EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000021649 (Gene tree)
Gene ID: 101050708
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 26980 bases
Position: chrJH378228.1:5192323-5219302
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000009740	RRM_1	PF00076.22	1.8e-25	1	1
ENSSBOP00000009714	RRM_1	PF00076.22	2.2e-25	1	1
ENSSBOP00000009730	RRM_1	PF00076.22	2.3e-25	1	1
ENSSBOP00000009709	RRM_1	PF00076.22	2.3e-25	1	1
ENSSBOP00000009708	RRM_1	PF00076.22	2.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000026475	CSTF2-201	6161	XM_010350844	ENSSBOP00000009708	626 (aa)	XP_010349146	A0A2K6SQP6
ENSSBOT00000026507	CSTF2-205	1659	-	ENSSBOP00000009740	552 (aa)	-	A0A2K6SQS7
ENSSBOT00000026476	CSTF2-202	6074	XM_003940129	ENSSBOP00000009709	597 (aa)	XP_003940178	A0A2K6SQP7
ENSSBOT00000026497	CSTF2-204	1779	-	ENSSBOP00000009730	592 (aa)	-	A0A2K6SQR0
ENSSBOT00000026481	CSTF2-203	2015	XM_003940127	ENSSBOP00000009714	577 (aa)	XP_003940176	A0A2K6SQQ3

Gene Model

Click here to download ENSSBOG00000021649's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000021649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000021649	CSTF2	99	69.600	ENSSBOG00000022638	CSTF2T	99	69.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000021649	CSTF2	100	98.995	ENSG00000101811	CSTF2	100	98.995	Homo_sapiens
ENSSBOG00000021649	CSTF2	80	82.787	ENSAPOG00000005630	cstf2	97	61.307	Acanthochromis_polyacanthus
ENSSBOG00000021649	CSTF2	100	95.033	ENSAMEG00000002082	CSTF2	100	95.033	Ailuropoda_melanoleuca
ENSSBOG00000021649	CSTF2	80	82.231	ENSACIG00000012852	cstf2	97	73.868	Amphilophus_citrinellus
ENSSBOG00000021649	CSTF2	81	79.681	ENSAOCG00000020905	cstf2	97	76.703	Amphiprion_ocellaris
ENSSBOG00000021649	CSTF2	80	81.148	ENSAPEG00000006526	cstf2	97	75.532	Amphiprion_percula
ENSSBOG00000021649	CSTF2	84	80.247	ENSATEG00000018186	cstf2	96	76.344	Anabas_testudineus
ENSSBOG00000021649	CSTF2	97	78.425	ENSAPLG00000007255	CSTF2	98	77.966	Anas_platyrhynchos
ENSSBOG00000021649	CSTF2	100	99.457	ENSANAG00000022342	CSTF2	100	99.457	Aotus_nancymaae
ENSSBOG00000021649	CSTF2	99	58.478	ENSACLG00000000779	cstf2	92	78.229	Astatotilapia_calliptera
ENSSBOG00000021649	CSTF2	81	93.548	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSSBOG00000021649	CSTF2	100	95.101	ENSBTAG00000003547	CSTF2	100	95.101	Bos_taurus
ENSSBOG00000021649	CSTF2	100	99.665	ENSCJAG00000004422	CSTF2	100	99.665	Callithrix_jacchus
ENSSBOG00000021649	CSTF2	100	95.494	ENSCAFG00000017551	CSTF2	100	95.494	Canis_familiaris
ENSSBOG00000021649	CSTF2	100	95.847	ENSCAFG00020007619	CSTF2	100	95.847	Canis_lupus_dingo
ENSSBOG00000021649	CSTF2	100	95.439	ENSCHIG00000016994	CSTF2	100	95.439	Capra_hircus
ENSSBOG00000021649	CSTF2	100	97.487	ENSTSYG00000006529	CSTF2	100	97.487	Carlito_syrichta
ENSSBOG00000021649	CSTF2	100	95.142	ENSCPOG00000015255	CSTF2	100	95.142	Cavia_porcellus
ENSSBOG00000021649	CSTF2	100	99.819	ENSCCAG00000032975	CSTF2	100	99.819	Cebus_capucinus
ENSSBOG00000021649	CSTF2	100	98.732	ENSCATG00000022835	CSTF2	100	98.732	Cercocebus_atys
ENSSBOG00000021649	CSTF2	100	95.142	ENSCLAG00000001904	CSTF2	100	95.142	Chinchilla_lanigera
ENSSBOG00000021649	CSTF2	100	98.827	ENSCSAG00000010360	CSTF2	100	98.827	Chlorocebus_sabaeus
ENSSBOG00000021649	CSTF2	70	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSSBOG00000021649	CSTF2	100	76.205	ENSCPBG00000014293	CSTF2	100	75.963	Chrysemys_picta_bellii
ENSSBOG00000021649	CSTF2	100	98.913	ENSCANG00000030612	CSTF2	100	98.913	Colobus_angolensis_palliatus
ENSSBOG00000021649	CSTF2	100	92.069	ENSCGRG00001023023	Cstf2	100	92.069	Cricetulus_griseus_chok1gshd
ENSSBOG00000021649	CSTF2	100	88.966	ENSCGRG00000003897	Cstf2	100	88.966	Cricetulus_griseus_crigri
ENSSBOG00000021649	CSTF2	80	82.988	ENSCVAG00000005731	cstf2	95	77.007	Cyprinodon_variegatus
ENSSBOG00000021649	CSTF2	74	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSSBOG00000021649	CSTF2	100	92.055	ENSDORG00000007195	Cstf2	100	92.055	Dipodomys_ordii
ENSSBOG00000021649	CSTF2	74	91.892	ENSETEG00000004931	CSTF2	68	91.892	Echinops_telfairi
ENSSBOG00000021649	CSTF2	100	96.315	ENSEASG00005001216	CSTF2	100	96.315	Equus_asinus_asinus
ENSSBOG00000021649	CSTF2	100	96.315	ENSECAG00000009325	CSTF2	100	96.315	Equus_caballus
ENSSBOG00000021649	CSTF2	100	96.147	ENSFCAG00000007000	CSTF2	100	96.147	Felis_catus
ENSSBOG00000021649	CSTF2	92	77.128	ENSFALG00000003859	CSTF2	100	77.305	Ficedula_albicollis
ENSSBOG00000021649	CSTF2	100	96.326	ENSFDAG00000002416	CSTF2	100	96.326	Fukomys_damarensis
ENSSBOG00000021649	CSTF2	87	81.148	ENSFHEG00000017065	cstf2	93	62.500	Fundulus_heteroclitus
ENSSBOG00000021649	CSTF2	79	77.966	ENSGMOG00000005145	cstf2	99	58.824	Gadus_morhua
ENSSBOG00000021649	CSTF2	100	78.328	ENSGALG00000006760	CSTF2	100	84.667	Gallus_gallus
ENSSBOG00000021649	CSTF2	81	79.920	ENSGAFG00000020027	cstf2	96	61.279	Gambusia_affinis
ENSSBOG00000021649	CSTF2	99	56.055	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSSBOG00000021649	CSTF2	100	78.150	ENSGAGG00000006037	CSTF2	100	78.628	Gopherus_agassizii
ENSSBOG00000021649	CSTF2	100	99.094	ENSGGOG00000022267	CSTF2	100	99.094	Gorilla_gorilla
ENSSBOG00000021649	CSTF2	99	58.076	ENSHBUG00000016183	cstf2	92	78.148	Haplochromis_burtoni
ENSSBOG00000021649	CSTF2	100	81.629	ENSHGLG00000013455	-	100	81.629	Heterocephalus_glaber_female
ENSSBOG00000021649	CSTF2	100	96.014	ENSHGLG00000000659	-	100	96.014	Heterocephalus_glaber_female
ENSSBOG00000021649	CSTF2	100	96.014	ENSHGLG00100001130	-	100	96.014	Heterocephalus_glaber_male
ENSSBOG00000021649	CSTF2	100	81.802	ENSHGLG00100015391	-	100	81.802	Heterocephalus_glaber_male
ENSSBOG00000021649	CSTF2	80	81.967	ENSHCOG00000005157	cstf2	98	75.258	Hippocampus_comes
ENSSBOG00000021649	CSTF2	100	59.967	ENSIPUG00000017839	cstf2	99	65.618	Ictalurus_punctatus
ENSSBOG00000021649	CSTF2	100	95.147	ENSSTOG00000023445	CSTF2	100	95.147	Ictidomys_tridecemlineatus
ENSSBOG00000021649	CSTF2	100	93.761	ENSJJAG00000020507	Cstf2	100	93.761	Jaculus_jaculus
ENSSBOG00000021649	CSTF2	80	81.743	ENSKMAG00000001068	cstf2	95	76.241	Kryptolebias_marmoratus
ENSSBOG00000021649	CSTF2	63	94.915	ENSLBEG00000028720	cstf2	87	89.062	Labrus_bergylta
ENSSBOG00000021649	CSTF2	99	68.863	ENSLACG00000015927	CSTF2	99	67.810	Latimeria_chalumnae
ENSSBOG00000021649	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	64.164	Lepisosteus_oculatus
ENSSBOG00000021649	CSTF2	100	91.625	ENSLAFG00000000474	CSTF2	100	91.625	Loxodonta_africana
ENSSBOG00000021649	CSTF2	100	98.913	ENSMFAG00000043888	CSTF2	100	98.913	Macaca_fascicularis
ENSSBOG00000021649	CSTF2	100	98.913	ENSMMUG00000013008	CSTF2	100	98.913	Macaca_mulatta
ENSSBOG00000021649	CSTF2	100	98.913	ENSMNEG00000041824	CSTF2	100	98.913	Macaca_nemestrina
ENSSBOG00000021649	CSTF2	100	98.913	ENSMLEG00000036870	CSTF2	100	98.913	Mandrillus_leucophaeus
ENSSBOG00000021649	CSTF2	78	79.399	ENSMAMG00000020364	cstf2	96	73.684	Mastacembelus_armatus
ENSSBOG00000021649	CSTF2	99	58.478	ENSMZEG00005007200	cstf2	95	78.229	Maylandia_zebra
ENSSBOG00000021649	CSTF2	93	68.719	ENSMGAG00000004139	CSTF2	100	84.064	Meleagris_gallopavo
ENSSBOG00000021649	CSTF2	100	92.414	ENSMAUG00000000965	Cstf2	100	92.414	Mesocricetus_auratus
ENSSBOG00000021649	CSTF2	100	96.166	ENSMICG00000014121	CSTF2	100	96.166	Microcebus_murinus
ENSSBOG00000021649	CSTF2	100	91.034	ENSMOCG00000008081	Cstf2	100	91.034	Microtus_ochrogaster
ENSSBOG00000021649	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	55.615	Mola_mola
ENSSBOG00000021649	CSTF2	100	80.066	ENSMODG00000011785	CSTF2	100	81.697	Monodelphis_domestica
ENSSBOG00000021649	CSTF2	100	92.846	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.846	Mus_caroli
ENSSBOG00000021649	CSTF2	100	92.414	ENSMUSG00000031256	Cstf2	100	92.414	Mus_musculus
ENSSBOG00000021649	CSTF2	100	92.834	MGP_PahariEiJ_G0031923	Cstf2	100	92.994	Mus_pahari
ENSSBOG00000021649	CSTF2	100	92.846	MGP_SPRETEiJ_G0034548	Cstf2	100	92.846	Mus_spretus
ENSSBOG00000021649	CSTF2	100	94.770	ENSMPUG00000002339	CSTF2	100	94.770	Mustela_putorius_furo
ENSSBOG00000021649	CSTF2	100	93.323	ENSMLUG00000004598	CSTF2	98	93.323	Myotis_lucifugus
ENSSBOG00000021649	CSTF2	100	94.301	ENSNGAG00000021985	Cstf2	100	94.473	Nannospalax_galili
ENSSBOG00000021649	CSTF2	92	60.097	ENSNBRG00000021694	cstf2	100	57.914	Neolamprologus_brichardi
ENSSBOG00000021649	CSTF2	100	98.913	ENSNLEG00000007510	CSTF2	100	98.913	Nomascus_leucogenys
ENSSBOG00000021649	CSTF2	100	81.109	ENSMEUG00000011186	-	100	83.189	Notamacropus_eugenii
ENSSBOG00000021649	CSTF2	91	79.087	ENSMEUG00000014025	-	100	80.608	Notamacropus_eugenii
ENSSBOG00000021649	CSTF2	100	77.296	ENSMEUG00000007875	-	100	78.683	Notamacropus_eugenii
ENSSBOG00000021649	CSTF2	90	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSSBOG00000021649	CSTF2	100	94.627	ENSODEG00000002059	CSTF2	100	94.627	Octodon_degus
ENSSBOG00000021649	CSTF2	93	79.600	ENSONIG00000002631	cstf2	87	75.812	Oreochromis_niloticus
ENSSBOG00000021649	CSTF2	87	98.039	ENSOANG00000004208	CSTF2	87	88.571	Ornithorhynchus_anatinus
ENSSBOG00000021649	CSTF2	100	94.454	ENSOCUG00000010468	CSTF2	100	94.454	Oryctolagus_cuniculus
ENSSBOG00000021649	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	59.002	Oryzias_latipes
ENSSBOG00000021649	CSTF2	86	80.913	ENSORLG00020021917	cstf2	97	59.358	Oryzias_latipes_hni
ENSSBOG00000021649	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	59.002	Oryzias_latipes_hsok
ENSSBOG00000021649	CSTF2	79	81.328	ENSOMEG00000015507	cstf2	97	73.540	Oryzias_melastigma
ENSSBOG00000021649	CSTF2	100	95.072	ENSOGAG00000011192	CSTF2	100	93.959	Otolemur_garnettii
ENSSBOG00000021649	CSTF2	100	95.118	ENSOARG00000001022	CSTF2	100	95.118	Ovis_aries
ENSSBOG00000021649	CSTF2	100	99.094	ENSPPAG00000031804	CSTF2	100	99.094	Pan_paniscus
ENSSBOG00000021649	CSTF2	100	96.315	ENSPPRG00000022492	CSTF2	100	96.315	Panthera_pardus
ENSSBOG00000021649	CSTF2	100	95.980	ENSPTIG00000009922	CSTF2	100	95.980	Panthera_tigris_altaica
ENSSBOG00000021649	CSTF2	100	99.094	ENSPTRG00000022090	CSTF2	100	99.094	Pan_troglodytes
ENSSBOG00000021649	CSTF2	100	98.913	ENSPANG00000002303	CSTF2	100	98.913	Papio_anubis
ENSSBOG00000021649	CSTF2	99	62.857	ENSPKIG00000005033	cstf2	97	60.727	Paramormyrops_kingsleyae
ENSSBOG00000021649	CSTF2	99	58.217	ENSPMGG00000006534	cstf2	97	73.958	Periophthalmus_magnuspinnatus
ENSSBOG00000021649	CSTF2	100	91.379	ENSPEMG00000019415	Cstf2	100	91.379	Peromyscus_maniculatus_bairdii
ENSSBOG00000021649	CSTF2	100	81.126	ENSPCIG00000002989	CSTF2	100	82.102	Phascolarctos_cinereus
ENSSBOG00000021649	CSTF2	81	80.321	ENSPLAG00000011176	cstf2	96	76.642	Poecilia_latipinna
ENSSBOG00000021649	CSTF2	81	80.321	ENSPMEG00000017743	cstf2	96	75.912	Poecilia_mexicana
ENSSBOG00000021649	CSTF2	94	62.500	ENSPREG00000011481	cstf2	97	59.792	Poecilia_reticulata
ENSSBOG00000021649	CSTF2	100	98.995	ENSPPYG00000020541	CSTF2	100	98.995	Pongo_abelii
ENSSBOG00000021649	CSTF2	100	97.464	ENSPCOG00000027744	CSTF2	100	97.464	Propithecus_coquereli
ENSSBOG00000021649	CSTF2	85	93.571	ENSPVAG00000008342	CSTF2	96	93.571	Pteropus_vampyrus
ENSSBOG00000021649	CSTF2	59	91.781	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSSBOG00000021649	CSTF2	99	61.214	ENSPNAG00000018887	cstf2	97	62.144	Pygocentrus_nattereri
ENSSBOG00000021649	CSTF2	100	91.897	ENSRNOG00000048025	Cstf2	100	91.897	Rattus_norvegicus
ENSSBOG00000021649	CSTF2	100	97.101	ENSRBIG00000030745	CSTF2	100	97.101	Rhinopithecus_bieti
ENSSBOG00000021649	CSTF2	100	98.913	ENSRROG00000045042	CSTF2	100	98.913	Rhinopithecus_roxellana
ENSSBOG00000021649	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	82.986	Sarcophilus_harrisii
ENSSBOG00000021649	CSTF2	99	63.787	ENSSFOG00015006348	cstf2	98	63.727	Scleropages_formosus
ENSSBOG00000021649	CSTF2	79	83.817	ENSSMAG00000013463	cstf2	97	59.337	Scophthalmus_maximus
ENSSBOG00000021649	CSTF2	100	64.955	ENSSPUG00000005288	-	99	85.859	Sphenodon_punctatus
ENSSBOG00000021649	CSTF2	100	95.142	ENSSSCG00000012486	CSTF2	100	96.633	Sus_scrofa
ENSSBOG00000021649	CSTF2	100	78.741	ENSTGUG00000002253	CSTF2	100	78.912	Taeniopygia_guttata
ENSSBOG00000021649	CSTF2	99	59.201	ENSTNIG00000016860	cstf2	99	59.337	Tetraodon_nigroviridis
ENSSBOG00000021649	CSTF2	57	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSSBOG00000021649	CSTF2	100	96.360	ENSTTRG00000013556	CSTF2	100	96.360	Tursiops_truncatus
ENSSBOG00000021649	CSTF2	100	95.721	ENSUAMG00000026605	CSTF2	100	95.721	Ursus_americanus
ENSSBOG00000021649	CSTF2	100	89.189	ENSUMAG00000012417	CSTF2	100	97.232	Ursus_maritimus
ENSSBOG00000021649	CSTF2	73	95.918	ENSVPAG00000006466	CSTF2	72	95.918	Vicugna_pacos
ENSSBOG00000021649	CSTF2	100	95.667	ENSVVUG00000004717	CSTF2	100	95.667	Vulpes_vulpes
ENSSBOG00000021649	CSTF2	82	92.188	ENSXETG00000009642	cstf2	100	65.812	Xenopus_tropicalis
ENSSBOG00000021649	CSTF2	88	76.829	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSSBOG00000021649	CSTF2	95	62.245	ENSXMAG00000013524	cstf2	96	75.180	Xiphophorus_maculatus