EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000022460 (Gene tree)
Gene ID: 101052164
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 5241 bases
Position: chrJH378167.1:366337-371577
Accession: 19440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011274	SBDS	PF01172.18	5.7e-30	1	1
ENSSBOP00000011274	SBDS_C	PF09377.10	2.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000028055	SBDS-201	1363	XM_003934098	ENSSBOP00000011274	232 (aa)	XP_003934147	A0A2K6SV57

Gene Model

Click here to download ENSSBOG00000022460's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022460	SBDS	100	99.138	ENSG00000126524	SBDS	93	99.138	Homo_sapiens
ENSSBOG00000022460	SBDS	99	81.385	ENSAPOG00000014285	sbds	93	81.385	Acanthochromis_polyacanthus
ENSSBOG00000022460	SBDS	100	97.845	ENSAMEG00000018167	SBDS	93	97.845	Ailuropoda_melanoleuca
ENSSBOG00000022460	SBDS	99	80.769	ENSACIG00000007308	sbds	93	80.769	Amphilophus_citrinellus
ENSSBOG00000022460	SBDS	99	81.385	ENSAOCG00000016770	sbds	93	81.385	Amphiprion_ocellaris
ENSSBOG00000022460	SBDS	99	81.818	ENSAPEG00000015897	sbds	93	81.818	Amphiprion_percula
ENSSBOG00000022460	SBDS	99	81.818	ENSATEG00000006901	sbds	93	81.818	Anabas_testudineus
ENSSBOG00000022460	SBDS	92	91.080	ENSANAG00000024342	-	89	91.080	Aotus_nancymaae
ENSSBOG00000022460	SBDS	89	98.551	ENSANAG00000037501	-	100	98.551	Aotus_nancymaae
ENSSBOG00000022460	SBDS	99	82.251	ENSACLG00000018750	sbds	93	82.251	Astatotilapia_calliptera
ENSSBOG00000022460	SBDS	100	82.328	ENSAMXG00000005361	sbds	93	82.328	Astyanax_mexicanus
ENSSBOG00000022460	SBDS	100	97.845	ENSBTAG00000004051	SBDS	93	97.845	Bos_taurus
ENSSBOG00000022460	SBDS	98	55.459	WBGene00021063	sbds-1	91	55.459	Caenorhabditis_elegans
ENSSBOG00000022460	SBDS	100	97.845	ENSCJAG00000041007	SBDS	93	97.845	Callithrix_jacchus
ENSSBOG00000022460	SBDS	100	95.726	ENSCAFG00000010797	SBDS	93	95.726	Canis_familiaris
ENSSBOG00000022460	SBDS	100	98.276	ENSCAFG00020005357	SBDS	93	98.276	Canis_lupus_dingo
ENSSBOG00000022460	SBDS	100	98.707	ENSCHIG00000026854	SBDS	93	98.707	Capra_hircus
ENSSBOG00000022460	SBDS	100	99.138	ENSTSYG00000033822	SBDS	93	99.138	Carlito_syrichta
ENSSBOG00000022460	SBDS	71	96.951	ENSCAPG00000006634	SBDS	100	96.951	Cavia_aperea
ENSSBOG00000022460	SBDS	100	97.414	ENSCPOG00000036143	SBDS	93	97.414	Cavia_porcellus
ENSSBOG00000022460	SBDS	100	98.707	ENSCCAG00000020671	SBDS	93	98.707	Cebus_capucinus
ENSSBOG00000022460	SBDS	100	99.138	ENSCATG00000039026	SBDS	93	99.138	Cercocebus_atys
ENSSBOG00000022460	SBDS	99	69.264	ENSCLAG00000002113	-	92	69.264	Chinchilla_lanigera
ENSSBOG00000022460	SBDS	100	96.983	ENSCLAG00000005721	-	93	96.983	Chinchilla_lanigera
ENSSBOG00000022460	SBDS	100	99.138	ENSCSAG00000018275	SBDS	93	99.138	Chlorocebus_sabaeus
ENSSBOG00000022460	SBDS	100	93.103	ENSCHOG00000003795	SBDS	93	93.103	Choloepus_hoffmanni
ENSSBOG00000022460	SBDS	100	87.931	ENSCPBG00000014893	SBDS	93	87.931	Chrysemys_picta_bellii
ENSSBOG00000022460	SBDS	99	64.655	ENSCSAVG00000011811	-	93	64.655	Ciona_savignyi
ENSSBOG00000022460	SBDS	100	98.707	ENSCANG00000032368	SBDS	93	98.707	Colobus_angolensis_palliatus
ENSSBOG00000022460	SBDS	71	94.512	ENSCGRG00001019886	Sbds	100	94.512	Cricetulus_griseus_chok1gshd
ENSSBOG00000022460	SBDS	89	95.169	ENSCGRG00000009211	Sbds	100	95.169	Cricetulus_griseus_crigri
ENSSBOG00000022460	SBDS	99	79.654	ENSCSEG00000005798	sbds	93	79.654	Cynoglossus_semilaevis
ENSSBOG00000022460	SBDS	99	79.654	ENSCVAG00000001053	sbds	93	79.654	Cyprinodon_variegatus
ENSSBOG00000022460	SBDS	100	81.897	ENSDARG00000027803	sbds	93	81.897	Danio_rerio
ENSSBOG00000022460	SBDS	100	97.845	ENSDNOG00000041174	SBDS	93	97.845	Dasypus_novemcinctus
ENSSBOG00000022460	SBDS	100	94.828	ENSDORG00000026218	Sbds	93	94.828	Dipodomys_ordii
ENSSBOG00000022460	SBDS	91	56.132	FBgn0035714	CG8549	92	56.652	Drosophila_melanogaster
ENSSBOG00000022460	SBDS	89	63.285	ENSEBUG00000015780	sbds	92	63.285	Eptatretus_burgeri
ENSSBOG00000022460	SBDS	100	98.707	ENSEASG00005008821	SBDS	93	98.707	Equus_asinus_asinus
ENSSBOG00000022460	SBDS	100	98.707	ENSECAG00000008202	SBDS	93	98.707	Equus_caballus
ENSSBOG00000022460	SBDS	82	73.684	ENSEEUG00000004768	SBDS	91	73.684	Erinaceus_europaeus
ENSSBOG00000022460	SBDS	100	79.741	ENSELUG00000008382	sbds	93	79.741	Esox_lucius
ENSSBOG00000022460	SBDS	100	98.276	ENSFCAG00000022142	SBDS	93	98.276	Felis_catus
ENSSBOG00000022460	SBDS	100	87.931	ENSFALG00000013808	SBDS	93	87.931	Ficedula_albicollis
ENSSBOG00000022460	SBDS	100	97.414	ENSFDAG00000018947	-	93	97.414	Fukomys_damarensis
ENSSBOG00000022460	SBDS	99	76.190	ENSFHEG00000000708	sbds	93	76.190	Fundulus_heteroclitus
ENSSBOG00000022460	SBDS	100	81.897	ENSGMOG00000018356	sbds	92	81.897	Gadus_morhua
ENSSBOG00000022460	SBDS	100	87.500	ENSGALG00000027989	SBDS	93	87.500	Gallus_gallus
ENSSBOG00000022460	SBDS	99	77.826	ENSGAFG00000014204	sbds	100	77.826	Gambusia_affinis
ENSSBOG00000022460	SBDS	99	80.087	ENSGACG00000012697	sbds	93	80.087	Gasterosteus_aculeatus
ENSSBOG00000022460	SBDS	92	88.785	ENSGAGG00000022402	SBDS	100	88.785	Gopherus_agassizii
ENSSBOG00000022460	SBDS	100	78.448	ENSGGOG00000040023	-	88	78.448	Gorilla_gorilla
ENSSBOG00000022460	SBDS	99	82.251	ENSHBUG00000002660	sbds	93	82.251	Haplochromis_burtoni
ENSSBOG00000022460	SBDS	100	95.690	ENSHGLG00000009671	SBDS	93	95.690	Heterocephalus_glaber_female
ENSSBOG00000022460	SBDS	100	95.690	ENSHGLG00100011332	SBDS	93	95.690	Heterocephalus_glaber_male
ENSSBOG00000022460	SBDS	99	79.654	ENSHCOG00000018606	sbds	93	79.654	Hippocampus_comes
ENSSBOG00000022460	SBDS	100	83.190	ENSIPUG00000006536	sbds	93	83.190	Ictalurus_punctatus
ENSSBOG00000022460	SBDS	99	93.939	ENSJJAG00000012033	-	92	93.939	Jaculus_jaculus
ENSSBOG00000022460	SBDS	100	67.234	ENSJJAG00000003934	-	91	67.234	Jaculus_jaculus
ENSSBOG00000022460	SBDS	99	82.251	ENSKMAG00000018542	sbds	93	82.251	Kryptolebias_marmoratus
ENSSBOG00000022460	SBDS	99	78.355	ENSLBEG00000016687	sbds	93	78.355	Labrus_bergylta
ENSSBOG00000022460	SBDS	100	68.220	ENSLACG00000018916	SBDS	93	68.220	Latimeria_chalumnae
ENSSBOG00000022460	SBDS	100	85.776	ENSLOCG00000004073	sbds	93	85.776	Lepisosteus_oculatus
ENSSBOG00000022460	SBDS	100	96.983	ENSLAFG00000008763	SBDS	93	96.983	Loxodonta_africana
ENSSBOG00000022460	SBDS	100	99.138	ENSMFAG00000032620	SBDS	93	99.138	Macaca_fascicularis
ENSSBOG00000022460	SBDS	100	99.138	ENSMMUG00000045653	SBDS	93	99.138	Macaca_mulatta
ENSSBOG00000022460	SBDS	100	99.138	ENSMNEG00000031523	SBDS	93	99.138	Macaca_nemestrina
ENSSBOG00000022460	SBDS	100	72.881	ENSMLEG00000036826	SBDS	91	72.881	Mandrillus_leucophaeus
ENSSBOG00000022460	SBDS	99	81.385	ENSMAMG00000016062	sbds	93	81.385	Mastacembelus_armatus
ENSSBOG00000022460	SBDS	99	82.251	ENSMZEG00005024385	sbds	93	82.251	Maylandia_zebra
ENSSBOG00000022460	SBDS	100	87.500	ENSMGAG00000002119	SBDS	93	87.500	Meleagris_gallopavo
ENSSBOG00000022460	SBDS	99	74.026	ENSMAUG00000022214	-	91	74.026	Mesocricetus_auratus
ENSSBOG00000022460	SBDS	100	98.276	ENSMICG00000014366	SBDS	93	98.276	Microcebus_murinus
ENSSBOG00000022460	SBDS	100	96.552	ENSMOCG00000011739	Sbds	93	96.552	Microtus_ochrogaster
ENSSBOG00000022460	SBDS	99	71.121	ENSMMOG00000005061	sbds	93	70.690	Mola_mola
ENSSBOG00000022460	SBDS	100	95.690	ENSMODG00000006644	SBDS	93	95.690	Monodelphis_domestica
ENSSBOG00000022460	SBDS	99	80.952	ENSMALG00000010219	sbds	93	80.952	Monopterus_albus
ENSSBOG00000022460	SBDS	100	96.552	MGP_CAROLIEiJ_G0027800	Sbds	97	95.808	Mus_caroli
ENSSBOG00000022460	SBDS	100	96.121	ENSMUSG00000025337	Sbds	96	96.386	Mus_musculus
ENSSBOG00000022460	SBDS	100	96.121	MGP_PahariEiJ_G0024384	Sbds	96	95.783	Mus_pahari
ENSSBOG00000022460	SBDS	100	96.121	MGP_SPRETEiJ_G0028798	Sbds	96	96.386	Mus_spretus
ENSSBOG00000022460	SBDS	72	92.857	ENSMPUG00000016192	SBDS	97	92.857	Mustela_putorius_furo
ENSSBOG00000022460	SBDS	78	96.154	ENSMLUG00000013575	SBDS	100	96.154	Myotis_lucifugus
ENSSBOG00000022460	SBDS	100	96.552	ENSNGAG00000012093	Sbds	93	96.552	Nannospalax_galili
ENSSBOG00000022460	SBDS	99	82.251	ENSNBRG00000017027	sbds	93	82.251	Neolamprologus_brichardi
ENSSBOG00000022460	SBDS	100	99.138	ENSNLEG00000013288	SBDS	93	99.138	Nomascus_leucogenys
ENSSBOG00000022460	SBDS	100	94.828	ENSOPRG00000008721	SBDS	93	94.828	Ochotona_princeps
ENSSBOG00000022460	SBDS	99	76.957	ENSODEG00000001116	-	91	76.957	Octodon_degus
ENSSBOG00000022460	SBDS	99	70.563	ENSODEG00000000137	-	77	74.459	Octodon_degus
ENSSBOG00000022460	SBDS	100	87.500	ENSODEG00000019253	-	78	87.500	Octodon_degus
ENSSBOG00000022460	SBDS	99	81.385	ENSONIG00000005874	sbds	93	81.385	Oreochromis_niloticus
ENSSBOG00000022460	SBDS	89	91.787	ENSOANG00000007674	-	100	91.787	Ornithorhynchus_anatinus
ENSSBOG00000022460	SBDS	100	96.552	ENSOCUG00000003170	SBDS	93	96.552	Oryctolagus_cuniculus
ENSSBOG00000022460	SBDS	99	78.355	ENSORLG00000023489	sbds	93	78.355	Oryzias_latipes
ENSSBOG00000022460	SBDS	99	77.922	ENSORLG00020019282	sbds	93	77.922	Oryzias_latipes_hni
ENSSBOG00000022460	SBDS	99	77.922	ENSORLG00015008005	sbds	93	77.922	Oryzias_latipes_hsok
ENSSBOG00000022460	SBDS	99	78.788	ENSOMEG00000022747	sbds	93	78.788	Oryzias_melastigma
ENSSBOG00000022460	SBDS	97	88.889	ENSOGAG00000015036	-	90	88.889	Otolemur_garnettii
ENSSBOG00000022460	SBDS	100	97.414	ENSOGAG00000009011	-	93	97.414	Otolemur_garnettii
ENSSBOG00000022460	SBDS	100	98.707	ENSOARG00000010609	SBDS	93	98.707	Ovis_aries
ENSSBOG00000022460	SBDS	100	98.276	ENSPPAG00000043889	-	93	98.276	Pan_paniscus
ENSSBOG00000022460	SBDS	100	98.276	ENSPPRG00000002307	SBDS	93	98.276	Panthera_pardus
ENSSBOG00000022460	SBDS	100	98.276	ENSPTIG00000021308	SBDS	93	98.276	Panthera_tigris_altaica
ENSSBOG00000022460	SBDS	86	95.980	ENSPTRG00000048174	-	88	95.980	Pan_troglodytes
ENSSBOG00000022460	SBDS	100	99.138	ENSPTRG00000019254	SBDS	93	99.138	Pan_troglodytes
ENSSBOG00000022460	SBDS	100	83.190	ENSPTRG00000050835	-	92	83.190	Pan_troglodytes
ENSSBOG00000022460	SBDS	100	82.759	ENSPTRG00000047744	-	92	82.759	Pan_troglodytes
ENSSBOG00000022460	SBDS	100	98.707	ENSPANG00000004078	SBDS	93	98.707	Papio_anubis
ENSSBOG00000022460	SBDS	100	82.328	ENSPKIG00000006489	sbds	93	82.328	Paramormyrops_kingsleyae
ENSSBOG00000022460	SBDS	89	89.372	ENSPSIG00000014603	SBDS	99	89.372	Pelodiscus_sinensis
ENSSBOG00000022460	SBDS	99	80.087	ENSPMGG00000004246	sbds	93	80.087	Periophthalmus_magnuspinnatus
ENSSBOG00000022460	SBDS	100	96.121	ENSPEMG00000008728	Sbds	93	96.121	Peromyscus_maniculatus_bairdii
ENSSBOG00000022460	SBDS	100	93.966	ENSPCIG00000029718	SBDS	93	93.966	Phascolarctos_cinereus
ENSSBOG00000022460	SBDS	99	78.788	ENSPFOG00000015837	sbds	93	78.788	Poecilia_formosa
ENSSBOG00000022460	SBDS	99	78.788	ENSPLAG00000003641	sbds	93	78.788	Poecilia_latipinna
ENSSBOG00000022460	SBDS	99	78.788	ENSPMEG00000019483	sbds	93	78.788	Poecilia_mexicana
ENSSBOG00000022460	SBDS	99	78.355	ENSPREG00000018758	sbds	93	78.355	Poecilia_reticulata
ENSSBOG00000022460	SBDS	100	99.138	ENSPPYG00000017513	SBDS	93	99.138	Pongo_abelii
ENSSBOG00000022460	SBDS	100	97.845	ENSPCOG00000021098	SBDS	93	97.845	Propithecus_coquereli
ENSSBOG00000022460	SBDS	100	98.276	ENSPVAG00000009369	SBDS	93	98.276	Pteropus_vampyrus
ENSSBOG00000022460	SBDS	99	81.818	ENSPNYG00000022403	sbds	93	81.818	Pundamilia_nyererei
ENSSBOG00000022460	SBDS	100	83.190	ENSPNAG00000001120	sbds	93	83.190	Pygocentrus_nattereri
ENSSBOG00000022460	SBDS	100	96.121	ENSRNOG00000000888	Sbds	93	96.121	Rattus_norvegicus
ENSSBOG00000022460	SBDS	100	99.138	ENSRBIG00000035557	SBDS	100	99.134	Rhinopithecus_bieti
ENSSBOG00000022460	SBDS	100	80.603	ENSRROG00000041986	-	92	78.879	Rhinopithecus_roxellana
ENSSBOG00000022460	SBDS	100	99.138	ENSRROG00000040842	-	100	99.134	Rhinopithecus_roxellana
ENSSBOG00000022460	SBDS	95	42.731	YLR022C	-	89	41.921	Saccharomyces_cerevisiae
ENSSBOG00000022460	SBDS	100	81.466	ENSSHAG00000010263	SBDS	93	81.466	Sarcophilus_harrisii
ENSSBOG00000022460	SBDS	100	83.621	ENSSFOG00015001108	sbds	93	83.621	Scleropages_formosus
ENSSBOG00000022460	SBDS	99	82.251	ENSSMAG00000020506	sbds	93	82.251	Scophthalmus_maximus
ENSSBOG00000022460	SBDS	99	80.952	ENSSDUG00000001528	sbds	93	80.952	Seriola_dumerili
ENSSBOG00000022460	SBDS	99	81.385	ENSSLDG00000003659	sbds	93	81.385	Seriola_lalandi_dorsalis
ENSSBOG00000022460	SBDS	71	97.059	ENSSARG00000001899	-	66	97.059	Sorex_araneus
ENSSBOG00000022460	SBDS	58	97.778	ENSSARG00000013132	-	88	97.778	Sorex_araneus
ENSSBOG00000022460	SBDS	100	85.345	ENSSPUG00000002699	SBDS	93	85.345	Sphenodon_punctatus
ENSSBOG00000022460	SBDS	99	81.385	ENSSPAG00000016419	sbds	92	73.276	Stegastes_partitus
ENSSBOG00000022460	SBDS	100	98.276	ENSSSCG00000007732	SBDS	93	98.276	Sus_scrofa
ENSSBOG00000022460	SBDS	71	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSSBOG00000022460	SBDS	99	81.385	ENSTRUG00000021443	sbds	93	81.385	Takifugu_rubripes
ENSSBOG00000022460	SBDS	99	80.087	ENSTNIG00000019000	sbds	93	80.087	Tetraodon_nigroviridis
ENSSBOG00000022460	SBDS	82	81.579	ENSTBEG00000001178	SBDS	91	81.579	Tupaia_belangeri
ENSSBOG00000022460	SBDS	100	76.724	ENSTTRG00000003921	SBDS	93	76.724	Tursiops_truncatus
ENSSBOG00000022460	SBDS	100	97.845	ENSUAMG00000001326	SBDS	93	97.845	Ursus_americanus
ENSSBOG00000022460	SBDS	100	97.845	ENSUMAG00000015353	SBDS	93	97.845	Ursus_maritimus
ENSSBOG00000022460	SBDS	100	98.276	ENSVVUG00000016478	SBDS	93	98.276	Vulpes_vulpes
ENSSBOG00000022460	SBDS	100	84.914	ENSXETG00000010093	sbds	93	84.914	Xenopus_tropicalis
ENSSBOG00000022460	SBDS	99	70.996	ENSXCOG00000010639	sbds	92	70.996	Xiphophorus_couchianus
ENSSBOG00000022460	SBDS	99	79.221	ENSXMAG00000006065	sbds	93	79.221	Xiphophorus_maculatus