EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000022679 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 3493 bases
Position: chrJH378174.1:834586-838078
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011730	RRM_1	PF00076.22	1.9e-53	1	3
ENSSBOP00000011730	RRM_1	PF00076.22	1.9e-53	2	3
ENSSBOP00000011730	RRM_1	PF00076.22	1.9e-53	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000028516	-	2472	-	ENSSBOP00000011730	823 (aa)	-	A0A2K6SWI4

Gene Model

Click here to download ENSSBOG00000022679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000022679	-	99	81.430	ENSSBOG00000021434	-	88	82.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022679	-	99	81.776	ENSG00000122965	RBM19	88	83.175	Homo_sapiens
ENSSBOG00000022679	-	99	50.285	ENSAPOG00000010507	rbm19	88	50.827	Acanthochromis_polyacanthus
ENSSBOG00000022679	-	99	70.805	ENSAMEG00000008544	RBM19	88	71.986	Ailuropoda_melanoleuca
ENSSBOG00000022679	-	99	50.861	ENSACIG00000017780	rbm19	89	51.122	Amphilophus_citrinellus
ENSSBOG00000022679	-	99	51.037	ENSAOCG00000008554	rbm19	88	50.827	Amphiprion_ocellaris
ENSSBOG00000022679	-	99	50.519	ENSAPEG00000022381	rbm19	87	50.178	Amphiprion_percula
ENSSBOG00000022679	-	98	50.174	ENSATEG00000007000	rbm19	87	50.179	Anabas_testudineus
ENSSBOG00000022679	-	98	54.598	ENSAPLG00000015319	RBM19	93	55.266	Anas_platyrhynchos
ENSSBOG00000022679	-	99	55.856	ENSACAG00000005065	RBM19	88	55.365	Anolis_carolinensis
ENSSBOG00000022679	-	99	85.006	ENSANAG00000024136	RBM19	88	86.493	Aotus_nancymaae
ENSSBOG00000022679	-	99	47.452	ENSACLG00000001399	rbm19	95	47.368	Astatotilapia_calliptera
ENSSBOG00000022679	-	60	51.953	ENSAMXG00000017073	rbm19	62	52.254	Astyanax_mexicanus
ENSSBOG00000022679	-	99	71.771	ENSBTAG00000031824	RBM19	88	73.325	Bos_taurus
ENSSBOG00000022679	-	85	41.912	WBGene00004315	rbd-1	87	41.912	Caenorhabditis_elegans
ENSSBOG00000022679	-	99	83.968	ENSCJAG00000009798	RBM19	88	85.427	Callithrix_jacchus
ENSSBOG00000022679	-	99	71.889	ENSCAFG00000009146	RBM19	87	73.168	Canis_familiaris
ENSSBOG00000022679	-	99	72.005	ENSCAFG00020017862	RBM19	87	73.286	Canis_lupus_dingo
ENSSBOG00000022679	-	99	72.477	ENSCHIG00000014917	RBM19	88	73.703	Capra_hircus
ENSSBOG00000022679	-	97	75.768	ENSTSYG00000007207	RBM19	95	76.241	Carlito_syrichta
ENSSBOG00000022679	-	99	69.683	ENSCAPG00000006869	RBM19	87	70.859	Cavia_aperea
ENSSBOG00000022679	-	99	69.805	ENSCPOG00000026629	RBM19	88	70.838	Cavia_porcellus
ENSSBOG00000022679	-	93	80.074	ENSCCAG00000026637	-	99	80.074	Cebus_capucinus
ENSSBOG00000022679	-	99	84.660	ENSCCAG00000021665	-	88	86.137	Cebus_capucinus
ENSSBOG00000022679	-	98	81.404	ENSCATG00000035841	RBM19	88	82.812	Cercocebus_atys
ENSSBOG00000022679	-	99	69.897	ENSCLAG00000009965	RBM19	88	71.630	Chinchilla_lanigera
ENSSBOG00000022679	-	99	76.374	ENSCSAG00000002352	RBM19	82	83.382	Chlorocebus_sabaeus
ENSSBOG00000022679	-	99	58.229	ENSCPBG00000011990	RBM19	92	60.094	Chrysemys_picta_bellii
ENSSBOG00000022679	-	74	45.977	ENSCING00000023076	-	83	45.977	Ciona_intestinalis
ENSSBOG00000022679	-	99	81.776	ENSCANG00000035927	RBM19	88	83.175	Colobus_angolensis_palliatus
ENSSBOG00000022679	-	99	69.690	ENSCGRG00001000323	Rbm19	88	70.318	Cricetulus_griseus_chok1gshd
ENSSBOG00000022679	-	99	69.690	ENSCGRG00000010371	Rbm19	88	70.318	Cricetulus_griseus_crigri
ENSSBOG00000022679	-	99	48.894	ENSCSEG00000017436	rbm19	88	51.054	Cynoglossus_semilaevis
ENSSBOG00000022679	-	99	49.310	ENSCVAG00000000300	rbm19	88	50.059	Cyprinodon_variegatus
ENSSBOG00000022679	-	99	51.027	ENSDARG00000042590	rbm19	95	51.114	Danio_rerio
ENSSBOG00000022679	-	99	70.507	ENSDNOG00000024534	RBM19	85	72.156	Dasypus_novemcinctus
ENSSBOG00000022679	-	99	68.171	ENSDORG00000008549	Rbm19	91	69.286	Dipodomys_ordii
ENSSBOG00000022679	-	88	35.935	FBgn0036018	CG3335	86	37.179	Drosophila_melanogaster
ENSSBOG00000022679	-	88	43.451	ENSEBUG00000008521	-	94	43.325	Eptatretus_burgeri
ENSSBOG00000022679	-	99	74.770	ENSEASG00005009452	RBM19	88	76.066	Equus_asinus_asinus
ENSSBOG00000022679	-	99	75.172	ENSECAG00000023716	RBM19	89	76.478	Equus_caballus
ENSSBOG00000022679	-	99	50.569	ENSELUG00000012561	rbm19	87	50.521	Esox_lucius
ENSSBOG00000022679	-	99	70.379	ENSFCAG00000002962	RBM19	87	72.544	Felis_catus
ENSSBOG00000022679	-	99	57.028	ENSFALG00000007768	RBM19	88	57.360	Ficedula_albicollis
ENSSBOG00000022679	-	99	69.116	ENSFDAG00000004629	RBM19	88	71.614	Fukomys_damarensis
ENSSBOG00000022679	-	99	50.115	ENSFHEG00000012578	rbm19	87	49.703	Fundulus_heteroclitus
ENSSBOG00000022679	-	99	48.614	ENSGMOG00000013120	rbm19	90	49.348	Gadus_morhua
ENSSBOG00000022679	-	99	57.274	ENSGALG00000008289	RBM19	88	58.442	Gallus_gallus
ENSSBOG00000022679	-	99	49.770	ENSGAFG00000012337	rbm19	87	49.941	Gambusia_affinis
ENSSBOG00000022679	-	99	49.026	ENSGACG00000009462	rbm19	91	48.783	Gasterosteus_aculeatus
ENSSBOG00000022679	-	58	61.400	ENSGAGG00000019457	RBM19	81	62.815	Gopherus_agassizii
ENSSBOG00000022679	-	99	81.776	ENSGGOG00000007371	RBM19	88	83.175	Gorilla_gorilla
ENSSBOG00000022679	-	99	50.000	ENSHBUG00000009047	rbm19	87	50.476	Haplochromis_burtoni
ENSSBOG00000022679	-	99	71.727	ENSHGLG00000010899	RBM19	88	73.421	Heterocephalus_glaber_female
ENSSBOG00000022679	-	99	70.218	ENSHGLG00100017936	RBM19	88	72.556	Heterocephalus_glaber_male
ENSSBOG00000022679	-	99	51.098	ENSHCOG00000016446	rbm19	88	51.367	Hippocampus_comes
ENSSBOG00000022679	-	99	49.658	ENSIPUG00000023849	rbm19	95	51.054	Ictalurus_punctatus
ENSSBOG00000022679	-	99	51.425	ENSKMAG00000014807	rbm19	83	58.883	Kryptolebias_marmoratus
ENSSBOG00000022679	-	99	49.597	ENSLBEG00000012897	rbm19	87	49.467	Labrus_bergylta
ENSSBOG00000022679	-	73	51.567	ENSLACG00000012030	RBM19	91	51.959	Latimeria_chalumnae
ENSSBOG00000022679	-	99	51.794	ENSLOCG00000008341	rbm19	88	53.107	Lepisosteus_oculatus
ENSSBOG00000022679	-	97	74.584	ENSLAFG00000004187	RBM19	99	74.584	Loxodonta_africana
ENSSBOG00000022679	-	99	81.892	ENSMFAG00000046091	RBM19	85	83.294	Macaca_fascicularis
ENSSBOG00000022679	-	99	81.776	ENSMMUG00000010496	RBM19	88	83.175	Macaca_mulatta
ENSSBOG00000022679	-	96	82.572	ENSMNEG00000028452	RBM19	99	82.572	Macaca_nemestrina
ENSSBOG00000022679	-	99	78.670	ENSMLEG00000034550	RBM19	88	79.976	Mandrillus_leucophaeus
ENSSBOG00000022679	-	99	51.435	ENSMAMG00000014397	rbm19	88	51.930	Mastacembelus_armatus
ENSSBOG00000022679	-	99	50.741	ENSMZEG00005016607	rbm19	88	51.575	Maylandia_zebra
ENSSBOG00000022679	-	65	48.270	ENSMGAG00000010087	RBM19	87	46.445	Meleagris_gallopavo
ENSSBOG00000022679	-	99	70.737	ENSMAUG00000019290	Rbm19	88	71.749	Mesocricetus_auratus
ENSSBOG00000022679	-	99	75.029	ENSMICG00000014423	RBM19	88	76.950	Microcebus_murinus
ENSSBOG00000022679	-	99	49.367	ENSMMOG00000017839	rbm19	88	50.059	Mola_mola
ENSSBOG00000022679	-	99	62.616	ENSMODG00000003597	RBM19	88	63.734	Monodelphis_domestica
ENSSBOG00000022679	-	99	51.435	ENSMALG00000012647	rbm19	88	51.415	Monopterus_albus
ENSSBOG00000022679	-	99	70.081	MGP_CAROLIEiJ_G0027656	Rbm19	96	71.158	Mus_caroli
ENSSBOG00000022679	-	99	69.540	ENSMUSG00000029594	Rbm19	96	70.755	Mus_musculus
ENSSBOG00000022679	-	99	70.000	MGP_PahariEiJ_G0024238	Rbm19	96	71.462	Mus_pahari
ENSSBOG00000022679	-	99	69.575	MGP_SPRETEiJ_G0028656	Rbm19	88	70.671	Mus_spretus
ENSSBOG00000022679	-	99	70.872	ENSMPUG00000002694	RBM19	87	72.288	Mustela_putorius_furo
ENSSBOG00000022679	-	99	73.977	ENSMLUG00000015075	RBM19	88	75.029	Myotis_lucifugus
ENSSBOG00000022679	-	99	70.751	ENSNGAG00000009076	Rbm19	88	72.170	Nannospalax_galili
ENSSBOG00000022679	-	99	50.517	ENSNBRG00000005913	rbm19	89	50.652	Neolamprologus_brichardi
ENSSBOG00000022679	-	99	82.122	ENSNLEG00000000190	RBM19	88	83.531	Nomascus_leucogenys
ENSSBOG00000022679	-	93	56.379	ENSMEUG00000004045	RBM19	84	56.311	Notamacropus_eugenii
ENSSBOG00000022679	-	99	71.904	ENSOPRG00000012064	RBM19	88	73.113	Ochotona_princeps
ENSSBOG00000022679	-	99	66.512	ENSODEG00000012977	RBM19	87	68.578	Octodon_degus
ENSSBOG00000022679	-	99	51.009	ENSONIG00000013576	rbm19	88	51.515	Oreochromis_niloticus
ENSSBOG00000022679	-	99	68.568	ENSOCUG00000009398	RBM19	88	69.701	Oryctolagus_cuniculus
ENSSBOG00000022679	-	99	51.602	ENSORLG00000008077	rbm19	90	52.588	Oryzias_latipes
ENSSBOG00000022679	-	99	50.000	ENSORLG00020013187	rbm19	90	50.814	Oryzias_latipes_hni
ENSSBOG00000022679	-	99	51.076	ENSORLG00015001774	rbm19	88	51.345	Oryzias_latipes_hsok
ENSSBOG00000022679	-	99	50.396	ENSOMEG00000003334	rbm19	88	50.941	Oryzias_melastigma
ENSSBOG00000022679	-	97	76.596	ENSOGAG00000000602	RBM19	99	76.596	Otolemur_garnettii
ENSSBOG00000022679	-	99	72.445	ENSOARG00000006827	RBM19	88	73.672	Ovis_aries
ENSSBOG00000022679	-	99	81.912	ENSPPAG00000043712	RBM19	88	83.314	Pan_paniscus
ENSSBOG00000022679	-	99	70.528	ENSPPRG00000023027	RBM19	87	71.834	Panthera_pardus
ENSSBOG00000022679	-	99	63.876	ENSPTIG00000011096	RBM19	87	65.166	Panthera_tigris_altaica
ENSSBOG00000022679	-	99	81.797	ENSPTRG00000005494	RBM19	88	83.195	Pan_troglodytes
ENSSBOG00000022679	-	99	81.661	ENSPANG00000004795	RBM19	92	82.903	Papio_anubis
ENSSBOG00000022679	-	99	49.827	ENSPKIG00000017095	rbm19	88	50.411	Paramormyrops_kingsleyae
ENSSBOG00000022679	-	92	56.654	ENSPSIG00000008191	RBM19	92	57.736	Pelodiscus_sinensis
ENSSBOG00000022679	-	81	60.667	ENSPMGG00000019087	rbm19	89	52.850	Periophthalmus_magnuspinnatus
ENSSBOG00000022679	-	99	69.355	ENSPEMG00000018058	Rbm19	88	70.769	Peromyscus_maniculatus_bairdii
ENSSBOG00000022679	-	99	62.874	ENSPCIG00000028861	RBM19	88	64.033	Phascolarctos_cinereus
ENSSBOG00000022679	-	99	50.572	ENSPFOG00000015300	rbm19	88	51.655	Poecilia_formosa
ENSSBOG00000022679	-	99	50.801	ENSPLAG00000000059	rbm19	88	50.946	Poecilia_latipinna
ENSSBOG00000022679	-	99	50.402	ENSPMEG00000018585	rbm19	88	50.587	Poecilia_mexicana
ENSSBOG00000022679	-	99	50.402	ENSPREG00000000978	rbm19	88	50.352	Poecilia_reticulata
ENSSBOG00000022679	-	99	81.294	ENSPPYG00000004993	RBM19	88	82.709	Pongo_abelii
ENSSBOG00000022679	-	60	60.795	ENSPCAG00000005063	-	50	64.935	Procavia_capensis
ENSSBOG00000022679	-	99	75.548	ENSPCOG00000016190	RBM19	88	76.777	Propithecus_coquereli
ENSSBOG00000022679	-	99	70.790	ENSPVAG00000011618	RBM19	88	72.268	Pteropus_vampyrus
ENSSBOG00000022679	-	99	49.264	ENSPNYG00000017434	rbm19	88	50.058	Pundamilia_nyererei
ENSSBOG00000022679	-	99	50.515	ENSPNAG00000012069	rbm19	95	50.293	Pygocentrus_nattereri
ENSSBOG00000022679	-	99	70.069	ENSRNOG00000001397	Rbm19	88	71.059	Rattus_norvegicus
ENSSBOG00000022679	-	99	81.430	ENSRBIG00000041419	RBM19	88	81.161	Rhinopithecus_bieti
ENSSBOG00000022679	-	99	81.546	ENSRROG00000031938	RBM19	88	82.938	Rhinopithecus_roxellana
ENSSBOG00000022679	-	72	34.534	YPR112C	-	69	35.045	Saccharomyces_cerevisiae
ENSSBOG00000022679	-	99	62.587	ENSSHAG00000012256	RBM19	99	63.133	Sarcophilus_harrisii
ENSSBOG00000022679	-	99	48.871	ENSSFOG00015005124	rbm19	88	49.651	Scleropages_formosus
ENSSBOG00000022679	-	99	50.344	ENSSMAG00000011828	rbm19	88	50.649	Scophthalmus_maximus
ENSSBOG00000022679	-	99	50.286	ENSSDUG00000013544	rbm19	88	51.995	Seriola_dumerili
ENSSBOG00000022679	-	86	56.667	ENSSLDG00000025413	rbm19	83	56.021	Seriola_lalandi_dorsalis
ENSSBOG00000022679	-	60	60.624	ENSSPUG00000011064	RBM19	83	59.919	Sphenodon_punctatus
ENSSBOG00000022679	-	97	50.894	ENSSPAG00000018685	rbm19	89	51.490	Stegastes_partitus
ENSSBOG00000022679	-	99	73.157	ENSSSCG00000009868	RBM19	88	74.526	Sus_scrofa
ENSSBOG00000022679	-	99	57.339	ENSTGUG00000009017	RBM19	88	58.962	Taeniopygia_guttata
ENSSBOG00000022679	-	99	48.581	ENSTRUG00000016032	rbm19	88	49.884	Takifugu_rubripes
ENSSBOG00000022679	-	65	91.803	ENSTBEG00000000703	RBM19	63	91.803	Tupaia_belangeri
ENSSBOG00000022679	-	83	71.163	ENSTTRG00000003987	RBM19	73	76.440	Tursiops_truncatus
ENSSBOG00000022679	-	98	72.929	ENSUAMG00000002076	RBM19	87	74.190	Ursus_americanus
ENSSBOG00000022679	-	99	73.072	ENSUMAG00000010816	RBM19	89	74.320	Ursus_maritimus
ENSSBOG00000022679	-	99	72.005	ENSVVUG00000007886	RBM19	87	73.286	Vulpes_vulpes
ENSSBOG00000022679	-	99	52.354	ENSXETG00000017668	rbm19	94	53.008	Xenopus_tropicalis
ENSSBOG00000022679	-	99	49.033	ENSXCOG00000016995	rbm19	88	49.650	Xiphophorus_couchianus
ENSSBOG00000022679	-	99	50.627	ENSXMAG00000007641	rbm19	88	50.467	Xiphophorus_maculatus