TRNAU1AP8769.863ENSSLDG00000012101trnau1apa9260.851Seriola_lalandi_dorsalis
ENSSBOG00000021299TRNAU1AP9798.561ENSSARG00000007536TRNAU1AP10098.561Sorex_araneus
ENSSBOG00000021299TRNAU1AP9986.364ENSSPUG00000010400-10086.364Sphenodon_punctatus
ENSSBOG00000021299TRNAU1AP6182.386ENSSPUG00000010415-10082.386Sphenodon_punctatus
ENSSBOG00000021299TRNAU1AP9858.689ENSSPAG00000005029trnau1apa9857.980Stegastes_partitus
ENSSBOG00000021299TRNAU1AP100100.000ENSSSCG00000030284TRNAU1AP100100.000Sus_scrofa
ENSSBOG00000021299TRNAU1AP6853.061ENSTGUG00000005908-10053.061Taeniopygia_guttata
ENSSBOG00000021299TRNAU1AP9794.245ENSTGUG00000000735-10094.245Taeniopygia_guttata
ENSSBOG00000021299TRNAU1AP9859.136ENSTRUG00000003352trnau1apa9858.472Takifugu_rubripes
ENSSBOG00000021299TRNAU1AP9857.096ENSTNIG00000006129trnau1apa9857.096Tetraodon_nigroviridis
ENSSBOG00000021299TRNAU1AP8588.163ENSTBEG00000008049-10088.163Tupaia_belangeri
ENSSBOG00000021299TRNAU1AP10099.652ENSTTRG00000001854TRNAU1AP10099.652Tursiops_truncatus
ENSSBOG00000021299TRNAU1AP9599.635ENSUAMG00000008789TRNAU1AP10099.635Ursus_americanus
ENSSBOG00000021299TRNAU1AP10099.303ENSUMAG00000011068TRNAU1AP10099.303Ursus_maritimus
ENSSBOG00000021299TRNAU1AP10089.041ENSVPAG00000006778TRNAU1AP10089.041Vicugna_pacos
ENSSBOG00000021299TRNAU1AP9997.887ENSVVUG00000012518TRNAU1AP9397.887Vulpes_vulpes
ENSSBOG00000021299TRNAU1AP8765.753ENSXMAG00000017361trnau1apa9357.639Xiphophorus_maculatus

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