EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000022353 (Gene tree)
Gene ID: 101027880
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 37014 bases
Position: chrJH378152.1:4618153-4655166
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011133	YTH	PF04146.15	6.9e-40	1	1
ENSSBOP00000011080	YTH	PF04146.15	1.1e-39	1	1
ENSSBOP00000011123	YTH	PF04146.15	1.1e-39	1	1
ENSSBOP00000011113	YTH	PF04146.15	1.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000027860	YTHDC1-201	3278	XM_003931899	ENSSBOP00000011080	710 (aa)	XP_003931948	A0A2K6SUL5
ENSSBOT00000027893	YTHDC1-202	3355	XM_003931898	ENSSBOP00000011113	736 (aa)	XP_003931947	A0A2K6SUP6
ENSSBOT00000027903	YTHDC1-203	2196	-	ENSSBOP00000011123	731 (aa)	-	A0A2K6SUQ6
ENSSBOT00000027913	YTHDC1-204	1623	-	ENSSBOP00000011133	540 (aa)	-	A0A2K6SUR8

Gene Model

Click here to download ENSSBOG00000022353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022353	YTHDC1	100	99.457	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSSBOG00000022353	YTHDC1	58	59.338	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSSBOG00000022353	YTHDC1	100	96.752	ENSAMEG00000005688	YTHDC1	100	96.752	Ailuropoda_melanoleuca
ENSSBOG00000022353	YTHDC1	64	69.531	ENSACIG00000019728	ythdc1	80	59.649	Amphilophus_citrinellus
ENSSBOG00000022353	YTHDC1	58	60.360	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSSBOG00000022353	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSSBOG00000022353	YTHDC1	96	82.692	ENSAPLG00000009921	YTHDC1	92	85.587	Anas_platyrhynchos
ENSSBOG00000022353	YTHDC1	96	81.226	ENSACAG00000009697	YTHDC1	93	82.577	Anolis_carolinensis
ENSSBOG00000022353	YTHDC1	100	99.577	ENSANAG00000001522	YTHDC1	100	99.577	Aotus_nancymaae
ENSSBOG00000022353	YTHDC1	92	53.411	ENSACLG00000019371	ythdc1	59	66.268	Astatotilapia_calliptera
ENSSBOG00000022353	YTHDC1	96	61.842	ENSAMXG00000006978	ythdc1	92	65.875	Astyanax_mexicanus
ENSSBOG00000022353	YTHDC1	100	96.744	ENSBTAG00000015572	YTHDC1	100	96.744	Bos_taurus
ENSSBOG00000022353	YTHDC1	100	100.000	ENSCJAG00000009934	YTHDC1	100	100.000	Callithrix_jacchus
ENSSBOG00000022353	YTHDC1	100	96.752	ENSCAFG00000002821	YTHDC1	100	96.752	Canis_familiaris
ENSSBOG00000022353	YTHDC1	100	96.752	ENSCAFG00020027112	YTHDC1	100	96.752	Canis_lupus_dingo
ENSSBOG00000022353	YTHDC1	99	96.269	ENSCHIG00000004810	YTHDC1	98	96.269	Capra_hircus
ENSSBOG00000022353	YTHDC1	100	99.296	ENSTSYG00000011668	YTHDC1	100	99.296	Carlito_syrichta
ENSSBOG00000022353	YTHDC1	98	72.420	ENSCAPG00000008722	YTHDC1	90	69.397	Cavia_aperea
ENSSBOG00000022353	YTHDC1	96	96.381	ENSCPOG00000010929	YTHDC1	100	90.986	Cavia_porcellus
ENSSBOG00000022353	YTHDC1	100	99.718	ENSCCAG00000035754	YTHDC1	100	99.718	Cebus_capucinus
ENSSBOG00000022353	YTHDC1	100	99.592	ENSCATG00000036320	YTHDC1	100	99.592	Cercocebus_atys
ENSSBOG00000022353	YTHDC1	99	97.796	ENSCLAG00000005482	YTHDC1	99	97.796	Chinchilla_lanigera
ENSSBOG00000022353	YTHDC1	100	98.505	ENSCSAG00000005252	YTHDC1	100	98.505	Chlorocebus_sabaeus
ENSSBOG00000022353	YTHDC1	96	85.221	ENSCPBG00000021965	YTHDC1	94	86.149	Chrysemys_picta_bellii
ENSSBOG00000022353	YTHDC1	100	99.718	ENSCANG00000004769	YTHDC1	100	99.718	Colobus_angolensis_palliatus
ENSSBOG00000022353	YTHDC1	100	97.418	ENSCGRG00001000816	Ythdc1	100	97.418	Cricetulus_griseus_chok1gshd
ENSSBOG00000022353	YTHDC1	99	97.290	ENSCGRG00000009807	Ythdc1	99	97.290	Cricetulus_griseus_crigri
ENSSBOG00000022353	YTHDC1	58	59.307	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSSBOG00000022353	YTHDC1	50	67.518	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSSBOG00000022353	YTHDC1	92	63.976	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSSBOG00000022353	YTHDC1	100	96.065	ENSDNOG00000004949	YTHDC1	100	96.065	Dasypus_novemcinctus
ENSSBOG00000022353	YTHDC1	99	98.624	ENSDORG00000013045	Ythdc1	100	98.573	Dipodomys_ordii
ENSSBOG00000022353	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSSBOG00000022353	YTHDC1	100	97.294	ENSEASG00005018383	YTHDC1	100	97.294	Equus_asinus_asinus
ENSSBOG00000022353	YTHDC1	100	96.888	ENSECAG00000018303	YTHDC1	100	97.734	Equus_caballus
ENSSBOG00000022353	YTHDC1	100	95.522	ENSEEUG00000015466	YTHDC1	100	95.522	Erinaceus_europaeus
ENSSBOG00000022353	YTHDC1	95	60.456	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSSBOG00000022353	YTHDC1	100	97.612	ENSFCAG00000026791	YTHDC1	100	97.612	Felis_catus
ENSSBOG00000022353	YTHDC1	68	88.063	ENSFALG00000006581	YTHDC1	87	92.124	Ficedula_albicollis
ENSSBOG00000022353	YTHDC1	99	97.714	ENSFDAG00000018560	YTHDC1	100	97.714	Fukomys_damarensis
ENSSBOG00000022353	YTHDC1	65	66.667	ENSFHEG00000001286	ythdc1	60	55.449	Fundulus_heteroclitus
ENSSBOG00000022353	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSSBOG00000022353	YTHDC1	99	84.701	ENSGALG00000035906	YTHDC1	90	84.888	Gallus_gallus
ENSSBOG00000022353	YTHDC1	67	66.058	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSSBOG00000022353	YTHDC1	58	62.326	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSSBOG00000022353	YTHDC1	96	85.385	ENSGAGG00000007108	YTHDC1	93	86.530	Gopherus_agassizii
ENSSBOG00000022353	YTHDC1	100	99.592	ENSGGOG00000021958	YTHDC1	100	99.592	Gorilla_gorilla
ENSSBOG00000022353	YTHDC1	92	53.606	ENSHBUG00000019288	ythdc1	59	66.268	Haplochromis_burtoni
ENSSBOG00000022353	YTHDC1	96	71.869	ENSHGLG00000003239	-	68	73.410	Heterocephalus_glaber_female
ENSSBOG00000022353	YTHDC1	100	97.554	ENSHGLG00000006319	-	100	97.554	Heterocephalus_glaber_female
ENSSBOG00000022353	YTHDC1	100	96.499	ENSHGLG00100001556	-	100	96.699	Heterocephalus_glaber_male
ENSSBOG00000022353	YTHDC1	96	69.923	ENSHGLG00100008060	-	68	71.456	Heterocephalus_glaber_male
ENSSBOG00000022353	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSSBOG00000022353	YTHDC1	96	64.000	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSSBOG00000022353	YTHDC1	100	99.185	ENSSTOG00000013652	YTHDC1	100	99.185	Ictidomys_tridecemlineatus
ENSSBOG00000022353	YTHDC1	96	93.269	ENSJJAG00000010268	Ythdc1	93	93.314	Jaculus_jaculus
ENSSBOG00000022353	YTHDC1	58	59.417	ENSKMAG00000006483	ythdc1	85	65.476	Kryptolebias_marmoratus
ENSSBOG00000022353	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSSBOG00000022353	YTHDC1	90	71.053	ENSLACG00000004893	YTHDC1	92	72.994	Latimeria_chalumnae
ENSSBOG00000022353	YTHDC1	93	73.431	ENSLOCG00000003045	ythdc1	92	87.028	Lepisosteus_oculatus
ENSSBOG00000022353	YTHDC1	100	97.147	ENSLAFG00000021592	YTHDC1	100	97.147	Loxodonta_africana
ENSSBOG00000022353	YTHDC1	100	99.728	ENSMFAG00000031927	YTHDC1	100	99.728	Macaca_fascicularis
ENSSBOG00000022353	YTHDC1	99	99.725	ENSMMUG00000002265	YTHDC1	100	99.588	Macaca_mulatta
ENSSBOG00000022353	YTHDC1	100	99.718	ENSMNEG00000033751	YTHDC1	100	99.718	Macaca_nemestrina
ENSSBOG00000022353	YTHDC1	100	99.590	ENSMLEG00000042147	YTHDC1	100	99.590	Mandrillus_leucophaeus
ENSSBOG00000022353	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSSBOG00000022353	YTHDC1	92	53.411	ENSMZEG00005023173	ythdc1	59	66.268	Maylandia_zebra
ENSSBOG00000022353	YTHDC1	96	81.382	ENSMGAG00000010391	YTHDC1	91	85.015	Meleagris_gallopavo
ENSSBOG00000022353	YTHDC1	100	97.147	ENSMAUG00000001286	Ythdc1	100	97.147	Mesocricetus_auratus
ENSSBOG00000022353	YTHDC1	100	98.507	ENSMICG00000034640	YTHDC1	100	98.507	Microcebus_murinus
ENSSBOG00000022353	YTHDC1	100	97.418	ENSMOCG00000020201	Ythdc1	100	97.418	Microtus_ochrogaster
ENSSBOG00000022353	YTHDC1	85	73.818	ENSMODG00000014337	-	95	69.802	Monodelphis_domestica
ENSSBOG00000022353	YTHDC1	65	56.904	ENSMODG00000009173	-	88	60.427	Monodelphis_domestica
ENSSBOG00000022353	YTHDC1	96	87.308	ENSMODG00000020754	-	92	87.537	Monodelphis_domestica
ENSSBOG00000022353	YTHDC1	96	51.058	ENSMODG00000010076	-	72	52.268	Monodelphis_domestica
ENSSBOG00000022353	YTHDC1	57	69.388	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSSBOG00000022353	YTHDC1	100	96.201	MGP_CAROLIEiJ_G0027347	Ythdc1	100	96.201	Mus_caroli
ENSSBOG00000022353	YTHDC1	100	97.151	ENSMUSG00000035851	Ythdc1	100	97.151	Mus_musculus
ENSSBOG00000022353	YTHDC1	100	97.422	MGP_PahariEiJ_G0017126	Ythdc1	100	97.422	Mus_pahari
ENSSBOG00000022353	YTHDC1	100	97.422	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.422	Mus_spretus
ENSSBOG00000022353	YTHDC1	93	72.464	ENSMPUG00000001743	YTHDC1	53	96.675	Mustela_putorius_furo
ENSSBOG00000022353	YTHDC1	99	96.419	ENSMLUG00000016300	YTHDC1	100	96.419	Myotis_lucifugus
ENSSBOG00000022353	YTHDC1	80	88.584	ENSNGAG00000024000	Ythdc1	93	96.445	Nannospalax_galili
ENSSBOG00000022353	YTHDC1	60	63.889	ENSNBRG00000007663	ythdc1	70	66.019	Neolamprologus_brichardi
ENSSBOG00000022353	YTHDC1	100	98.769	ENSNLEG00000009202	YTHDC1	100	98.769	Nomascus_leucogenys
ENSSBOG00000022353	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSSBOG00000022353	YTHDC1	75	99.150	ENSOPRG00000008986	YTHDC1	74	99.150	Ochotona_princeps
ENSSBOG00000022353	YTHDC1	100	97.183	ENSODEG00000001715	YTHDC1	100	97.183	Octodon_degus
ENSSBOG00000022353	YTHDC1	92	53.801	ENSONIG00000012651	ythdc1	59	66.746	Oreochromis_niloticus
ENSSBOG00000022353	YTHDC1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSSBOG00000022353	YTHDC1	93	81.168	ENSOCUG00000015886	YTHDC1	57	93.842	Oryctolagus_cuniculus
ENSSBOG00000022353	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSSBOG00000022353	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSSBOG00000022353	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	72	53.631	Oryzias_melastigma
ENSSBOG00000022353	YTHDC1	100	96.875	ENSOGAG00000003362	YTHDC1	100	96.875	Otolemur_garnettii
ENSSBOG00000022353	YTHDC1	100	96.744	ENSOARG00000008633	YTHDC1	100	96.744	Ovis_aries
ENSSBOG00000022353	YTHDC1	100	99.457	ENSPPAG00000041315	YTHDC1	100	99.457	Pan_paniscus
ENSSBOG00000022353	YTHDC1	100	97.832	ENSPPRG00000011979	YTHDC1	100	97.832	Panthera_pardus
ENSSBOG00000022353	YTHDC1	99	97.527	ENSPTIG00000015527	YTHDC1	100	97.527	Panthera_tigris_altaica
ENSSBOG00000022353	YTHDC1	100	99.457	ENSPTRG00000016105	YTHDC1	100	99.457	Pan_troglodytes
ENSSBOG00000022353	YTHDC1	100	99.592	ENSPANG00000021590	YTHDC1	100	99.592	Papio_anubis
ENSSBOG00000022353	YTHDC1	96	67.176	ENSPKIG00000018497	ythdc1	93	68.149	Paramormyrops_kingsleyae
ENSSBOG00000022353	YTHDC1	96	85.029	ENSPSIG00000002782	YTHDC1	92	85.905	Pelodiscus_sinensis
ENSSBOG00000022353	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSSBOG00000022353	YTHDC1	99	97.662	ENSPEMG00000013850	Ythdc1	100	97.571	Peromyscus_maniculatus_bairdii
ENSSBOG00000022353	YTHDC1	96	87.115	ENSPCIG00000006870	YTHDC1	92	88.110	Phascolarctos_cinereus
ENSSBOG00000022353	YTHDC1	50	65.693	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSSBOG00000022353	YTHDC1	58	58.482	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSSBOG00000022353	YTHDC1	50	65.693	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSSBOG00000022353	YTHDC1	67	63.370	ENSPREG00000016973	ythdc1	76	51.331	Poecilia_reticulata
ENSSBOG00000022353	YTHDC1	88	98.125	ENSPPYG00000014726	YTHDC1	100	98.125	Pongo_abelii
ENSSBOG00000022353	YTHDC1	76	100.000	ENSPCAG00000009607	YTHDC1	77	93.878	Procavia_capensis
ENSSBOG00000022353	YTHDC1	100	94.030	ENSPCOG00000019105	YTHDC1	100	94.030	Propithecus_coquereli
ENSSBOG00000022353	YTHDC1	100	94.595	ENSPVAG00000015551	YTHDC1	100	94.595	Pteropus_vampyrus
ENSSBOG00000022353	YTHDC1	92	53.411	ENSPNYG00000011687	ythdc1	59	66.268	Pundamilia_nyererei
ENSSBOG00000022353	YTHDC1	96	68.121	ENSPNAG00000028365	ythdc1	93	68.714	Pygocentrus_nattereri
ENSSBOG00000022353	YTHDC1	100	96.482	ENSRNOG00000001996	Ythdc1	100	96.482	Rattus_norvegicus
ENSSBOG00000022353	YTHDC1	100	98.495	ENSRBIG00000028279	YTHDC1	100	98.495	Rhinopithecus_bieti
ENSSBOG00000022353	YTHDC1	100	99.718	ENSRROG00000035028	YTHDC1	100	99.718	Rhinopithecus_roxellana
ENSSBOG00000022353	YTHDC1	96	87.308	ENSSHAG00000002538	YTHDC1	91	87.370	Sarcophilus_harrisii
ENSSBOG00000022353	YTHDC1	96	66.793	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSSBOG00000022353	YTHDC1	57	59.251	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSSBOG00000022353	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.225	Seriola_dumerili
ENSSBOG00000022353	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.225	Seriola_lalandi_dorsalis
ENSSBOG00000022353	YTHDC1	80	97.099	ENSSARG00000010960	YTHDC1	100	97.099	Sorex_araneus
ENSSBOG00000022353	YTHDC1	96	79.502	ENSSPUG00000009357	YTHDC1	91	83.013	Sphenodon_punctatus
ENSSBOG00000022353	YTHDC1	58	61.261	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSSBOG00000022353	YTHDC1	100	97.166	ENSSSCG00000035505	YTHDC1	100	97.166	Sus_scrofa
ENSSBOG00000022353	YTHDC1	96	84.069	ENSTGUG00000004452	-	92	85.359	Taeniopygia_guttata
ENSSBOG00000022353	YTHDC1	64	68.182	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSSBOG00000022353	YTHDC1	90	62.069	ENSTNIG00000013243	ythdc1	89	65.068	Tetraodon_nigroviridis
ENSSBOG00000022353	YTHDC1	96	85.271	ENSTBEG00000011546	YTHDC1	92	86.804	Tupaia_belangeri
ENSSBOG00000022353	YTHDC1	100	95.805	ENSTTRG00000005083	YTHDC1	100	95.805	Tursiops_truncatus
ENSSBOG00000022353	YTHDC1	93	97.731	ENSUAMG00000010388	YTHDC1	100	97.731	Ursus_americanus
ENSSBOG00000022353	YTHDC1	99	83.219	ENSUMAG00000013668	YTHDC1	98	83.219	Ursus_maritimus
ENSSBOG00000022353	YTHDC1	100	97.887	ENSVPAG00000009040	YTHDC1	100	97.887	Vicugna_pacos
ENSSBOG00000022353	YTHDC1	99	97.808	ENSVVUG00000005387	YTHDC1	100	96.512	Vulpes_vulpes
ENSSBOG00000022353	YTHDC1	97	70.019	ENSXETG00000017960	ythdc1	91	72.546	Xenopus_tropicalis
ENSSBOG00000022353	YTHDC1	71	50.000	ENSXCOG00000000530	ythdc1	87	51.361	Xiphophorus_couchianus
ENSSBOG00000022353	YTHDC1	56	60.000	ENSXMAG00000005196	ythdc1	61	64.904	Xiphophorus_maculatus