EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000022486 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 954 bases
Position: chrJH378154.1:5371035-5371988
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011332	Brix	PF04427.18	5.1e-28	1	1
ENSSBOP00000011329	Brix	PF04427.18	4.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000028110	-	792	-	ENSSBOP00000011329	263 (aa)	-	A0A2K6SVB1
ENSSBOT00000028113	-	825	-	ENSSBOP00000011332	274 (aa)	-	A0A2K6SVC8

Gene Model

Click here to download ENSSBOG00000022486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000022486	-	89	68.605	ENSSBOG00000025434	-	92	65.504
ENSSBOG00000022486	-	74	68.900	ENSSBOG00000030264	-	73	68.528
ENSSBOG00000022486	-	73	68.627	ENSSBOG00000029182	-	92	55.263
ENSSBOG00000022486	-	92	68.872	ENSSBOG00000034420	-	98	63.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022486	-	93	85.294	ENSG00000197498	RPF2	97	85.507	Homo_sapiens
ENSSBOG00000022486	-	92	66.917	ENSAPOG00000005714	rpf2	97	58.242	Acanthochromis_polyacanthus
ENSSBOG00000022486	-	93	82.721	ENSAMEG00000015753	RPF2	89	82.721	Ailuropoda_melanoleuca
ENSSBOG00000022486	-	51	66.897	ENSACIG00000006659	rpf2	87	66.897	Amphilophus_citrinellus
ENSSBOG00000022486	-	92	66.541	ENSAOCG00000005173	rpf2	84	68.217	Amphiprion_ocellaris
ENSSBOG00000022486	-	92	66.541	ENSAPEG00000004003	rpf2	84	68.217	Amphiprion_percula
ENSSBOG00000022486	-	89	67.054	ENSATEG00000012818	rpf2	84	67.054	Anabas_testudineus
ENSSBOG00000022486	-	82	77.500	ENSAPLG00000008812	RPF2	100	65.934	Anas_platyrhynchos
ENSSBOG00000022486	-	92	72.388	ENSACAG00000011270	RPF2	87	72.388	Anolis_carolinensis
ENSSBOG00000022486	-	92	80.524	ENSANAG00000034834	-	87	80.524	Aotus_nancymaae
ENSSBOG00000022486	-	94	66.540	ENSANAG00000021067	-	87	66.160	Aotus_nancymaae
ENSSBOG00000022486	-	92	73.930	ENSANAG00000033736	-	98	64.828	Aotus_nancymaae
ENSSBOG00000022486	-	94	67.766	ENSANAG00000025459	-	98	64.336	Aotus_nancymaae
ENSSBOG00000022486	-	93	81.250	ENSANAG00000026549	-	99	73.898	Aotus_nancymaae
ENSSBOG00000022486	-	87	66.403	ENSAMXG00000035201	rpf2	82	66.403	Astyanax_mexicanus
ENSSBOG00000022486	-	93	83.088	ENSBTAG00000016584	RPF2	89	83.088	Bos_taurus
ENSSBOG00000022486	-	87	36.614	WBGene00021830	Y54E10A.10	86	36.614	Caenorhabditis_elegans
ENSSBOG00000022486	-	93	85.662	ENSCJAG00000038330	RPF2	99	85.000	Callithrix_jacchus
ENSSBOG00000022486	-	93	82.353	ENSCAFG00000003918	RPF2	89	82.353	Canis_familiaris
ENSSBOG00000022486	-	93	79.044	ENSCHIG00000022499	RPF2	99	73.220	Capra_hircus
ENSSBOG00000022486	-	93	80.515	ENSTSYG00000013924	RPF2	89	80.515	Carlito_syrichta
ENSSBOG00000022486	-	93	62.687	ENSCAPG00000014257	RPF2	99	56.491	Cavia_aperea
ENSSBOG00000022486	-	93	83.026	ENSCPOG00000006797	RPF2	100	73.541	Cavia_porcellus
ENSSBOG00000022486	-	92	84.701	ENSCCAG00000030365	-	88	84.701	Cebus_capucinus
ENSSBOG00000022486	-	94	69.202	ENSCCAG00000028553	-	88	67.803	Cebus_capucinus
ENSSBOG00000022486	-	93	86.029	ENSCCAG00000030864	-	89	86.029	Cebus_capucinus
ENSSBOG00000022486	-	95	69.455	ENSCCAG00000028906	-	87	71.981	Cebus_capucinus
ENSSBOG00000022486	-	80	70.042	ENSCATG00000029725	-	99	58.889	Cercocebus_atys
ENSSBOG00000022486	-	93	67.557	ENSCATG00000034352	-	99	56.610	Cercocebus_atys
ENSSBOG00000022486	-	92	61.364	ENSCLAG00000013252	-	98	61.364	Chinchilla_lanigera
ENSSBOG00000022486	-	93	69.343	ENSCLAG00000010874	-	92	67.883	Chinchilla_lanigera
ENSSBOG00000022486	-	93	83.026	ENSCLAG00000010393	-	100	74.708	Chinchilla_lanigera
ENSSBOG00000022486	-	89	79.457	ENSCHOG00000005865	RPF2	95	69.416	Choloepus_hoffmanni
ENSSBOG00000022486	-	91	75.940	ENSCPBG00000006504	RPF2	87	75.940	Chrysemys_picta_bellii
ENSSBOG00000022486	-	87	54.941	ENSCING00000008090	-	82	54.941	Ciona_intestinalis
ENSSBOG00000022486	-	88	54.651	ENSCSAVG00000010672	-	87	54.651	Ciona_savignyi
ENSSBOG00000022486	-	93	84.559	ENSCANG00000030665	RPF2	89	84.559	Colobus_angolensis_palliatus
ENSSBOG00000022486	-	93	80.147	ENSCGRG00001007331	-	89	80.147	Cricetulus_griseus_chok1gshd
ENSSBOG00000022486	-	96	70.943	ENSCGRG00001005262	-	88	70.943	Cricetulus_griseus_chok1gshd
ENSSBOG00000022486	-	93	80.147	ENSCGRG00000006083	Rpf2	100	72.374	Cricetulus_griseus_crigri
ENSSBOG00000022486	-	92	65.169	ENSCSEG00000015725	rpf2	89	65.169	Cynoglossus_semilaevis
ENSSBOG00000022486	-	92	65.038	ENSCVAG00000001072	rpf2	87	65.038	Cyprinodon_variegatus
ENSSBOG00000022486	-	89	65.251	ENSDARG00000043960	rpf2	82	66.403	Danio_rerio
ENSSBOG00000022486	-	73	80.882	ENSDNOG00000039270	RPF2	99	80.882	Dasypus_novemcinctus
ENSSBOG00000022486	-	76	49.524	ENSDORG00000026915	Rpf2	81	84.444	Dipodomys_ordii
ENSSBOG00000022486	-	88	43.145	FBgn0038585	Non3	78	43.750	Drosophila_melanogaster
ENSSBOG00000022486	-	88	49.412	ENSEBUG00000003640	rpf2	78	49.219	Eptatretus_burgeri
ENSSBOG00000022486	-	91	81.061	ENSEASG00005006927	-	99	71.854	Equus_asinus_asinus
ENSSBOG00000022486	-	53	76.974	ENSEASG00005002363	-	98	76.974	Equus_asinus_asinus
ENSSBOG00000022486	-	91	85.227	ENSECAG00000017121	RPF2	89	84.191	Equus_caballus
ENSSBOG00000022486	-	75	84.444	ENSEEUG00000006169	RPF2	73	84.444	Erinaceus_europaeus
ENSSBOG00000022486	-	87	68.379	ENSELUG00000018518	rpf2	83	68.379	Esox_lucius
ENSSBOG00000022486	-	93	83.088	ENSFCAG00000001527	RPF2	89	83.088	Felis_catus
ENSSBOG00000022486	-	90	77.186	ENSFALG00000010816	RPF2	99	65.461	Ficedula_albicollis
ENSSBOG00000022486	-	81	65.823	ENSFDAG00000016721	-	100	63.855	Fukomys_damarensis
ENSSBOG00000022486	-	93	82.353	ENSFDAG00000005811	-	100	74.708	Fukomys_damarensis
ENSSBOG00000022486	-	90	67.176	ENSFHEG00000011243	rpf2	85	67.176	Fundulus_heteroclitus
ENSSBOG00000022486	-	92	52.632	ENSGMOG00000002521	rpf2	89	52.632	Gadus_morhua
ENSSBOG00000022486	-	90	76.806	ENSGALG00000037087	RPF2	97	66.216	Gallus_gallus
ENSSBOG00000022486	-	92	65.038	ENSGAFG00000009537	rpf2	87	65.038	Gambusia_affinis
ENSSBOG00000022486	-	87	68.775	ENSGACG00000006507	rpf2	82	68.775	Gasterosteus_aculeatus
ENSSBOG00000022486	-	91	72.932	ENSGAGG00000016221	RPF2	97	66.552	Gopherus_agassizii
ENSSBOG00000022486	-	93	73.664	ENSGGOG00000001469	RPF2	99	62.373	Gorilla_gorilla
ENSSBOG00000022486	-	87	79.842	ENSGGOG00000024187	-	88	79.842	Gorilla_gorilla
ENSSBOG00000022486	-	91	67.803	ENSHBUG00000021805	rpf2	86	67.803	Haplochromis_burtoni
ENSSBOG00000022486	-	99	73.145	ENSHGLG00000012500	-	76	75.088	Heterocephalus_glaber_female
ENSSBOG00000022486	-	93	82.353	ENSHGLG00000001322	RPF2	100	72.763	Heterocephalus_glaber_female
ENSSBOG00000022486	-	89	78.077	ENSHGLG00000012697	-	90	78.077	Heterocephalus_glaber_female
ENSSBOG00000022486	-	93	68.401	ENSHGLG00100009310	-	99	69.517	Heterocephalus_glaber_male
ENSSBOG00000022486	-	93	82.353	ENSHGLG00100012131	RPF2	100	72.763	Heterocephalus_glaber_male
ENSSBOG00000022486	-	95	73.626	ENSHGLG00100012473	-	89	75.636	Heterocephalus_glaber_male
ENSSBOG00000022486	-	87	70.400	ENSHGLG00100002981	-	100	67.692	Heterocephalus_glaber_male
ENSSBOG00000022486	-	89	78.077	ENSHGLG00100000462	-	90	78.077	Heterocephalus_glaber_male
ENSSBOG00000022486	-	92	66.541	ENSHCOG00000000225	rpf2	87	66.541	Hippocampus_comes
ENSSBOG00000022486	-	88	61.290	ENSIPUG00000016288	rpf2	83	59.843	Ictalurus_punctatus
ENSSBOG00000022486	-	93	64.552	ENSSTOG00000013114	RPF2	100	56.746	Ictidomys_tridecemlineatus
ENSSBOG00000022486	-	92	75.373	ENSJJAG00000009092	Rpf2	100	74.319	Jaculus_jaculus
ENSSBOG00000022486	-	91	67.300	ENSKMAG00000014609	rpf2	96	58.519	Kryptolebias_marmoratus
ENSSBOG00000022486	-	87	68.775	ENSLBEG00000011907	rpf2	92	58.846	Labrus_bergylta
ENSSBOG00000022486	-	91	68.797	ENSLACG00000003942	RPF2	84	68.797	Latimeria_chalumnae
ENSSBOG00000022486	-	87	69.531	ENSLOCG00000016992	rpf2	83	69.531	Lepisosteus_oculatus
ENSSBOG00000022486	-	92	82.847	ENSLAFG00000018219	RPF2	89	82.847	Loxodonta_africana
ENSSBOG00000022486	-	80	67.647	ENSMFAG00000036119	-	99	57.565	Macaca_fascicularis
ENSSBOG00000022486	-	93	85.294	ENSMFAG00000000417	RPF2	99	83.537	Macaca_fascicularis
ENSSBOG00000022486	-	93	85.294	ENSMMUG00000021532	RPF2	97	85.507	Macaca_mulatta
ENSSBOG00000022486	-	92	66.544	ENSMMUG00000042376	-	99	57.377	Macaca_mulatta
ENSSBOG00000022486	-	93	73.664	ENSMNEG00000031683	RPF2	99	62.034	Macaca_nemestrina
ENSSBOG00000022486	-	92	68.539	ENSMLEG00000042472	-	99	58.667	Mandrillus_leucophaeus
ENSSBOG00000022486	-	89	64.865	ENSMAMG00000004267	rpf2	84	64.865	Mastacembelus_armatus
ENSSBOG00000022486	-	91	67.803	ENSMZEG00005015632	rpf2	86	67.803	Maylandia_zebra
ENSSBOG00000022486	-	90	76.806	ENSMGAG00000013429	RPF2	86	76.806	Meleagris_gallopavo
ENSSBOG00000022486	-	91	74.905	ENSMICG00000038169	-	99	63.487	Microcebus_murinus
ENSSBOG00000022486	-	92	67.416	ENSMICG00000028979	-	99	58.000	Microcebus_murinus
ENSSBOG00000022486	-	93	83.088	ENSMICG00000032086	-	99	81.098	Microcebus_murinus
ENSSBOG00000022486	-	93	81.618	ENSMOCG00000005634	Rpf2	100	73.541	Microtus_ochrogaster
ENSSBOG00000022486	-	89	63.137	ENSMMOG00000014844	rpf2	85	63.386	Mola_mola
ENSSBOG00000022486	-	93	78.309	ENSMODG00000017919	RPF2	89	78.309	Monodelphis_domestica
ENSSBOG00000022486	-	89	66.795	ENSMALG00000019046	rpf2	84	66.795	Monopterus_albus
ENSSBOG00000022486	-	93	80.147	MGP_CAROLIEiJ_G0015254	Rpf2	100	72.763	Mus_caroli
ENSSBOG00000022486	-	92	79.926	ENSMUSG00000038510	Rpf2	99	79.926	Mus_musculus
ENSSBOG00000022486	-	93	79.779	MGP_PahariEiJ_G0030671	Rpf2	99	79.779	Mus_pahari
ENSSBOG00000022486	-	92	79.926	MGP_SPRETEiJ_G0016063	Rpf2	98	79.926	Mus_spretus
ENSSBOG00000022486	-	93	83.456	ENSMPUG00000010183	RPF2	77	83.456	Mustela_putorius_furo
ENSSBOG00000022486	-	87	84.146	ENSMLUG00000005676	RPF2	99	83.794	Myotis_lucifugus
ENSSBOG00000022486	-	93	81.550	ENSNGAG00000009701	Rpf2	100	73.541	Nannospalax_galili
ENSSBOG00000022486	-	91	67.424	ENSNBRG00000011087	rpf2	86	67.424	Neolamprologus_brichardi
ENSSBOG00000022486	-	93	84.559	ENSNLEG00000027819	RPF2	89	84.559	Nomascus_leucogenys
ENSSBOG00000022486	-	73	83.645	ENSNLEG00000011848	-	85	83.092	Nomascus_leucogenys
ENSSBOG00000022486	-	100	73.010	ENSNLEG00000033597	-	90	73.010	Nomascus_leucogenys
ENSSBOG00000022486	-	92	60.294	ENSMEUG00000006421	RPF2	92	60.294	Notamacropus_eugenii
ENSSBOG00000022486	-	93	83.026	ENSODEG00000013529	-	100	74.708	Octodon_degus
ENSSBOG00000022486	-	89	76.538	ENSODEG00000006584	-	99	70.280	Octodon_degus
ENSSBOG00000022486	-	87	76.639	ENSODEG00000002442	-	87	76.639	Octodon_degus
ENSSBOG00000022486	-	80	74.336	ENSODEG00000003531	-	87	73.799	Octodon_degus
ENSSBOG00000022486	-	83	71.901	ENSODEG00000006939	-	85	76.037	Octodon_degus
ENSSBOG00000022486	-	93	80.074	ENSODEG00000019144	-	89	80.074	Octodon_degus
ENSSBOG00000022486	-	91	67.424	ENSONIG00000011383	rpf2	86	67.424	Oreochromis_niloticus
ENSSBOG00000022486	-	93	82.721	ENSOCUG00000016028	RPF2	89	82.721	Oryctolagus_cuniculus
ENSSBOG00000022486	-	92	65.074	ENSORLG00000015183	rpf2	88	65.074	Oryzias_latipes
ENSSBOG00000022486	-	92	65.074	ENSORLG00020008756	rpf2	88	62.868	Oryzias_latipes_hni
ENSSBOG00000022486	-	92	65.074	ENSORLG00015003841	RPF2	88	65.074	Oryzias_latipes_hsok
ENSSBOG00000022486	-	91	66.667	ENSOMEG00000011508	rpf2	86	66.667	Oryzias_melastigma
ENSSBOG00000022486	-	93	83.088	ENSOGAG00000007438	RPF2	89	83.088	Otolemur_garnettii
ENSSBOG00000022486	-	93	83.088	ENSOARG00000009886	-	89	83.088	Ovis_aries
ENSSBOG00000022486	-	93	83.088	ENSOARG00000015548	-	89	83.088	Ovis_aries
ENSSBOG00000022486	-	83	81.818	ENSPPAG00000032089	-	86	81.818	Pan_paniscus
ENSSBOG00000022486	-	93	85.294	ENSPPAG00000035622	RPF2	89	85.294	Pan_paniscus
ENSSBOG00000022486	-	92	73.585	ENSPPRG00000008363	-	88	73.585	Panthera_pardus
ENSSBOG00000022486	-	93	83.456	ENSPPRG00000000320	-	89	83.456	Panthera_pardus
ENSSBOG00000022486	-	93	83.456	ENSPTIG00000002060	RPF2	89	83.456	Panthera_tigris_altaica
ENSSBOG00000022486	-	93	85.294	ENSPTRG00000018503	RPF2	89	85.294	Pan_troglodytes
ENSSBOG00000022486	-	93	85.294	ENSPANG00000018834	RPF2	89	85.294	Papio_anubis
ENSSBOG00000022486	-	87	68.379	ENSPKIG00000019506	rpf2	93	59.770	Paramormyrops_kingsleyae
ENSSBOG00000022486	-	91	75.940	ENSPSIG00000014887	RPF2	87	75.940	Pelodiscus_sinensis
ENSSBOG00000022486	-	86	75.304	ENSPEMG00000011413	Rpf2	100	71.984	Peromyscus_maniculatus_bairdii
ENSSBOG00000022486	-	91	79.167	ENSPCIG00000028172	RPF2	87	77.574	Phascolarctos_cinereus
ENSSBOG00000022486	-	89	67.442	ENSPFOG00000003396	rpf2	85	67.442	Poecilia_formosa
ENSSBOG00000022486	-	89	66.667	ENSPLAG00000001226	rpf2	85	66.667	Poecilia_latipinna
ENSSBOG00000022486	-	89	67.442	ENSPMEG00000007781	rpf2	85	67.442	Poecilia_mexicana
ENSSBOG00000022486	-	89	66.279	ENSPREG00000020525	rpf2	85	66.279	Poecilia_reticulata
ENSSBOG00000022486	-	93	85.662	ENSPPYG00000016925	RPF2	89	85.662	Pongo_abelii
ENSSBOG00000022486	-	66	79.787	ENSPCAG00000002562	RPF2	76	79.255	Procavia_capensis
ENSSBOG00000022486	-	93	72.031	ENSPCOG00000012785	RPF2	88	72.031	Propithecus_coquereli
ENSSBOG00000022486	-	84	85.294	ENSPVAG00000003446	RPF2	83	83.794	Pteropus_vampyrus
ENSSBOG00000022486	-	91	65.152	ENSPNAG00000000082	rpf2	86	65.152	Pygocentrus_nattereri
ENSSBOG00000022486	-	93	79.779	ENSRNOG00000000587	Rpf2	89	79.779	Rattus_norvegicus
ENSSBOG00000022486	-	89	84.615	ENSRBIG00000038389	RPF2	99	82.317	Rhinopithecus_bieti
ENSSBOG00000022486	-	80	77.637	ENSRROG00000039510	-	87	77.637	Rhinopithecus_roxellana
ENSSBOG00000022486	-	92	84.926	ENSRROG00000036457	RPF2	89	84.926	Rhinopithecus_roxellana
ENSSBOG00000022486	-	86	73.663	ENSRROG00000028992	-	84	73.307	Rhinopithecus_roxellana
ENSSBOG00000022486	-	73	80.556	ENSRROG00000036685	-	79	80.676	Rhinopithecus_roxellana
ENSSBOG00000022486	-	91	37.455	YKR081C	-	80	37.455	Saccharomyces_cerevisiae
ENSSBOG00000022486	-	93	77.574	ENSSHAG00000002212	RPF2	88	77.574	Sarcophilus_harrisii
ENSSBOG00000022486	-	92	63.534	ENSSFOG00015020916	rpf2	85	63.534	Scleropages_formosus
ENSSBOG00000022486	-	87	67.984	ENSSMAG00000017499	rpf2	82	67.984	Scophthalmus_maximus
ENSSBOG00000022486	-	89	64.341	ENSSDUG00000010383	rpf2	82	64.341	Seriola_dumerili
ENSSBOG00000022486	-	89	68.217	ENSSLDG00000022111	rpf2	94	58.889	Seriola_lalandi_dorsalis
ENSSBOG00000022486	-	93	57.407	ENSSARG00000012063	RPF2	88	57.407	Sorex_araneus
ENSSBOG00000022486	-	92	71.910	ENSSPUG00000005108	RPF2	88	70.956	Sphenodon_punctatus
ENSSBOG00000022486	-	92	66.541	ENSSPAG00000008035	rpf2	82	69.565	Stegastes_partitus
ENSSBOG00000022486	-	93	83.456	ENSSSCG00000004394	RPF2	99	73.835	Sus_scrofa
ENSSBOG00000022486	-	90	76.806	ENSTGUG00000012034	RPF2	97	66.554	Taeniopygia_guttata
ENSSBOG00000022486	-	88	67.315	ENSTRUG00000018264	rpf2	83	67.315	Takifugu_rubripes
ENSSBOG00000022486	-	91	67.843	ENSTNIG00000002749	rpf2	84	67.857	Tetraodon_nigroviridis
ENSSBOG00000022486	-	81	82.222	ENSTBEG00000017151	RPF2	83	76.285	Tupaia_belangeri
ENSSBOG00000022486	-	93	82.353	ENSTTRG00000012357	RPF2	89	82.353	Tursiops_truncatus
ENSSBOG00000022486	-	93	83.824	ENSUAMG00000013497	RPF2	89	83.824	Ursus_americanus
ENSSBOG00000022486	-	93	83.456	ENSUMAG00000025488	RPF2	89	83.456	Ursus_maritimus
ENSSBOG00000022486	-	92	83.456	ENSVPAG00000009562	RPF2	89	83.456	Vicugna_pacos
ENSSBOG00000022486	-	93	74.632	ENSVVUG00000006593	-	99	71.831	Vulpes_vulpes
ENSSBOG00000022486	-	93	71.747	ENSVVUG00000021231	-	89	82.222	Vulpes_vulpes
ENSSBOG00000022486	-	92	69.818	ENSXETG00000021335	rpf2	100	59.740	Xenopus_tropicalis
ENSSBOG00000022486	-	89	64.093	ENSXCOG00000001590	rpf2	84	64.341	Xiphophorus_couchianus
ENSSBOG00000022486	-	92	58.868	ENSXMAG00000021706	rpf2	96	57.455	Xiphophorus_maculatus