EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000022652 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 3657 bases
Position: chrJH378310.1:727753-731409
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011738	RRM_1	PF00076.22	2e-14	1	1
ENSSBOP00000011744	RRM_1	PF00076.22	2.1e-14	1	1
ENSSBOP00000011738	RRM_3	PF08777.11	1.7e-12	1	1
ENSSBOP00000011744	RRM_3	PF08777.11	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000028524	-	1452	-	ENSSBOP00000011738	483 (aa)	-	A0A2K6SWF9
ENSSBOT00000028530	-	1467	-	ENSSBOP00000011744	488 (aa)	-	A0A2K6SWG5

Gene Model

Click here to download ENSSBOG00000022652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000022652	-	95	73.694	ENSSBOG00000030886	-	95	74.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022652	-	95	72.793	ENSG00000174720	LARP7	97	75.658	Homo_sapiens
ENSSBOG00000022652	-	98	43.617	ENSAPOG00000014570	larp7	90	46.512	Acanthochromis_polyacanthus
ENSSBOG00000022652	-	95	67.207	ENSAMEG00000015642	LARP7	95	67.207	Ailuropoda_melanoleuca
ENSSBOG00000022652	-	97	42.987	ENSACIG00000023850	larp7	95	42.272	Amphilophus_citrinellus
ENSSBOG00000022652	-	95	44.078	ENSAOCG00000016160	larp7	90	45.243	Amphiprion_ocellaris
ENSSBOG00000022652	-	95	44.078	ENSAPEG00000021823	larp7	90	45.243	Amphiprion_percula
ENSSBOG00000022652	-	99	42.732	ENSATEG00000016238	larp7	90	44.571	Anabas_testudineus
ENSSBOG00000022652	-	98	54.407	ENSAPLG00000012887	LARP7	95	55.304	Anas_platyrhynchos
ENSSBOG00000022652	-	99	52.525	ENSACAG00000010662	LARP7	91	53.439	Anolis_carolinensis
ENSSBOG00000022652	-	93	68.421	ENSANAG00000022318	-	88	69.433	Aotus_nancymaae
ENSSBOG00000022652	-	95	74.359	ENSANAG00000031139	-	95	74.359	Aotus_nancymaae
ENSSBOG00000022652	-	97	42.634	ENSACLG00000023184	larp7	88	44.340	Astatotilapia_calliptera
ENSSBOG00000022652	-	98	43.423	ENSAMXG00000002549	larp7	95	43.462	Astyanax_mexicanus
ENSSBOG00000022652	-	95	65.045	ENSBTAG00000009632	LARP7	93	65.045	Bos_taurus
ENSSBOG00000022652	-	95	73.333	ENSCJAG00000003711	LARP7	95	73.333	Callithrix_jacchus
ENSSBOG00000022652	-	95	67.446	ENSCAFG00000011715	LARP7	95	67.446	Canis_familiaris
ENSSBOG00000022652	-	95	67.387	ENSCAFG00020017225	LARP7	95	67.387	Canis_lupus_dingo
ENSSBOG00000022652	-	100	57.678	ENSCHIG00000013971	-	90	62.218	Capra_hircus
ENSSBOG00000022652	-	95	65.468	ENSCHIG00000014163	-	95	65.468	Capra_hircus
ENSSBOG00000022652	-	95	61.706	ENSTSYG00000035188	-	98	61.706	Carlito_syrichta
ENSSBOG00000022652	-	89	68.031	ENSTSYG00000006769	-	94	68.031	Carlito_syrichta
ENSSBOG00000022652	-	95	57.996	ENSCAPG00000009328	LARP7	95	58.767	Cavia_aperea
ENSSBOG00000022652	-	95	61.664	ENSCPOG00000011830	LARP7	96	62.387	Cavia_porcellus
ENSSBOG00000022652	-	96	71.429	ENSCCAG00000023563	-	99	71.429	Cebus_capucinus
ENSSBOG00000022652	-	95	74.234	ENSCCAG00000026787	-	95	74.775	Cebus_capucinus
ENSSBOG00000022652	-	95	72.252	ENSCATG00000043535	LARP7	95	72.252	Cercocebus_atys
ENSSBOG00000022652	-	95	64.587	ENSCLAG00000005894	LARP7	96	65.321	Chinchilla_lanigera
ENSSBOG00000022652	-	95	72.252	ENSCSAG00000003810	LARP7	95	72.252	Chlorocebus_sabaeus
ENSSBOG00000022652	-	93	57.663	ENSCHOG00000008967	-	96	57.663	Choloepus_hoffmanni
ENSSBOG00000022652	-	100	63.746	ENSCHOG00000002379	-	100	64.261	Choloepus_hoffmanni
ENSSBOG00000022652	-	99	56.122	ENSCPBG00000004919	LARP7	96	56.545	Chrysemys_picta_bellii
ENSSBOG00000022652	-	95	72.122	ENSCANG00000031482	LARP7	94	72.122	Colobus_angolensis_palliatus
ENSSBOG00000022652	-	95	62.590	ENSCGRG00001025050	-	96	62.724	Cricetulus_griseus_chok1gshd
ENSSBOG00000022652	-	88	61.099	ENSCGRG00001012747	-	93	61.099	Cricetulus_griseus_chok1gshd
ENSSBOG00000022652	-	89	60.121	ENSCGRG00000007642	-	91	60.121	Cricetulus_griseus_crigri
ENSSBOG00000022652	-	89	57.755	ENSCGRG00000001141	-	92	57.895	Cricetulus_griseus_crigri
ENSSBOG00000022652	-	98	42.021	ENSCSEG00000009088	larp7	90	43.462	Cynoglossus_semilaevis
ENSSBOG00000022652	-	98	43.321	ENSCVAG00000016852	larp7	94	43.446	Cyprinodon_variegatus
ENSSBOG00000022652	-	99	44.123	ENSDARG00000017315	larp7	94	43.551	Danio_rerio
ENSSBOG00000022652	-	95	63.799	ENSDNOG00000013761	LARP7	95	65.412	Dasypus_novemcinctus
ENSSBOG00000022652	-	95	65.225	ENSDORG00000008896	-	95	65.405	Dipodomys_ordii
ENSSBOG00000022652	-	93	64.797	ENSETEG00000011692	LARP7	89	64.990	Echinops_telfairi
ENSSBOG00000022652	-	66	52.381	ENSEBUG00000013808	larp7	77	38.491	Eptatretus_burgeri
ENSSBOG00000022652	-	95	66.187	ENSEASG00005005592	LARP7	95	66.727	Equus_asinus_asinus
ENSSBOG00000022652	-	95	66.727	ENSECAG00000000834	LARP7	95	67.266	Equus_caballus
ENSSBOG00000022652	-	89	64.902	ENSEEUG00000012824	LARP7	92	64.902	Erinaceus_europaeus
ENSSBOG00000022652	-	95	42.960	ENSELUG00000015341	larp7	88	54.396	Esox_lucius
ENSSBOG00000022652	-	95	66.727	ENSFCAG00000031966	LARP7	95	66.727	Felis_catus
ENSSBOG00000022652	-	98	56.089	ENSFALG00000000972	LARP7	93	55.986	Ficedula_albicollis
ENSSBOG00000022652	-	95	64.505	ENSFDAG00000014048	-	96	64.505	Fukomys_damarensis
ENSSBOG00000022652	-	95	59.239	ENSFDAG00000011855	-	96	59.783	Fukomys_damarensis
ENSSBOG00000022652	-	99	42.301	ENSFHEG00000021652	larp7	90	44.701	Fundulus_heteroclitus
ENSSBOG00000022652	-	99	54.118	ENSGALG00000012048	LARP7	95	55.106	Gallus_gallus
ENSSBOG00000022652	-	99	42.430	ENSGAFG00000015400	larp7	95	43.590	Gambusia_affinis
ENSSBOG00000022652	-	97	40.675	ENSGACG00000019618	larp7	95	41.049	Gasterosteus_aculeatus
ENSSBOG00000022652	-	95	56.370	ENSGAGG00000024520	LARP7	95	56.894	Gopherus_agassizii
ENSSBOG00000022652	-	95	72.973	ENSGGOG00000023567	-	95	72.973	Gorilla_gorilla
ENSSBOG00000022652	-	90	74.059	ENSGGOG00000006438	-	97	73.913	Gorilla_gorilla
ENSSBOG00000022652	-	97	43.328	ENSHBUG00000019223	larp7	88	44.717	Haplochromis_burtoni
ENSSBOG00000022652	-	95	64.928	ENSHGLG00000002716	LARP7	96	64.928	Heterocephalus_glaber_female
ENSSBOG00000022652	-	95	64.928	ENSHGLG00100000332	LARP7	96	64.928	Heterocephalus_glaber_male
ENSSBOG00000022652	-	95	43.849	ENSHCOG00000000664	LARP7	96	43.527	Hippocampus_comes
ENSSBOG00000022652	-	97	43.517	ENSIPUG00000019886	larp7	94	44.304	Ictalurus_punctatus
ENSSBOG00000022652	-	95	68.592	ENSSTOG00000011789	LARP7	95	68.592	Ictidomys_tridecemlineatus
ENSSBOG00000022652	-	99	65.210	ENSJJAG00000000257	-	98	65.263	Jaculus_jaculus
ENSSBOG00000022652	-	99	40.283	ENSLBEG00000020062	larp7	90	42.610	Labrus_bergylta
ENSSBOG00000022652	-	98	46.701	ENSLACG00000013744	LARP7	97	47.377	Latimeria_chalumnae
ENSSBOG00000022652	-	94	38.241	ENSLOCG00000011608	larp7	90	38.241	Lepisosteus_oculatus
ENSSBOG00000022652	-	95	67.384	ENSLAFG00000015769	LARP7	98	67.714	Loxodonta_africana
ENSSBOG00000022652	-	95	72.252	ENSMFAG00000036506	LARP7	95	72.252	Macaca_fascicularis
ENSSBOG00000022652	-	95	72.252	ENSMMUG00000017911	LARP7	95	72.252	Macaca_mulatta
ENSSBOG00000022652	-	95	72.432	ENSMNEG00000034758	LARP7	100	75.397	Macaca_nemestrina
ENSSBOG00000022652	-	95	72.432	ENSMLEG00000026154	LARP7	95	72.432	Mandrillus_leucophaeus
ENSSBOG00000022652	-	98	42.451	ENSMAMG00000005835	larp7	95	42.287	Mastacembelus_armatus
ENSSBOG00000022652	-	97	42.634	ENSMZEG00005002084	larp7	88	44.340	Maylandia_zebra
ENSSBOG00000022652	-	99	53.963	ENSMGAG00000010947	LARP7	95	55.124	Meleagris_gallopavo
ENSSBOG00000022652	-	95	56.214	ENSMAUG00000005625	-	95	56.952	Mesocricetus_auratus
ENSSBOG00000022652	-	95	68.108	ENSMICG00000031035	LARP7	95	68.108	Microcebus_murinus
ENSSBOG00000022652	-	95	62.342	ENSMOCG00000012519	-	96	62.478	Microtus_ochrogaster
ENSSBOG00000022652	-	93	62.992	ENSMOCG00000015761	-	100	63.189	Microtus_ochrogaster
ENSSBOG00000022652	-	95	57.093	ENSMODG00000005669	LARP7	95	57.443	Monodelphis_domestica
ENSSBOG00000022652	-	95	60.791	MGP_CAROLIEiJ_G0025613	-	96	61.290	Mus_caroli
ENSSBOG00000022652	-	95	60.791	ENSMUSG00000027968	Larp7	96	61.470	Mus_musculus
ENSSBOG00000022652	-	95	60.541	MGP_PahariEiJ_G0027060	-	96	61.221	Mus_pahari
ENSSBOG00000022652	-	95	61.041	MGP_SPRETEiJ_G0026566	Larp7	96	61.717	Mus_spretus
ENSSBOG00000022652	-	95	66.306	ENSMPUG00000008331	-	95	66.306	Mustela_putorius_furo
ENSSBOG00000022652	-	95	64.962	ENSMPUG00000018052	-	100	64.205	Mustela_putorius_furo
ENSSBOG00000022652	-	89	61.753	ENSMLUG00000027214	LARP7	100	61.753	Myotis_lucifugus
ENSSBOG00000022652	-	95	61.759	ENSNGAG00000007368	-	96	61.939	Nannospalax_galili
ENSSBOG00000022652	-	95	72.072	ENSNLEG00000016354	LARP7	94	72.072	Nomascus_leucogenys
ENSSBOG00000022652	-	87	60.752	ENSMEUG00000004739	LARP7	94	60.334	Notamacropus_eugenii
ENSSBOG00000022652	-	85	64.662	ENSOPRG00000009594	-	87	64.662	Ochotona_princeps
ENSSBOG00000022652	-	90	61.887	ENSODEG00000011121	LARP7	94	62.642	Octodon_degus
ENSSBOG00000022652	-	95	43.358	ENSONIG00000008763	larp7	90	44.649	Oreochromis_niloticus
ENSSBOG00000022652	-	98	56.947	ENSOANG00000009298	LARP7	94	57.570	Ornithorhynchus_anatinus
ENSSBOG00000022652	-	95	64.685	ENSOCUG00000007073	LARP7	95	65.045	Oryctolagus_cuniculus
ENSSBOG00000022652	-	93	45.287	ENSORLG00000004978	larp7	88	44.444	Oryzias_latipes
ENSSBOG00000022652	-	93	44.444	ENSORLG00020013825	larp7	87	44.444	Oryzias_latipes_hni
ENSSBOG00000022652	-	98	44.815	ENSOMEG00000006920	larp7	95	44.841	Oryzias_melastigma
ENSSBOG00000022652	-	95	66.846	ENSOGAG00000001643	LARP7	95	66.846	Otolemur_garnettii
ENSSBOG00000022652	-	95	65.889	ENSOARG00000001809	LARP7	95	65.889	Ovis_aries
ENSSBOG00000022652	-	95	72.924	ENSPPAG00000038420	LARP7	94	72.924	Pan_paniscus
ENSSBOG00000022652	-	95	66.906	ENSPPRG00000023256	LARP7	95	66.906	Panthera_pardus
ENSSBOG00000022652	-	90	65.226	ENSPTIG00000021146	LARP7	92	65.103	Panthera_tigris_altaica
ENSSBOG00000022652	-	95	72.793	ENSPTRG00000016380	LARP7	95	72.793	Pan_troglodytes
ENSSBOG00000022652	-	95	72.613	ENSPANG00000006701	LARP7	94	72.613	Papio_anubis
ENSSBOG00000022652	-	97	44.345	ENSPKIG00000023484	larp7	89	44.828	Paramormyrops_kingsleyae
ENSSBOG00000022652	-	97	53.541	ENSPSIG00000014419	LARP7	94	55.319	Pelodiscus_sinensis
ENSSBOG00000022652	-	95	61.854	ENSPEMG00000013978	-	96	62.167	Peromyscus_maniculatus_bairdii
ENSSBOG00000022652	-	95	56.098	ENSPCIG00000020284	LARP7	92	60.909	Phascolarctos_cinereus
ENSSBOG00000022652	-	99	43.784	ENSPFOG00000000265	larp7	95	43.948	Poecilia_formosa
ENSSBOG00000022652	-	99	43.784	ENSPLAG00000012181	larp7	95	43.948	Poecilia_latipinna
ENSSBOG00000022652	-	99	43.784	ENSPMEG00000007182	larp7	95	43.948	Poecilia_mexicana
ENSSBOG00000022652	-	99	42.478	ENSPREG00000019513	larp7	95	42.518	Poecilia_reticulata
ENSSBOG00000022652	-	95	72.793	ENSPPYG00000015010	LARP7	95	72.793	Pongo_abelii
ENSSBOG00000022652	-	65	92.308	ENSPCAG00000003373	-	67	92.308	Procavia_capensis
ENSSBOG00000022652	-	66	69.867	ENSPCOG00000023946	LARP7	73	69.867	Propithecus_coquereli
ENSSBOG00000022652	-	99	62.697	ENSPVAG00000000282	LARP7	96	62.770	Pteropus_vampyrus
ENSSBOG00000022652	-	95	44.015	ENSPNAG00000017554	larp7	95	44.815	Pygocentrus_nattereri
ENSSBOG00000022652	-	95	59.246	ENSRNOG00000048989	Larp7	99	64.599	Rattus_norvegicus
ENSSBOG00000022652	-	78	73.198	ENSRBIG00000031916	LARP7	93	72.973	Rhinopithecus_bieti
ENSSBOG00000022652	-	95	71.892	ENSRROG00000033414	LARP7	95	71.892	Rhinopithecus_roxellana
ENSSBOG00000022652	-	95	55.401	ENSSHAG00000008153	LARP7	95	57.293	Sarcophilus_harrisii
ENSSBOG00000022652	-	97	43.828	ENSSFOG00015019344	larp7	95	44.080	Scleropages_formosus
ENSSBOG00000022652	-	95	44.942	ENSSMAG00000011296	larp7	90	45.010	Scophthalmus_maximus
ENSSBOG00000022652	-	98	43.262	ENSSDUG00000007045	larp7	95	42.831	Seriola_dumerili
ENSSBOG00000022652	-	54	63.725	ENSSARG00000000190	-	99	63.725	Sorex_araneus
ENSSBOG00000022652	-	99	43.292	ENSSPAG00000016066	larp7	90	45.720	Stegastes_partitus
ENSSBOG00000022652	-	95	66.727	ENSSSCG00000009119	LARP7	95	66.727	Sus_scrofa
ENSSBOG00000022652	-	99	53.741	ENSTGUG00000001804	LARP7	95	54.902	Taeniopygia_guttata
ENSSBOG00000022652	-	98	39.852	ENSTRUG00000004996	larp7	96	41.683	Takifugu_rubripes
ENSSBOG00000022652	-	95	39.219	ENSTNIG00000007183	larp7	95	39.033	Tetraodon_nigroviridis
ENSSBOG00000022652	-	95	60.721	ENSTBEG00000009188	LARP7	96	60.862	Tupaia_belangeri
ENSSBOG00000022652	-	93	67.437	ENSTTRG00000005233	LARP7	99	68.979	Tursiops_truncatus
ENSSBOG00000022652	-	95	66.727	ENSUAMG00000000836	LARP7	95	66.727	Ursus_americanus
ENSSBOG00000022652	-	94	65.876	ENSUMAG00000002263	LARP7	93	65.876	Ursus_maritimus
ENSSBOG00000022652	-	95	66.667	ENSVPAG00000010502	LARP7	95	66.667	Vicugna_pacos
ENSSBOG00000022652	-	95	67.568	ENSVVUG00000002274	LARP7	95	67.568	Vulpes_vulpes
ENSSBOG00000022652	-	99	45.743	ENSXETG00000024097	larp7	95	45.804	Xenopus_tropicalis
ENSSBOG00000022652	-	99	43.297	ENSXCOG00000004883	larp7	98	43.376	Xiphophorus_couchianus
ENSSBOG00000022652	-	99	42.806	ENSXMAG00000008479	larp7	95	44.220	Xiphophorus_maculatus