EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000022712 (Gene tree)
Gene ID: 101045819
Gene Symbol: EXOSC2
Alias: RRP4|Rrp4p|hRrp4p|p7
Full Name: exosome component 2
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 11134 bases
Position: chrJH378106.1:69909948-69921081
Accession: 17097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000011824	ECR1_N	PF14382.6	6.2e-15	1	1
ENSSBOP00000011821	ECR1_N	PF14382.6	6.4e-15	1	1
ENSSBOP00000011798	ECR1_N	PF14382.6	7.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000028585	EXOSC2-201	2161	XM_003920865	ENSSBOP00000011798	293 (aa)	XP_003920914	A0A2K6SWM2
ENSSBOT00000028608	EXOSC2-202	804	-	ENSSBOP00000011821	267 (aa)	-	A0A2K6SWS1
ENSSBOT00000028611	EXOSC2-203	792	-	ENSSBOP00000011824	263 (aa)	-	A0A2K6SWP1

Gene Model

Click here to download ENSSBOG00000022712's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000022712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000022712	EXOSC2	100	98.976	ENSG00000130713	EXOSC2	100	98.976	Homo_sapiens
ENSSBOG00000022712	EXOSC2	95	75.269	ENSAPOG00000008861	exosc2	97	78.113	Acanthochromis_polyacanthus
ENSSBOG00000022712	EXOSC2	100	96.928	ENSAMEG00000016239	EXOSC2	100	96.928	Ailuropoda_melanoleuca
ENSSBOG00000022712	EXOSC2	100	77.133	ENSACIG00000019054	exosc2	100	77.133	Amphilophus_citrinellus
ENSSBOG00000022712	EXOSC2	100	77.133	ENSAOCG00000004983	exosc2	100	77.133	Amphiprion_ocellaris
ENSSBOG00000022712	EXOSC2	100	77.133	ENSAOCG00000008577	exosc2	100	77.133	Amphiprion_ocellaris
ENSSBOG00000022712	EXOSC2	100	77.133	ENSAPEG00000014088	exosc2	100	77.133	Amphiprion_percula
ENSSBOG00000022712	EXOSC2	100	78.157	ENSATEG00000018680	exosc2	100	78.157	Anabas_testudineus
ENSSBOG00000022712	EXOSC2	96	87.589	ENSAPLG00000012516	EXOSC2	97	87.589	Anas_platyrhynchos
ENSSBOG00000022712	EXOSC2	99	85.274	ENSACAG00000002706	EXOSC2	99	85.274	Anolis_carolinensis
ENSSBOG00000022712	EXOSC2	100	76.451	ENSACLG00000013613	exosc2	100	76.451	Astatotilapia_calliptera
ENSSBOG00000022712	EXOSC2	100	80.000	ENSAMXG00000042605	exosc2	100	80.000	Astyanax_mexicanus
ENSSBOG00000022712	EXOSC2	100	95.904	ENSBTAG00000048071	EXOSC2	100	95.904	Bos_taurus
ENSSBOG00000022712	EXOSC2	91	43.657	WBGene00022232	exos-2	88	43.657	Caenorhabditis_elegans
ENSSBOG00000022712	EXOSC2	100	99.317	ENSCJAG00000020537	EXOSC2	100	99.317	Callithrix_jacchus
ENSSBOG00000022712	EXOSC2	99	96.233	ENSCAFG00000019941	EXOSC2	99	96.233	Canis_familiaris
ENSSBOG00000022712	EXOSC2	100	96.246	ENSCAFG00020024047	EXOSC2	100	96.246	Canis_lupus_dingo
ENSSBOG00000022712	EXOSC2	100	95.904	ENSCHIG00000021398	EXOSC2	100	95.904	Capra_hircus
ENSSBOG00000022712	EXOSC2	100	95.563	ENSTSYG00000001805	EXOSC2	100	95.563	Carlito_syrichta
ENSSBOG00000022712	EXOSC2	100	91.468	ENSCPOG00000005902	EXOSC2	100	91.468	Cavia_porcellus
ENSSBOG00000022712	EXOSC2	100	99.317	ENSCCAG00000019749	EXOSC2	100	99.317	Cebus_capucinus
ENSSBOG00000022712	EXOSC2	100	98.294	ENSCATG00000025389	-	100	98.294	Cercocebus_atys
ENSSBOG00000022712	EXOSC2	100	96.928	ENSCLAG00000006195	EXOSC2	100	97.166	Chinchilla_lanigera
ENSSBOG00000022712	EXOSC2	100	98.294	ENSCSAG00000014760	EXOSC2	100	98.294	Chlorocebus_sabaeus
ENSSBOG00000022712	EXOSC2	100	96.246	ENSCHOG00000000858	EXOSC2	100	96.246	Choloepus_hoffmanni
ENSSBOG00000022712	EXOSC2	99	86.986	ENSCPBG00000022626	EXOSC2	99	86.986	Chrysemys_picta_bellii
ENSSBOG00000022712	EXOSC2	96	61.324	ENSCING00000014934	-	94	61.324	Ciona_intestinalis
ENSSBOG00000022712	EXOSC2	92	61.957	ENSCSAVG00000003684	-	100	61.957	Ciona_savignyi
ENSSBOG00000022712	EXOSC2	100	98.294	ENSCANG00000039828	-	100	98.294	Colobus_angolensis_palliatus
ENSSBOG00000022712	EXOSC2	99	91.096	ENSCANG00000029298	-	99	91.096	Colobus_angolensis_palliatus
ENSSBOG00000022712	EXOSC2	100	94.881	ENSCGRG00001013981	Exosc2	100	94.881	Cricetulus_griseus_chok1gshd
ENSSBOG00000022712	EXOSC2	100	94.881	ENSCGRG00000017629	Exosc2	100	94.881	Cricetulus_griseus_crigri
ENSSBOG00000022712	EXOSC2	100	76.451	ENSCSEG00000016539	exosc2	100	76.451	Cynoglossus_semilaevis
ENSSBOG00000022712	EXOSC2	100	76.109	ENSCVAG00000022260	exosc2	100	76.109	Cyprinodon_variegatus
ENSSBOG00000022712	EXOSC2	100	77.627	ENSDARG00000028688	exosc2	100	77.627	Danio_rerio
ENSSBOG00000022712	EXOSC2	91	97.378	ENSDNOG00000025767	-	100	97.378	Dasypus_novemcinctus
ENSSBOG00000022712	EXOSC2	100	93.515	ENSDORG00000009238	Exosc2	100	93.515	Dipodomys_ordii
ENSSBOG00000022712	EXOSC2	89	61.069	FBgn0034879	Rrp4	89	60.755	Drosophila_melanogaster
ENSSBOG00000022712	EXOSC2	94	78.623	ENSETEG00000016130	-	99	78.623	Echinops_telfairi
ENSSBOG00000022712	EXOSC2	100	96.928	ENSEASG00005008475	EXOSC2	86	96.928	Equus_asinus_asinus
ENSSBOG00000022712	EXOSC2	100	96.928	ENSECAG00000007897	EXOSC2	86	96.928	Equus_caballus
ENSSBOG00000022712	EXOSC2	100	78.305	ENSELUG00000013641	exosc2	100	78.305	Esox_lucius
ENSSBOG00000022712	EXOSC2	100	96.928	ENSFCAG00000025936	EXOSC2	100	96.928	Felis_catus
ENSSBOG00000022712	EXOSC2	98	83.275	ENSFALG00000001446	EXOSC2	98	83.275	Ficedula_albicollis
ENSSBOG00000022712	EXOSC2	100	95.563	ENSFDAG00000017196	EXOSC2	100	95.563	Fukomys_damarensis
ENSSBOG00000022712	EXOSC2	100	76.792	ENSFHEG00000018571	exosc2	100	76.792	Fundulus_heteroclitus
ENSSBOG00000022712	EXOSC2	100	73.038	ENSGMOG00000011785	exosc2	99	73.038	Gadus_morhua
ENSSBOG00000022712	EXOSC2	99	85.616	ENSGALG00000040373	EXOSC2	99	85.616	Gallus_gallus
ENSSBOG00000022712	EXOSC2	99	75.685	ENSGAFG00000010283	exosc2	99	75.685	Gambusia_affinis
ENSSBOG00000022712	EXOSC2	100	75.085	ENSGACG00000016805	exosc2	99	75.301	Gasterosteus_aculeatus
ENSSBOG00000022712	EXOSC2	87	90.588	ENSGAGG00000021026	EXOSC2	96	90.588	Gopherus_agassizii
ENSSBOG00000022712	EXOSC2	100	98.294	ENSGGOG00000010578	EXOSC2	100	98.294	Gorilla_gorilla
ENSSBOG00000022712	EXOSC2	100	77.133	ENSHBUG00000022437	exosc2	100	77.133	Haplochromis_burtoni
ENSSBOG00000022712	EXOSC2	100	96.587	ENSHGLG00000012834	EXOSC2	100	96.761	Heterocephalus_glaber_female
ENSSBOG00000022712	EXOSC2	100	96.587	ENSHGLG00100007092	EXOSC2	100	96.761	Heterocephalus_glaber_male
ENSSBOG00000022712	EXOSC2	100	75.085	ENSHCOG00000019130	exosc2	100	75.085	Hippocampus_comes
ENSSBOG00000022712	EXOSC2	100	77.551	ENSIPUG00000015397	exosc2	100	77.551	Ictalurus_punctatus
ENSSBOG00000022712	EXOSC2	100	96.246	ENSSTOG00000005999	EXOSC2	100	96.246	Ictidomys_tridecemlineatus
ENSSBOG00000022712	EXOSC2	100	95.222	ENSJJAG00000003188	Exosc2	100	95.222	Jaculus_jaculus
ENSSBOG00000022712	EXOSC2	99	77.055	ENSKMAG00000017397	exosc2	99	77.055	Kryptolebias_marmoratus
ENSSBOG00000022712	EXOSC2	100	76.451	ENSLBEG00000019269	exosc2	100	76.451	Labrus_bergylta
ENSSBOG00000022712	EXOSC2	100	82.993	ENSLACG00000015530	EXOSC2	100	82.993	Latimeria_chalumnae
ENSSBOG00000022712	EXOSC2	100	96.939	ENSLAFG00000006984	EXOSC2	100	96.939	Loxodonta_africana
ENSSBOG00000022712	EXOSC2	100	84.983	ENSMFAG00000034160	-	84	84.983	Macaca_fascicularis
ENSSBOG00000022712	EXOSC2	100	98.294	ENSMFAG00000000597	-	100	98.294	Macaca_fascicularis
ENSSBOG00000022712	EXOSC2	100	97.753	ENSMMUG00000012498	EXOSC2	100	97.753	Macaca_mulatta
ENSSBOG00000022712	EXOSC2	100	98.294	ENSMNEG00000031861	-	100	98.294	Macaca_nemestrina
ENSSBOG00000022712	EXOSC2	100	86.007	ENSMNEG00000028704	-	91	86.007	Macaca_nemestrina
ENSSBOG00000022712	EXOSC2	100	84.983	ENSMLEG00000029891	-	91	84.983	Mandrillus_leucophaeus
ENSSBOG00000022712	EXOSC2	100	98.294	ENSMLEG00000042587	-	100	98.294	Mandrillus_leucophaeus
ENSSBOG00000022712	EXOSC2	100	77.474	ENSMAMG00000012466	exosc2	100	77.474	Mastacembelus_armatus
ENSSBOG00000022712	EXOSC2	100	76.109	ENSMZEG00005018737	exosc2	100	76.109	Maylandia_zebra
ENSSBOG00000022712	EXOSC2	99	85.616	ENSMGAG00000005450	EXOSC2	99	85.616	Meleagris_gallopavo
ENSSBOG00000022712	EXOSC2	100	95.222	ENSMAUG00000008299	Exosc2	100	95.222	Mesocricetus_auratus
ENSSBOG00000022712	EXOSC2	100	97.611	ENSMICG00000015495	EXOSC2	100	97.611	Microcebus_murinus
ENSSBOG00000022712	EXOSC2	100	94.539	ENSMOCG00000008262	Exosc2	100	94.539	Microtus_ochrogaster
ENSSBOG00000022712	EXOSC2	100	77.816	ENSMMOG00000009616	exosc2	100	77.816	Mola_mola
ENSSBOG00000022712	EXOSC2	100	92.491	ENSMODG00000012114	EXOSC2	100	92.491	Monodelphis_domestica
ENSSBOG00000022712	EXOSC2	100	77.133	ENSMALG00000022132	exosc2	100	77.133	Monopterus_albus
ENSSBOG00000022712	EXOSC2	100	93.515	MGP_CAROLIEiJ_G0023415	Exosc2	100	93.522	Mus_caroli
ENSSBOG00000022712	EXOSC2	100	93.515	ENSMUSG00000039356	Exosc2	100	93.522	Mus_musculus
ENSSBOG00000022712	EXOSC2	100	93.857	MGP_PahariEiJ_G0024872	Exosc2	100	93.927	Mus_pahari
ENSSBOG00000022712	EXOSC2	100	93.515	MGP_SPRETEiJ_G0024332	Exosc2	100	93.522	Mus_spretus
ENSSBOG00000022712	EXOSC2	100	96.246	ENSMPUG00000012686	EXOSC2	100	96.246	Mustela_putorius_furo
ENSSBOG00000022712	EXOSC2	100	97.288	ENSMLUG00000008776	EXOSC2	100	97.288	Myotis_lucifugus
ENSSBOG00000022712	EXOSC2	100	95.563	ENSNGAG00000019383	Exosc2	100	95.563	Nannospalax_galili
ENSSBOG00000022712	EXOSC2	100	76.792	ENSNBRG00000005453	exosc2	100	76.792	Neolamprologus_brichardi
ENSSBOG00000022712	EXOSC2	100	98.976	ENSNLEG00000012533	EXOSC2	100	98.976	Nomascus_leucogenys
ENSSBOG00000022712	EXOSC2	100	72.014	ENSMEUG00000000795	EXOSC2	100	72.014	Notamacropus_eugenii
ENSSBOG00000022712	EXOSC2	65	96.364	ENSOPRG00000008688	EXOSC2	65	96.364	Ochotona_princeps
ENSSBOG00000022712	EXOSC2	87	93.701	ENSODEG00000019513	-	100	93.701	Octodon_degus
ENSSBOG00000022712	EXOSC2	100	92.833	ENSODEG00000016880	-	100	92.833	Octodon_degus
ENSSBOG00000022712	EXOSC2	100	76.792	ENSONIG00000014086	exosc2	100	76.792	Oreochromis_niloticus
ENSSBOG00000022712	EXOSC2	100	84.300	ENSOANG00000001044	EXOSC2	100	84.300	Ornithorhynchus_anatinus
ENSSBOG00000022712	EXOSC2	100	94.881	ENSOCUG00000007138	EXOSC2	100	94.881	Oryctolagus_cuniculus
ENSSBOG00000022712	EXOSC2	100	77.133	ENSORLG00000007443	exosc2	100	77.133	Oryzias_latipes
ENSSBOG00000022712	EXOSC2	100	76.792	ENSORLG00020018902	exosc2	100	76.792	Oryzias_latipes_hni
ENSSBOG00000022712	EXOSC2	100	77.133	ENSORLG00015006767	exosc2	100	77.133	Oryzias_latipes_hsok
ENSSBOG00000022712	EXOSC2	100	76.109	ENSOMEG00000003533	exosc2	100	76.109	Oryzias_melastigma
ENSSBOG00000022712	EXOSC2	100	96.928	ENSOGAG00000007558	EXOSC2	100	96.928	Otolemur_garnettii
ENSSBOG00000022712	EXOSC2	100	95.593	ENSOARG00000007438	EXOSC2	100	95.593	Ovis_aries
ENSSBOG00000022712	EXOSC2	100	98.976	ENSPPAG00000034796	EXOSC2	100	98.976	Pan_paniscus
ENSSBOG00000022712	EXOSC2	100	96.587	ENSPPRG00000001089	EXOSC2	100	96.587	Panthera_pardus
ENSSBOG00000022712	EXOSC2	100	96.587	ENSPTIG00000021163	EXOSC2	100	96.587	Panthera_tigris_altaica
ENSSBOG00000022712	EXOSC2	100	98.976	ENSPTRG00000021476	EXOSC2	100	98.976	Pan_troglodytes
ENSSBOG00000022712	EXOSC2	100	98.976	ENSPTRG00000045766	-	100	98.976	Pan_troglodytes
ENSSBOG00000022712	EXOSC2	100	98.294	ENSPANG00000025966	EXOSC2	100	98.294	Papio_anubis
ENSSBOG00000022712	EXOSC2	99	79.931	ENSPKIG00000004271	exosc2	98	79.931	Paramormyrops_kingsleyae
ENSSBOG00000022712	EXOSC2	99	87.671	ENSPSIG00000006743	EXOSC2	99	87.671	Pelodiscus_sinensis
ENSSBOG00000022712	EXOSC2	86	79.051	ENSPMGG00000010980	exosc2	99	79.051	Periophthalmus_magnuspinnatus
ENSSBOG00000022712	EXOSC2	100	94.881	ENSPEMG00000006345	Exosc2	100	94.881	Peromyscus_maniculatus_bairdii
ENSSBOG00000022712	EXOSC2	100	75.932	ENSPMAG00000001280	exosc2	100	75.932	Petromyzon_marinus
ENSSBOG00000022712	EXOSC2	100	92.833	ENSPCIG00000024122	EXOSC2	97	92.833	Phascolarctos_cinereus
ENSSBOG00000022712	EXOSC2	99	76.109	ENSPFOG00000019819	exosc2	99	76.109	Poecilia_formosa
ENSSBOG00000022712	EXOSC2	99	76.370	ENSPLAG00000004605	exosc2	99	76.370	Poecilia_latipinna
ENSSBOG00000022712	EXOSC2	99	76.370	ENSPMEG00000010976	exosc2	99	76.370	Poecilia_mexicana
ENSSBOG00000022712	EXOSC2	99	76.027	ENSPREG00000014306	exosc2	99	76.027	Poecilia_reticulata
ENSSBOG00000022712	EXOSC2	100	98.635	ENSPPYG00000019695	EXOSC2	100	98.635	Pongo_abelii
ENSSBOG00000022712	EXOSC2	100	96.587	ENSPCAG00000013400	EXOSC2	100	96.587	Procavia_capensis
ENSSBOG00000022712	EXOSC2	100	96.928	ENSPCOG00000017639	EXOSC2	100	96.928	Propithecus_coquereli
ENSSBOG00000022712	EXOSC2	100	95.563	ENSPVAG00000001513	EXOSC2	100	95.563	Pteropus_vampyrus
ENSSBOG00000022712	EXOSC2	100	77.133	ENSPNYG00000007383	exosc2	100	77.133	Pundamilia_nyererei
ENSSBOG00000022712	EXOSC2	100	79.932	ENSPNAG00000014281	exosc2	100	79.932	Pygocentrus_nattereri
ENSSBOG00000022712	EXOSC2	100	94.539	ENSRNOG00000009245	Exosc2	100	94.539	Rattus_norvegicus
ENSSBOG00000022712	EXOSC2	100	98.294	ENSRBIG00000031203	-	100	98.294	Rhinopithecus_bieti
ENSSBOG00000022712	EXOSC2	99	91.781	ENSRBIG00000029791	-	99	91.781	Rhinopithecus_bieti
ENSSBOG00000022712	EXOSC2	100	98.294	ENSRROG00000010827	-	100	98.294	Rhinopithecus_roxellana
ENSSBOG00000022712	EXOSC2	99	90.068	ENSRROG00000043609	-	99	90.068	Rhinopithecus_roxellana
ENSSBOG00000022712	EXOSC2	89	41.216	YHR069C	-	82	41.216	Saccharomyces_cerevisiae
ENSSBOG00000022712	EXOSC2	100	91.809	ENSSHAG00000016050	EXOSC2	100	91.809	Sarcophilus_harrisii
ENSSBOG00000022712	EXOSC2	100	78.498	ENSSFOG00015011245	exosc2	100	78.498	Scleropages_formosus
ENSSBOG00000022712	EXOSC2	100	76.451	ENSSMAG00000003112	exosc2	100	76.451	Scophthalmus_maximus
ENSSBOG00000022712	EXOSC2	100	76.351	ENSSDUG00000004634	exosc2	100	76.351	Seriola_dumerili
ENSSBOG00000022712	EXOSC2	100	77.133	ENSSLDG00000010616	exosc2	100	77.133	Seriola_lalandi_dorsalis
ENSSBOG00000022712	EXOSC2	99	87.119	ENSSPUG00000013391	EXOSC2	99	87.119	Sphenodon_punctatus
ENSSBOG00000022712	EXOSC2	100	77.133	ENSSPAG00000022947	exosc2	100	77.133	Stegastes_partitus
ENSSBOG00000022712	EXOSC2	100	97.611	ENSSSCG00000005704	EXOSC2	100	97.611	Sus_scrofa
ENSSBOG00000022712	EXOSC2	99	82.877	ENSTGUG00000004697	EXOSC2	99	82.877	Taeniopygia_guttata
ENSSBOG00000022712	EXOSC2	100	73.038	ENSTRUG00000022436	exosc2	100	73.038	Takifugu_rubripes
ENSSBOG00000022712	EXOSC2	100	89.761	ENSTTRG00000015159	EXOSC2	100	89.761	Tursiops_truncatus
ENSSBOG00000022712	EXOSC2	95	93.863	ENSUAMG00000009651	EXOSC2	99	93.863	Ursus_americanus
ENSSBOG00000022712	EXOSC2	100	96.587	ENSUMAG00000018726	EXOSC2	100	96.587	Ursus_maritimus
ENSSBOG00000022712	EXOSC2	100	96.246	ENSVVUG00000027665	EXOSC2	100	96.246	Vulpes_vulpes
ENSSBOG00000022712	EXOSC2	100	78.840	ENSXETG00000001340	exosc2	100	78.840	Xenopus_tropicalis
ENSSBOG00000022712	EXOSC2	99	76.370	ENSXMAG00000005265	exosc2	99	76.370	Xiphophorus_maculatus