EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000021930 (Gene tree)
Gene ID: 101042738
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 73964 bases
Position: chrJH378110.1:45408377-45482340
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000010188	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSSBOP00000010176	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSSBOP00000010197	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSSBOP00000010176	RRM_1	PF00076.22	9.1e-40	1	3
ENSSBOP00000010176	RRM_1	PF00076.22	9.1e-40	2	3
ENSSBOP00000010176	RRM_1	PF00076.22	9.1e-40	3	3
ENSSBOP00000010197	RRM_1	PF00076.22	1e-39	1	3
ENSSBOP00000010197	RRM_1	PF00076.22	1e-39	2	3
ENSSBOP00000010197	RRM_1	PF00076.22	1e-39	3	3
ENSSBOP00000010188	RRM_1	PF00076.22	1.8e-31	1	3
ENSSBOP00000010188	RRM_1	PF00076.22	1.8e-31	2	3
ENSSBOP00000010188	RRM_1	PF00076.22	1.8e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000026947	A1CF-201	2077	XM_003922446	ENSSBOP00000010176	593 (aa)	XP_003922495	A0A2K6SS30
ENSSBOT00000026968	A1CF-203	1806	-	ENSSBOP00000010197	601 (aa)	-	A0A2K6SS33
ENSSBOT00000026959	A1CF-202	1786	-	ENSSBOP00000010188	501 (aa)	-	A0A2K6SS20

Gene Model

Click here to download ENSSBOG00000021930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000021930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000021930	A1CF	53	52.215	ENSSBOG00000026580	-	53	52.215
ENSSBOG00000021930	A1CF	69	70.701	ENSSBOG00000033028	RBM46	96	70.701
ENSSBOG00000021930	A1CF	75	58.681	ENSSBOG00000028475	RBM47	88	68.300
ENSSBOG00000021930	A1CF	52	52.427	ENSSBOG00000022984	SYNCRIP	77	42.482

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000021930	A1CF	100	98.487	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSSBOG00000021930	A1CF	100	73.877	ENSAPOG00000008259	a1cf	100	73.877	Acanthochromis_polyacanthus
ENSSBOG00000021930	A1CF	100	94.958	ENSAMEG00000000523	A1CF	100	95.798	Ailuropoda_melanoleuca
ENSSBOG00000021930	A1CF	100	76.154	ENSACIG00000008632	a1cf	100	77.162	Amphilophus_citrinellus
ENSSBOG00000021930	A1CF	100	74.548	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSSBOG00000021930	A1CF	100	75.534	ENSAPEG00000009537	a1cf	100	76.355	Amphiprion_percula
ENSSBOG00000021930	A1CF	100	76.493	ENSATEG00000013720	a1cf	100	77.614	Anabas_testudineus
ENSSBOG00000021930	A1CF	100	89.094	ENSAPLG00000002964	A1CF	100	89.094	Anas_platyrhynchos
ENSSBOG00000021930	A1CF	100	84.294	ENSACAG00000015269	A1CF	100	83.697	Anolis_carolinensis
ENSSBOG00000021930	A1CF	100	98.807	ENSANAG00000019974	A1CF	100	98.673	Aotus_nancymaae
ENSSBOG00000021930	A1CF	100	73.443	ENSACLG00000017428	a1cf	100	75.123	Astatotilapia_calliptera
ENSSBOG00000021930	A1CF	100	79.079	ENSAMXG00000018180	a1cf	100	75.537	Astyanax_mexicanus
ENSSBOG00000021930	A1CF	100	95.626	ENSBTAG00000021195	A1CF	100	95.788	Bos_taurus
ENSSBOG00000021930	A1CF	100	99.328	ENSCJAG00000005045	A1CF	100	99.328	Callithrix_jacchus
ENSSBOG00000021930	A1CF	100	95.798	ENSCAFG00000015581	A1CF	100	95.798	Canis_familiaris
ENSSBOG00000021930	A1CF	100	95.798	ENSCAFG00020026421	A1CF	100	95.798	Canis_lupus_dingo
ENSSBOG00000021930	A1CF	100	95.798	ENSCHIG00000020411	A1CF	100	95.798	Capra_hircus
ENSSBOG00000021930	A1CF	100	97.217	ENSTSYG00000001755	A1CF	100	95.907	Carlito_syrichta
ENSSBOG00000021930	A1CF	100	96.694	ENSCAPG00000017386	A1CF	89	96.694	Cavia_aperea
ENSSBOG00000021930	A1CF	100	96.639	ENSCPOG00000009807	A1CF	100	96.639	Cavia_porcellus
ENSSBOG00000021930	A1CF	100	98.992	ENSCCAG00000018168	A1CF	100	98.992	Cebus_capucinus
ENSSBOG00000021930	A1CF	100	97.813	ENSCATG00000043715	A1CF	100	96.807	Cercocebus_atys
ENSSBOG00000021930	A1CF	100	96.141	ENSCLAG00000010424	A1CF	100	96.141	Chinchilla_lanigera
ENSSBOG00000021930	A1CF	100	98.151	ENSCSAG00000007032	A1CF	100	98.151	Chlorocebus_sabaeus
ENSSBOG00000021930	A1CF	100	94.257	ENSCHOG00000009089	A1CF	99	91.030	Choloepus_hoffmanni
ENSSBOG00000021930	A1CF	100	88.926	ENSCPBG00000026464	A1CF	100	88.777	Chrysemys_picta_bellii
ENSSBOG00000021930	A1CF	100	98.151	ENSCANG00000038032	A1CF	100	98.151	Colobus_angolensis_palliatus
ENSSBOG00000021930	A1CF	100	94.790	ENSCGRG00001017413	A1cf	100	94.790	Cricetulus_griseus_chok1gshd
ENSSBOG00000021930	A1CF	100	94.118	ENSCGRG00000017332	A1cf	100	94.118	Cricetulus_griseus_crigri
ENSSBOG00000021930	A1CF	100	75.249	ENSCSEG00000002361	a1cf	100	76.578	Cynoglossus_semilaevis
ENSSBOG00000021930	A1CF	100	75.337	ENSCVAG00000010520	a1cf	100	76.797	Cyprinodon_variegatus
ENSSBOG00000021930	A1CF	100	79.290	ENSDARG00000002968	a1cf	100	79.967	Danio_rerio
ENSSBOG00000021930	A1CF	100	95.462	ENSDNOG00000002829	A1CF	100	95.462	Dasypus_novemcinctus
ENSSBOG00000021930	A1CF	82	98.049	ENSETEG00000012527	A1CF	84	90.753	Echinops_telfairi
ENSSBOG00000021930	A1CF	100	97.320	ENSEASG00005012924	A1CF	100	97.320	Equus_asinus_asinus
ENSSBOG00000021930	A1CF	100	96.817	ENSECAG00000010424	A1CF	100	96.817	Equus_caballus
ENSSBOG00000021930	A1CF	90	81.898	ENSEEUG00000000013	A1CF	98	81.538	Erinaceus_europaeus
ENSSBOG00000021930	A1CF	100	78.869	ENSELUG00000003159	a1cf	100	79.700	Esox_lucius
ENSSBOG00000021930	A1CF	100	93.042	ENSFCAG00000011179	A1CF	100	93.277	Felis_catus
ENSSBOG00000021930	A1CF	100	86.706	ENSFALG00000013183	A1CF	100	86.242	Ficedula_albicollis
ENSSBOG00000021930	A1CF	100	95.030	ENSFDAG00000019371	A1CF	100	94.454	Fukomys_damarensis
ENSSBOG00000021930	A1CF	100	75.530	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSSBOG00000021930	A1CF	100	72.185	ENSGMOG00000018943	a1cf	100	72.185	Gadus_morhua
ENSSBOG00000021930	A1CF	100	86.328	ENSGALG00000003765	A1CF	97	88.496	Gallus_gallus
ENSSBOG00000021930	A1CF	100	70.559	ENSGAFG00000014868	a1cf	100	71.546	Gambusia_affinis
ENSSBOG00000021930	A1CF	100	74.507	ENSGACG00000010241	a1cf	100	75.000	Gasterosteus_aculeatus
ENSSBOG00000021930	A1CF	100	86.328	ENSGAGG00000016508	A1CF	98	88.225	Gopherus_agassizii
ENSSBOG00000021930	A1CF	100	98.655	ENSGGOG00000009670	A1CF	100	98.655	Gorilla_gorilla
ENSSBOG00000021930	A1CF	100	75.041	ENSHBUG00000021959	a1cf	100	76.998	Haplochromis_burtoni
ENSSBOG00000021930	A1CF	100	96.303	ENSHGLG00000008955	A1CF	100	96.303	Heterocephalus_glaber_female
ENSSBOG00000021930	A1CF	100	95.630	ENSHGLG00100000518	A1CF	100	95.630	Heterocephalus_glaber_male
ENSSBOG00000021930	A1CF	100	70.195	ENSHCOG00000017669	a1cf	100	73.008	Hippocampus_comes
ENSSBOG00000021930	A1CF	89	83.396	ENSIPUG00000010367	a1cf	96	83.396	Ictalurus_punctatus
ENSSBOG00000021930	A1CF	100	77.398	ENSKMAG00000006568	a1cf	100	78.211	Kryptolebias_marmoratus
ENSSBOG00000021930	A1CF	99	75.693	ENSLBEG00000020994	a1cf	98	77.504	Labrus_bergylta
ENSSBOG00000021930	A1CF	100	81.854	ENSLACG00000008061	A1CF	100	81.469	Latimeria_chalumnae
ENSSBOG00000021930	A1CF	100	82.500	ENSLOCG00000006302	a1cf	100	82.333	Lepisosteus_oculatus
ENSSBOG00000021930	A1CF	100	94.790	ENSLAFG00000015462	A1CF	100	94.958	Loxodonta_africana
ENSSBOG00000021930	A1CF	100	98.211	ENSMFAG00000035948	A1CF	100	97.143	Macaca_fascicularis
ENSSBOG00000021930	A1CF	100	98.211	ENSMMUG00000007077	A1CF	100	97.143	Macaca_mulatta
ENSSBOG00000021930	A1CF	100	97.813	ENSMNEG00000031454	A1CF	100	96.807	Macaca_nemestrina
ENSSBOG00000021930	A1CF	100	98.151	ENSMLEG00000037223	A1CF	100	98.151	Mandrillus_leucophaeus
ENSSBOG00000021930	A1CF	100	73.650	ENSMAMG00000010402	a1cf	100	75.777	Mastacembelus_armatus
ENSSBOG00000021930	A1CF	100	76.421	ENSMZEG00005013245	a1cf	100	77.167	Maylandia_zebra
ENSSBOG00000021930	A1CF	100	88.610	ENSMGAG00000001507	A1CF	100	88.610	Meleagris_gallopavo
ENSSBOG00000021930	A1CF	100	94.286	ENSMAUG00000007422	A1cf	100	94.286	Mesocricetus_auratus
ENSSBOG00000021930	A1CF	100	96.245	ENSMICG00000003377	A1CF	100	95.485	Microcebus_murinus
ENSSBOG00000021930	A1CF	100	94.286	ENSMOCG00000021536	A1cf	100	94.286	Microtus_ochrogaster
ENSSBOG00000021930	A1CF	100	72.008	ENSMMOG00000009422	a1cf	100	69.787	Mola_mola
ENSSBOG00000021930	A1CF	92	89.945	ENSMODG00000016478	A1CF	99	89.945	Monodelphis_domestica
ENSSBOG00000021930	A1CF	100	72.408	ENSMALG00000012992	a1cf	100	72.074	Monopterus_albus
ENSSBOG00000021930	A1CF	100	93.613	MGP_CAROLIEiJ_G0022873	A1cf	100	93.613	Mus_caroli
ENSSBOG00000021930	A1CF	100	93.613	ENSMUSG00000052595	A1cf	99	96.316	Mus_musculus
ENSSBOG00000021930	A1CF	100	92.773	MGP_PahariEiJ_G0014366	A1cf	100	92.773	Mus_pahari
ENSSBOG00000021930	A1CF	100	93.592	MGP_SPRETEiJ_G0023792	A1cf	100	93.592	Mus_spretus
ENSSBOG00000021930	A1CF	100	90.084	ENSMPUG00000016971	A1CF	100	90.084	Mustela_putorius_furo
ENSSBOG00000021930	A1CF	100	94.958	ENSMLUG00000016071	A1CF	100	94.958	Myotis_lucifugus
ENSSBOG00000021930	A1CF	100	95.462	ENSNGAG00000015136	A1cf	100	95.462	Nannospalax_galili
ENSSBOG00000021930	A1CF	100	75.385	ENSNBRG00000001712	a1cf	100	77.325	Neolamprologus_brichardi
ENSSBOG00000021930	A1CF	100	99.328	ENSNLEG00000012028	A1CF	100	99.328	Nomascus_leucogenys
ENSSBOG00000021930	A1CF	100	90.476	ENSMEUG00000015909	A1CF	100	89.876	Notamacropus_eugenii
ENSSBOG00000021930	A1CF	89	85.714	ENSOPRG00000010667	A1CF	98	85.741	Ochotona_princeps
ENSSBOG00000021930	A1CF	100	75.769	ENSONIG00000019105	a1cf	100	76.835	Oreochromis_niloticus
ENSSBOG00000021930	A1CF	78	89.079	ENSOANG00000007360	A1CF	99	89.079	Ornithorhynchus_anatinus
ENSSBOG00000021930	A1CF	100	95.833	ENSOCUG00000011587	A1CF	100	94.799	Oryctolagus_cuniculus
ENSSBOG00000021930	A1CF	100	74.262	ENSORLG00000013342	a1cf	100	73.625	Oryzias_latipes
ENSSBOG00000021930	A1CF	100	75.367	ENSORLG00020000586	a1cf	100	75.856	Oryzias_latipes_hni
ENSSBOG00000021930	A1CF	100	75.204	ENSORLG00015018569	a1cf	100	75.693	Oryzias_latipes_hsok
ENSSBOG00000021930	A1CF	100	75.483	ENSOMEG00000013531	a1cf	100	75.123	Oryzias_melastigma
ENSSBOG00000021930	A1CF	100	95.294	ENSOGAG00000012884	A1CF	100	95.798	Otolemur_garnettii
ENSSBOG00000021930	A1CF	100	95.798	ENSOARG00000013695	A1CF	100	95.798	Ovis_aries
ENSSBOG00000021930	A1CF	100	97.015	ENSPPAG00000028115	A1CF	100	99.393	Pan_paniscus
ENSSBOG00000021930	A1CF	100	94.286	ENSPPRG00000012180	A1CF	100	94.958	Panthera_pardus
ENSSBOG00000021930	A1CF	100	94.286	ENSPTIG00000021223	A1CF	100	94.958	Panthera_tigris_altaica
ENSSBOG00000021930	A1CF	100	98.487	ENSPTRG00000002508	A1CF	100	98.487	Pan_troglodytes
ENSSBOG00000021930	A1CF	100	98.211	ENSPANG00000021988	A1CF	100	97.143	Papio_anubis
ENSSBOG00000021930	A1CF	100	80.366	ENSPKIG00000025176	a1cf	100	80.366	Paramormyrops_kingsleyae
ENSSBOG00000021930	A1CF	100	87.897	ENSPSIG00000010318	A1CF	100	87.248	Pelodiscus_sinensis
ENSSBOG00000021930	A1CF	88	71.238	ENSPMGG00000013359	a1cf	99	66.892	Periophthalmus_magnuspinnatus
ENSSBOG00000021930	A1CF	100	94.790	ENSPEMG00000015021	A1cf	100	94.790	Peromyscus_maniculatus_bairdii
ENSSBOG00000021930	A1CF	100	90.079	ENSPCIG00000002175	A1CF	100	89.765	Phascolarctos_cinereus
ENSSBOG00000021930	A1CF	100	76.547	ENSPFOG00000007437	-	100	78.013	Poecilia_formosa
ENSSBOG00000021930	A1CF	100	76.710	ENSPFOG00000006683	a1cf	100	78.176	Poecilia_formosa
ENSSBOG00000021930	A1CF	100	75.407	ENSPLAG00000000026	a1cf	100	76.873	Poecilia_latipinna
ENSSBOG00000021930	A1CF	100	75.407	ENSPLAG00000001210	-	100	76.873	Poecilia_latipinna
ENSSBOG00000021930	A1CF	100	67.974	ENSPMEG00000000921	a1cf	100	69.444	Poecilia_mexicana
ENSSBOG00000021930	A1CF	100	69.118	ENSPMEG00000015529	-	100	70.588	Poecilia_mexicana
ENSSBOG00000021930	A1CF	100	76.384	ENSPREG00000016298	a1cf	100	77.850	Poecilia_reticulata
ENSSBOG00000021930	A1CF	100	99.205	ENSPPYG00000002819	A1CF	100	97.815	Pongo_abelii
ENSSBOG00000021930	A1CF	92	74.839	ENSPCAG00000006463	A1CF	70	87.755	Procavia_capensis
ENSSBOG00000021930	A1CF	100	96.980	ENSPCOG00000024172	A1CF	100	96.980	Propithecus_coquereli
ENSSBOG00000021930	A1CF	100	76.346	ENSPNYG00000017944	a1cf	100	78.303	Pundamilia_nyererei
ENSSBOG00000021930	A1CF	100	81.641	ENSPNAG00000007704	a1cf	100	80.464	Pygocentrus_nattereri
ENSSBOG00000021930	A1CF	100	93.241	ENSRNOG00000033195	A1cf	100	92.605	Rattus_norvegicus
ENSSBOG00000021930	A1CF	100	97.018	ENSRBIG00000042892	A1CF	100	97.018	Rhinopithecus_bieti
ENSSBOG00000021930	A1CF	100	98.487	ENSRROG00000041398	A1CF	100	98.487	Rhinopithecus_roxellana
ENSSBOG00000021930	A1CF	100	89.765	ENSSHAG00000005096	A1CF	100	89.933	Sarcophilus_harrisii
ENSSBOG00000021930	A1CF	100	80.039	ENSSFOG00015011774	a1cf	100	79.436	Scleropages_formosus
ENSSBOG00000021930	A1CF	100	76.059	ENSSMAG00000013271	a1cf	100	76.384	Scophthalmus_maximus
ENSSBOG00000021930	A1CF	100	76.539	ENSSDUG00000013930	a1cf	100	77.537	Seriola_dumerili
ENSSBOG00000021930	A1CF	100	69.868	ENSSLDG00000004290	a1cf	100	70.530	Seriola_lalandi_dorsalis
ENSSBOG00000021930	A1CF	100	84.493	ENSSARG00000005940	A1CF	100	81.260	Sorex_araneus
ENSSBOG00000021930	A1CF	100	85.965	ENSSPUG00000006797	A1CF	99	83.775	Sphenodon_punctatus
ENSSBOG00000021930	A1CF	100	96.471	ENSSSCG00000010431	A1CF	100	96.471	Sus_scrofa
ENSSBOG00000021930	A1CF	100	87.625	ENSTGUG00000005090	A1CF	100	87.625	Taeniopygia_guttata
ENSSBOG00000021930	A1CF	100	74.878	ENSTRUG00000001982	a1cf	100	74.878	Takifugu_rubripes
ENSSBOG00000021930	A1CF	100	75.447	ENSTNIG00000003580	a1cf	100	75.447	Tetraodon_nigroviridis
ENSSBOG00000021930	A1CF	100	90.457	ENSTTRG00000013190	A1CF	100	87.562	Tursiops_truncatus
ENSSBOG00000021930	A1CF	100	94.831	ENSUAMG00000020065	A1CF	100	94.454	Ursus_americanus
ENSSBOG00000021930	A1CF	100	95.294	ENSUMAG00000011162	A1CF	100	95.462	Ursus_maritimus
ENSSBOG00000021930	A1CF	100	91.124	ENSVPAG00000006130	A1CF	99	80.565	Vicugna_pacos
ENSSBOG00000021930	A1CF	100	94.632	ENSVVUG00000002504	A1CF	100	94.286	Vulpes_vulpes
ENSSBOG00000021930	A1CF	100	78.833	ENSXETG00000006611	a1cf	100	78.667	Xenopus_tropicalis
ENSSBOG00000021930	A1CF	100	76.983	ENSXCOG00000003302	a1cf	100	77.705	Xiphophorus_couchianus
ENSSBOG00000021930	A1CF	100	77.869	ENSXMAG00000016703	a1cf	100	78.852	Xiphophorus_maculatus