EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000022627 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 4477 bases
Position: chrJH378184.1:5895171-5899647
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011625	RRM_1	PF00076.22	2.6e-18	1	2
ENSSBOP00000011625	RRM_1	PF00076.22	2.6e-18	2	2
ENSSBOP00000011620	RRM_1	PF00076.22	3.1e-18	1	2
ENSSBOP00000011620	RRM_1	PF00076.22	3.1e-18	2	2
ENSSBOP00000011621	RRM_1	PF00076.22	3.4e-18	1	2
ENSSBOP00000011621	RRM_1	PF00076.22	3.4e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000028406	-	792	-	ENSSBOP00000011620	263 (aa)	-	A0A2K6SW64
ENSSBOT00000028407	-	816	-	ENSSBOP00000011621	271 (aa)	-	A0A2K6SW66
ENSSBOT00000028411	-	750	-	ENSSBOP00000011625	249 (aa)	-	A0A2K6SW72

Gene Model

Click here to download ENSSBOG00000022627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000022627	-	100	74.751	ENSSBOG00000020566	-	100	74.751
ENSSBOG00000022627	-	51	64.583	ENSSBOG00000022526	HNRNPAB	98	39.487
ENSSBOG00000022627	-	53	37.313	ENSSBOG00000005245	HNRNPA2B1	90	36.054
ENSSBOG00000022627	-	86	66.807	ENSSBOG00000028904	-	99	66.250
ENSSBOG00000022627	-	84	37.555	ENSSBOG00000026425	MSI2	59	44.667
ENSSBOG00000022627	-	52	34.667	ENSSBOG00000035723	-	50	34.667
ENSSBOG00000022627	-	51	35.135	ENSSBOG00000034299	-	61	36.000
ENSSBOG00000022627	-	53	30.075	ENSSBOG00000022837	-	50	30.952
ENSSBOG00000022627	-	52	34.694	ENSSBOG00000020034	-	50	35.821
ENSSBOG00000022627	-	99	50.523	ENSSBOG00000032881	HNRNPD	82	53.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022627	-	100	81.728	ENSG00000152795	HNRNPDL	100	81.728	Homo_sapiens
ENSSBOG00000022627	-	98	81.757	ENSAMEG00000005145	-	79	81.757	Ailuropoda_melanoleuca
ENSSBOG00000022627	-	100	64.452	ENSAMEG00000007660	-	100	61.279	Ailuropoda_melanoleuca
ENSSBOG00000022627	-	93	76.336	ENSAPLG00000011774	HNRNPDL	99	76.515	Anas_platyrhynchos
ENSSBOG00000022627	-	96	76.471	ENSACAG00000010416	HNRNPDL	91	76.471	Anolis_carolinensis
ENSSBOG00000022627	-	100	69.435	ENSANAG00000035355	-	100	69.435	Aotus_nancymaae
ENSSBOG00000022627	-	100	75.083	ENSANAG00000030316	-	86	73.094	Aotus_nancymaae
ENSSBOG00000022627	-	86	70.925	ENSANAG00000035255	-	98	70.306	Aotus_nancymaae
ENSSBOG00000022627	-	100	82.069	ENSANAG00000038001	-	100	82.069	Aotus_nancymaae
ENSSBOG00000022627	-	100	81.728	ENSANAG00000029054	HNRNPDL	72	81.728	Aotus_nancymaae
ENSSBOG00000022627	-	100	57.627	ENSAMXG00000001495	hnrnpdl	97	61.433	Astyanax_mexicanus
ENSSBOG00000022627	-	100	81.728	ENSBTAG00000014804	HNRNPDL	72	81.728	Bos_taurus
ENSSBOG00000022627	-	66	73.810	ENSCJAG00000045227	-	73	72.906	Callithrix_jacchus
ENSSBOG00000022627	-	100	81.728	ENSCJAG00000015197	-	72	81.728	Callithrix_jacchus
ENSSBOG00000022627	-	96	67.491	ENSCAFG00000000776	-	100	68.056	Canis_familiaris
ENSSBOG00000022627	-	100	81.728	ENSCAFG00000008940	HNRNPDL	72	81.728	Canis_familiaris
ENSSBOG00000022627	-	100	81.728	ENSCAFG00020010699	-	72	81.728	Canis_lupus_dingo
ENSSBOG00000022627	-	100	81.728	ENSCHIG00000010260	-	72	81.728	Capra_hircus
ENSSBOG00000022627	-	71	84.615	ENSCHIG00000026667	-	64	84.615	Capra_hircus
ENSSBOG00000022627	-	54	65.244	ENSTSYG00000026714	-	88	65.663	Carlito_syrichta
ENSSBOG00000022627	-	95	67.014	ENSTSYG00000036907	-	100	67.014	Carlito_syrichta
ENSSBOG00000022627	-	96	80.669	ENSTSYG00000031074	-	100	80.882	Carlito_syrichta
ENSSBOG00000022627	-	95	81.124	ENSCAPG00000015955	-	100	81.275	Cavia_aperea
ENSSBOG00000022627	-	96	81.784	ENSCPOG00000015619	-	72	81.507	Cavia_porcellus
ENSSBOG00000022627	-	51	84.252	ENSCCAG00000020531	-	80	68.605	Cebus_capucinus
ENSSBOG00000022627	-	100	81.728	ENSCCAG00000020777	HNRNPDL	72	81.728	Cebus_capucinus
ENSSBOG00000022627	-	62	74.874	ENSCATG00000030349	-	88	74.874	Cercocebus_atys
ENSSBOG00000022627	-	96	81.041	ENSCATG00000038573	-	61	91.304	Cercocebus_atys
ENSSBOG00000022627	-	100	59.136	ENSCLAG00000010786	-	100	59.801	Chinchilla_lanigera
ENSSBOG00000022627	-	100	81.728	ENSCLAG00000008428	HNRNPDL	71	81.728	Chinchilla_lanigera
ENSSBOG00000022627	-	100	81.728	ENSCSAG00000004461	HNRNPDL	72	81.728	Chlorocebus_sabaeus
ENSSBOG00000022627	-	97	80.479	ENSCHOG00000000160	-	100	80.479	Choloepus_hoffmanni
ENSSBOG00000022627	-	100	79.402	ENSCHOG00000010831	-	90	79.402	Choloepus_hoffmanni
ENSSBOG00000022627	-	95	79.151	ENSCHOG00000009204	-	100	78.707	Choloepus_hoffmanni
ENSSBOG00000022627	-	96	78.810	ENSCHOG00000002938	-	100	79.044	Choloepus_hoffmanni
ENSSBOG00000022627	-	100	77.409	ENSCHOG00000003275	-	89	72.093	Choloepus_hoffmanni
ENSSBOG00000022627	-	100	76.898	ENSCPBG00000008014	HNRNPDL	100	76.898	Chrysemys_picta_bellii
ENSSBOG00000022627	-	96	81.784	ENSCANG00000020228	-	100	81.985	Colobus_angolensis_palliatus
ENSSBOG00000022627	-	100	81.395	ENSCGRG00001010960	Hnrnpdl	94	76.768	Cricetulus_griseus_chok1gshd
ENSSBOG00000022627	-	96	81.413	ENSCGRG00000011361	-	99	79.021	Cricetulus_griseus_crigri
ENSSBOG00000022627	-	100	59.727	ENSDARG00000003429	hnrnpdl	97	61.745	Danio_rerio
ENSSBOG00000022627	-	56	64.935	ENSDNOG00000046422	-	84	65.035	Dasypus_novemcinctus
ENSSBOG00000022627	-	96	54.580	ENSDNOG00000034016	-	96	54.406	Dasypus_novemcinctus
ENSSBOG00000022627	-	100	81.063	ENSDNOG00000003887	-	72	81.063	Dasypus_novemcinctus
ENSSBOG00000022627	-	58	89.172	ENSDNOG00000033765	-	93	91.304	Dasypus_novemcinctus
ENSSBOG00000022627	-	96	77.241	ENSDNOG00000033760	-	93	77.241	Dasypus_novemcinctus
ENSSBOG00000022627	-	100	79.070	ENSDNOG00000018280	-	97	79.070	Dasypus_novemcinctus
ENSSBOG00000022627	-	100	81.728	ENSDORG00000000968	-	71	81.728	Dipodomys_ordii
ENSSBOG00000022627	-	100	72.757	ENSDORG00000024157	-	100	72.757	Dipodomys_ordii
ENSSBOG00000022627	-	80	54.260	ENSETEG00000010820	-	100	54.148	Echinops_telfairi
ENSSBOG00000022627	-	100	81.728	ENSEASG00005016276	-	72	81.728	Equus_asinus_asinus
ENSSBOG00000022627	-	99	41.290	ENSEASG00005012961	-	60	54.545	Equus_asinus_asinus
ENSSBOG00000022627	-	99	41.414	ENSECAG00000040564	-	51	55.195	Equus_caballus
ENSSBOG00000022627	-	100	81.728	ENSECAG00000022692	HNRNPDL	75	81.728	Equus_caballus
ENSSBOG00000022627	-	100	80.795	ENSEEUG00000004301	-	72	80.795	Erinaceus_europaeus
ENSSBOG00000022627	-	100	62.116	ENSELUG00000003241	hnrnpdl	97	63.481	Esox_lucius
ENSSBOG00000022627	-	100	81.728	ENSFCAG00000000455	HNRNPDL	72	81.728	Felis_catus
ENSSBOG00000022627	-	100	75.828	ENSFALG00000005709	HNRNPDL	100	75.828	Ficedula_albicollis
ENSSBOG00000022627	-	96	81.784	ENSFDAG00000000851	-	99	82.051	Fukomys_damarensis
ENSSBOG00000022627	-	100	76.159	ENSGALG00000023199	HNRNPDL	100	76.159	Gallus_gallus
ENSSBOG00000022627	-	100	76.898	ENSGAGG00000003646	HNRNPDL	100	76.898	Gopherus_agassizii
ENSSBOG00000022627	-	100	81.728	ENSGGOG00000003714	HNRNPDL	72	81.728	Gorilla_gorilla
ENSSBOG00000022627	-	100	60.797	ENSHGLG00000014427	-	91	72.906	Heterocephalus_glaber_female
ENSSBOG00000022627	-	92	76.744	ENSHGLG00000013420	-	93	75.540	Heterocephalus_glaber_female
ENSSBOG00000022627	-	100	81.395	ENSHGLG00000015791	HNRNPDL	71	81.395	Heterocephalus_glaber_female
ENSSBOG00000022627	-	96	62.544	ENSHGLG00100010072	-	93	60.490	Heterocephalus_glaber_male
ENSSBOG00000022627	-	100	81.395	ENSHGLG00100005262	HNRNPDL	89	81.395	Heterocephalus_glaber_male
ENSSBOG00000022627	-	100	66.445	ENSHGLG00100016282	-	100	62.791	Heterocephalus_glaber_male
ENSSBOG00000022627	-	100	69.360	ENSHGLG00100019080	-	92	66.330	Heterocephalus_glaber_male
ENSSBOG00000022627	-	100	66.887	ENSHGLG00100017644	-	100	65.563	Heterocephalus_glaber_male
ENSSBOG00000022627	-	100	59.386	ENSIPUG00000024951	hnrnpdl	97	61.092	Ictalurus_punctatus
ENSSBOG00000022627	-	100	81.728	ENSSTOG00000013979	HNRNPDL	72	81.728	Ictidomys_tridecemlineatus
ENSSBOG00000022627	-	67	92.000	ENSJJAG00000000674	-	75	92.000	Jaculus_jaculus
ENSSBOG00000022627	-	100	81.728	ENSJJAG00000021673	Hnrnpdl	71	81.728	Jaculus_jaculus
ENSSBOG00000022627	-	57	80.488	ENSLACG00000003613	HNRNPDL	88	91.304	Latimeria_chalumnae
ENSSBOG00000022627	-	100	62.116	ENSLOCG00000010736	hnrnpdl	97	63.140	Lepisosteus_oculatus
ENSSBOG00000022627	-	100	81.395	ENSLAFG00000008612	HNRNPDL	91	81.618	Loxodonta_africana
ENSSBOG00000022627	-	87	43.071	ENSLAFG00000031444	-	53	60.284	Loxodonta_africana
ENSSBOG00000022627	-	100	81.728	ENSMFAG00000002275	HNRNPDL	72	81.728	Macaca_fascicularis
ENSSBOG00000022627	-	96	78.972	ENSMMUG00000015777	HNRNPDL	100	79.167	Macaca_mulatta
ENSSBOG00000022627	-	100	81.728	ENSMNEG00000045130	HNRNPDL	72	81.728	Macaca_nemestrina
ENSSBOG00000022627	-	100	82.253	ENSMLEG00000014825	-	100	82.253	Mandrillus_leucophaeus
ENSSBOG00000022627	-	100	81.728	ENSMLEG00000041600	HNRNPDL	100	81.728	Mandrillus_leucophaeus
ENSSBOG00000022627	-	96	74.721	ENSMGAG00000008033	HNRNPDL	100	75.000	Meleagris_gallopavo
ENSSBOG00000022627	-	100	80.731	ENSMAUG00000011132	Hnrnpdl	94	76.431	Mesocricetus_auratus
ENSSBOG00000022627	-	66	74.038	ENSMICG00000037040	-	92	73.399	Microcebus_murinus
ENSSBOG00000022627	-	100	81.395	ENSMICG00000001445	-	71	81.395	Microcebus_murinus
ENSSBOG00000022627	-	100	80.731	ENSMOCG00000015928	Hnrnpdl	71	80.731	Microtus_ochrogaster
ENSSBOG00000022627	-	100	81.395	ENSMODG00000011916	-	72	81.395	Monodelphis_domestica
ENSSBOG00000022627	-	67	92.000	ENSMODG00000006825	-	94	92.000	Monodelphis_domestica
ENSSBOG00000022627	-	100	81.395	ENSMUSG00000029328	Hnrnpdl	93	81.395	Mus_musculus
ENSSBOG00000022627	-	100	81.063	MGP_PahariEiJ_G0017226	Hnrnpdl	93	81.063	Mus_pahari
ENSSBOG00000022627	-	100	81.395	MGP_SPRETEiJ_G0028445	Hnrnpdl	93	81.395	Mus_spretus
ENSSBOG00000022627	-	96	65.343	ENSMPUG00000006259	-	100	65.836	Mustela_putorius_furo
ENSSBOG00000022627	-	93	59.449	ENSMPUG00000011188	-	99	53.933	Mustela_putorius_furo
ENSSBOG00000022627	-	96	81.226	ENSMPUG00000014753	-	99	81.369	Mustela_putorius_furo
ENSSBOG00000022627	-	100	80.201	ENSMPUG00000009986	-	92	77.181	Mustela_putorius_furo
ENSSBOG00000022627	-	100	81.728	ENSMLUG00000014452	-	72	81.728	Myotis_lucifugus
ENSSBOG00000022627	-	95	61.654	ENSMLUG00000025989	-	91	56.537	Myotis_lucifugus
ENSSBOG00000022627	-	92	38.732	ENSMLUG00000030192	-	50	53.103	Myotis_lucifugus
ENSSBOG00000022627	-	100	80.399	ENSNGAG00000015740	Hnrnpdl	72	80.399	Nannospalax_galili
ENSSBOG00000022627	-	100	81.728	ENSNLEG00000008636	HNRNPDL	89	75.000	Nomascus_leucogenys
ENSSBOG00000022627	-	100	69.000	ENSMEUG00000010033	HNRNPDL	90	69.000	Notamacropus_eugenii
ENSSBOG00000022627	-	66	75.000	ENSMEUG00000011454	-	84	74.384	Notamacropus_eugenii
ENSSBOG00000022627	-	96	80.669	ENSOPRG00000007178	-	100	80.882	Ochotona_princeps
ENSSBOG00000022627	-	92	80.714	ENSODEG00000002106	-	63	79.200	Octodon_degus
ENSSBOG00000022627	-	100	76.412	ENSODEG00000004187	-	100	76.412	Octodon_degus
ENSSBOG00000022627	-	99	77.852	ENSODEG00000003135	-	100	77.852	Octodon_degus
ENSSBOG00000022627	-	100	80.066	ENSODEG00000020231	-	85	80.066	Octodon_degus
ENSSBOG00000022627	-	93	78.445	ENSODEG00000000376	-	81	78.445	Octodon_degus
ENSSBOG00000022627	-	96	81.784	ENSOANG00000004651	HNRNPDL	100	81.919	Ornithorhynchus_anatinus
ENSSBOG00000022627	-	69	43.458	ENSOCUG00000025252	-	72	52.564	Oryctolagus_cuniculus
ENSSBOG00000022627	-	100	79.734	ENSOCUG00000013805	-	73	79.734	Oryctolagus_cuniculus
ENSSBOG00000022627	-	91	42.599	ENSOGAG00000024995	-	53	57.143	Otolemur_garnettii
ENSSBOG00000022627	-	62	68.020	ENSOGAG00000031703	-	82	68.984	Otolemur_garnettii
ENSSBOG00000022627	-	100	78.405	ENSOGAG00000002501	-	72	79.402	Otolemur_garnettii
ENSSBOG00000022627	-	96	81.784	ENSOARG00000000824	-	92	76.689	Ovis_aries
ENSSBOG00000022627	-	51	91.089	ENSOARG00000002402	-	68	62.562	Ovis_aries
ENSSBOG00000022627	-	51	89.764	ENSOARG00000011472	-	63	71.111	Ovis_aries
ENSSBOG00000022627	-	100	81.728	ENSPPAG00000043177	HNRNPDL	72	81.728	Pan_paniscus
ENSSBOG00000022627	-	100	81.728	ENSPPRG00000013787	HNRNPDL	72	81.728	Panthera_pardus
ENSSBOG00000022627	-	100	81.728	ENSPTIG00000018505	HNRNPDL	100	81.728	Panthera_tigris_altaica
ENSSBOG00000022627	-	100	81.728	ENSPTRG00000016217	HNRNPDL	72	81.728	Pan_troglodytes
ENSSBOG00000022627	-	100	81.728	ENSPANG00000004761	HNRNPDL	72	81.728	Papio_anubis
ENSSBOG00000022627	-	98	62.976	ENSPKIG00000025514	hnrnpdl	97	62.799	Paramormyrops_kingsleyae
ENSSBOG00000022627	-	100	77.228	ENSPSIG00000016746	HNRNPDL	90	77.228	Pelodiscus_sinensis
ENSSBOG00000022627	-	96	81.041	ENSPEMG00000016545	-	92	81.250	Peromyscus_maniculatus_bairdii
ENSSBOG00000022627	-	100	81.395	ENSPCIG00000003089	-	72	81.395	Phascolarctos_cinereus
ENSSBOG00000022627	-	65	58.738	ENSPCIG00000009814	-	57	70.199	Phascolarctos_cinereus
ENSSBOG00000022627	-	100	81.728	ENSPPYG00000014886	HNRNPDL	72	81.728	Pongo_abelii
ENSSBOG00000022627	-	96	81.413	ENSPCAG00000011543	HNRNPDL	65	81.618	Procavia_capensis
ENSSBOG00000022627	-	100	81.395	ENSPCOG00000019831	-	72	81.395	Propithecus_coquereli
ENSSBOG00000022627	-	100	71.761	ENSPVAG00000006816	HNRNPDL	72	71.761	Pteropus_vampyrus
ENSSBOG00000022627	-	92	57.353	ENSPNAG00000016380	hnrnpdl	80	60.084	Pygocentrus_nattereri
ENSSBOG00000022627	-	100	79.734	ENSRNOG00000002270	Hnrnpdl	92	75.421	Rattus_norvegicus
ENSSBOG00000022627	-	100	81.728	ENSRBIG00000030310	HNRNPDL	72	81.728	Rhinopithecus_bieti
ENSSBOG00000022627	-	100	81.728	ENSRROG00000034174	HNRNPDL	72	81.728	Rhinopithecus_roxellana
ENSSBOG00000022627	-	100	81.395	ENSSHAG00000013616	-	80	81.395	Sarcophilus_harrisii
ENSSBOG00000022627	-	100	62.457	ENSSFOG00015005893	hnrnpdl	97	63.823	Scleropages_formosus
ENSSBOG00000022627	-	96	75.104	ENSSARG00000009961	-	98	75.309	Sorex_araneus
ENSSBOG00000022627	-	100	69.637	ENSSPUG00000013700	HNRNPDL	100	70.627	Sphenodon_punctatus
ENSSBOG00000022627	-	99	43.643	ENSSSCG00000012473	-	55	57.962	Sus_scrofa
ENSSBOG00000022627	-	100	81.728	ENSSSCG00000037245	-	72	81.728	Sus_scrofa
ENSSBOG00000022627	-	96	76.208	ENSTGUG00000002850	HNRNPDL	100	76.471	Taeniopygia_guttata
ENSSBOG00000022627	-	94	80.634	ENSTBEG00000002817	-	72	80.634	Tupaia_belangeri
ENSSBOG00000022627	-	100	77.076	ENSTTRG00000001793	-	72	77.076	Tursiops_truncatus
ENSSBOG00000022627	-	100	81.728	ENSUAMG00000011358	HNRNPDL	72	81.728	Ursus_americanus
ENSSBOG00000022627	-	100	81.728	ENSUMAG00000008681	HNRNPDL	72	81.728	Ursus_maritimus
ENSSBOG00000022627	-	95	71.429	ENSVPAG00000002422	-	100	71.691	Vicugna_pacos
ENSSBOG00000022627	-	75	57.692	ENSVVUG00000001421	-	95	57.692	Vulpes_vulpes
ENSSBOG00000022627	-	100	72.876	ENSVVUG00000013596	-	100	71.569	Vulpes_vulpes
ENSSBOG00000022627	-	100	81.728	ENSVVUG00000024653	HNRNPDL	72	81.728	Vulpes_vulpes
ENSSBOG00000022627	-	99	66.333	ENSXETG00000023026	hnrnpdl	100	65.667	Xenopus_tropicalis