EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000023340 (Gene tree)
Gene ID: 101051832
Gene Symbol: POLR2F
Alias: HRBP14.4|RPB6
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 83362 bases
Position: chrJH378157.1:11355175-11438536
Accession: 9193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000013151	RNA_pol_Rpb6	PF01192.22	1.7e-15	1	1
ENSSBOP00000013145	RNA_pol_Rpb6	PF01192.22	1.9e-15	1	1
ENSSBOP00000013134	RNA_pol_Rpb6	PF01192.22	5.7e-13	1	1
ENSSBOP00000013127	RNA_pol_Rpb6	PF01192.22	8.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000029953	POLR2F-205	222	-	ENSSBOP00000013159	73 (aa)	-	A0A2K6T0J4
ENSSBOT00000029921	POLR2F-201	444	-	ENSSBOP00000013127	147 (aa)	-	A0A2K6T0E3
ENSSBOT00000029959	POLR2F-206	228	-	ENSSBOP00000013165	75 (aa)	-	A0A2K6T0I5
ENSSBOT00000029939	POLR2F-203	599	XM_003932876	ENSSBOP00000013145	127 (aa)	XP_003932925	A0A2K6T0G2
ENSSBOT00000029928	POLR2F-202	378	-	ENSSBOP00000013134	125 (aa)	-	A0A2K6T0G6
ENSSBOT00000029945	POLR2F-204	369	-	ENSSBOP00000013151	122 (aa)	-	A0A2K6T0L9

Gene Model

Click here to download ENSSBOG00000023340's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03020	RNA polymerase	KEGG
sbq04623	Cytosolic DNA-sensing pathway	KEGG
sbq05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000023340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000023340	POLR2F	100	100.000	ENSG00000100142	POLR2F	100	100.000	Homo_sapiens
ENSSBOG00000023340	POLR2F	100	88.976	ENSAPOG00000002902	polr2f	100	88.976	Acanthochromis_polyacanthus
ENSSBOG00000023340	POLR2F	100	99.213	ENSAMEG00000010331	POLR2F	100	99.213	Ailuropoda_melanoleuca
ENSSBOG00000023340	POLR2F	100	88.976	ENSACIG00000000923	polr2f	100	88.976	Amphilophus_citrinellus
ENSSBOG00000023340	POLR2F	100	89.764	ENSAOCG00000003182	polr2f	100	89.764	Amphiprion_ocellaris
ENSSBOG00000023340	POLR2F	100	89.764	ENSAPEG00000012999	polr2f	100	89.764	Amphiprion_percula
ENSSBOG00000023340	POLR2F	100	88.976	ENSATEG00000008929	polr2f	100	88.976	Anabas_testudineus
ENSSBOG00000023340	POLR2F	98	97.500	ENSAPLG00000015235	POLR2F	96	97.500	Anas_platyrhynchos
ENSSBOG00000023340	POLR2F	100	99.213	ENSACAG00000015288	POLR2F	100	99.213	Anolis_carolinensis
ENSSBOG00000023340	POLR2F	100	100.000	ENSANAG00000020840	POLR2F	100	100.000	Aotus_nancymaae
ENSSBOG00000023340	POLR2F	100	89.764	ENSACLG00000016129	polr2f	100	89.764	Astatotilapia_calliptera
ENSSBOG00000023340	POLR2F	100	89.764	ENSAMXG00000012812	polr2f	100	89.764	Astyanax_mexicanus
ENSSBOG00000023340	POLR2F	100	100.000	ENSBTAG00000004820	POLR2F	100	100.000	Bos_taurus
ENSSBOG00000023340	POLR2F	66	77.500	WBGene00007355	rpb-6	68	70.213	Caenorhabditis_elegans
ENSSBOG00000023340	POLR2F	100	100.000	ENSCJAG00000048241	POLR2F	100	100.000	Callithrix_jacchus
ENSSBOG00000023340	POLR2F	100	99.213	ENSCAFG00000001437	POLR2F	100	99.213	Canis_familiaris
ENSSBOG00000023340	POLR2F	100	99.180	ENSCHIG00000012907	POLR2F	96	99.180	Capra_hircus
ENSSBOG00000023340	POLR2F	100	99.213	ENSTSYG00000008187	POLR2F	100	99.213	Carlito_syrichta
ENSSBOG00000023340	POLR2F	98	100.000	ENSCAPG00000013419	POLR2F	94	100.000	Cavia_aperea
ENSSBOG00000023340	POLR2F	100	100.000	ENSCPOG00000034094	POLR2F	100	100.000	Cavia_porcellus
ENSSBOG00000023340	POLR2F	100	100.000	ENSCCAG00000036489	POLR2F	100	100.000	Cebus_capucinus
ENSSBOG00000023340	POLR2F	100	100.000	ENSCATG00000041014	POLR2F	100	100.000	Cercocebus_atys
ENSSBOG00000023340	POLR2F	100	100.000	ENSCLAG00000017167	POLR2F	100	100.000	Chinchilla_lanigera
ENSSBOG00000023340	POLR2F	100	100.000	ENSCSAG00000006862	POLR2F	100	100.000	Chlorocebus_sabaeus
ENSSBOG00000023340	POLR2F	99	98.347	ENSCPBG00000023030	POLR2F	62	98.347	Chrysemys_picta_bellii
ENSSBOG00000023340	POLR2F	84	75.000	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
ENSSBOG00000023340	POLR2F	100	100.000	ENSCANG00000041884	POLR2F	100	100.000	Colobus_angolensis_palliatus
ENSSBOG00000023340	POLR2F	100	100.000	ENSCGRG00001023541	POLR2F	100	100.000	Cricetulus_griseus_chok1gshd
ENSSBOG00000023340	POLR2F	100	100.000	ENSCGRG00000011921	POLR2F	100	100.000	Cricetulus_griseus_crigri
ENSSBOG00000023340	POLR2F	87	90.566	ENSCSEG00000006848	polr2f	83	90.566	Cynoglossus_semilaevis
ENSSBOG00000023340	POLR2F	100	88.189	ENSCVAG00000010437	polr2f	100	88.189	Cyprinodon_variegatus
ENSSBOG00000023340	POLR2F	100	87.402	ENSDARG00000036625	polr2f	100	87.402	Danio_rerio
ENSSBOG00000023340	POLR2F	100	100.000	ENSDNOG00000005884	POLR2F	100	100.000	Dasypus_novemcinctus
ENSSBOG00000023340	POLR2F	100	100.000	ENSDORG00000024789	Polr2f	100	100.000	Dipodomys_ordii
ENSSBOG00000023340	POLR2F	83	72.115	FBgn0003275	RpII18	79	72.115	Drosophila_melanogaster
ENSSBOG00000023340	POLR2F	75	71.429	ENSEBUG00000002842	-	90	64.078	Eptatretus_burgeri
ENSSBOG00000023340	POLR2F	58	77.465	ENSEBUG00000008509	polr2f	71	81.159	Eptatretus_burgeri
ENSSBOG00000023340	POLR2F	75	97.826	ENSEASG00005018802	-	87	97.938	Equus_asinus_asinus
ENSSBOG00000023340	POLR2F	100	97.638	ENSEEUG00000011014	POLR2F	100	97.638	Erinaceus_europaeus
ENSSBOG00000023340	POLR2F	100	87.402	ENSELUG00000000319	polr2f	100	87.402	Esox_lucius
ENSSBOG00000023340	POLR2F	100	99.213	ENSFCAG00000002806	POLR2F	100	99.213	Felis_catus
ENSSBOG00000023340	POLR2F	100	100.000	ENSFDAG00000009926	POLR2F	100	100.000	Fukomys_damarensis
ENSSBOG00000023340	POLR2F	92	88.393	ENSFHEG00000005448	polr2f	84	88.679	Fundulus_heteroclitus
ENSSBOG00000023340	POLR2F	100	83.465	ENSGMOG00000009967	polr2f	100	83.465	Gadus_morhua
ENSSBOG00000023340	POLR2F	100	97.638	ENSGALG00000012291	POLR2F	100	97.638	Gallus_gallus
ENSSBOG00000023340	POLR2F	100	87.402	ENSGAFG00000017573	polr2f	100	87.402	Gambusia_affinis
ENSSBOG00000023340	POLR2F	100	85.039	ENSGACG00000007322	polr2f	100	85.039	Gasterosteus_aculeatus
ENSSBOG00000023340	POLR2F	100	99.213	ENSGAGG00000021757	POLR2F	100	99.213	Gopherus_agassizii
ENSSBOG00000023340	POLR2F	100	100.000	ENSGGOG00000005213	POLR2F	100	100.000	Gorilla_gorilla
ENSSBOG00000023340	POLR2F	100	89.764	ENSHBUG00000022089	polr2f	100	89.764	Haplochromis_burtoni
ENSSBOG00000023340	POLR2F	100	100.000	ENSHGLG00000018942	POLR2F	100	100.000	Heterocephalus_glaber_female
ENSSBOG00000023340	POLR2F	100	100.000	ENSHGLG00100012851	POLR2F	100	100.000	Heterocephalus_glaber_male
ENSSBOG00000023340	POLR2F	100	86.614	ENSHCOG00000006149	polr2f	100	86.614	Hippocampus_comes
ENSSBOG00000023340	POLR2F	80	91.753	ENSIPUG00000000814	polr2f	100	91.753	Ictalurus_punctatus
ENSSBOG00000023340	POLR2F	100	100.000	ENSSTOG00000025722	POLR2F	100	100.000	Ictidomys_tridecemlineatus
ENSSBOG00000023340	POLR2F	100	100.000	ENSJJAG00000008097	Polr2f	100	100.000	Jaculus_jaculus
ENSSBOG00000023340	POLR2F	100	90.551	ENSKMAG00000014230	polr2f	100	90.551	Kryptolebias_marmoratus
ENSSBOG00000023340	POLR2F	87	89.623	ENSLBEG00000008383	polr2f	88	89.623	Labrus_bergylta
ENSSBOG00000023340	POLR2F	100	94.488	ENSLACG00000003931	POLR2F	100	94.488	Latimeria_chalumnae
ENSSBOG00000023340	POLR2F	100	88.462	ENSLOCG00000011827	polr2f	100	88.462	Lepisosteus_oculatus
ENSSBOG00000023340	POLR2F	100	100.000	ENSLAFG00000012632	POLR2F	100	100.000	Loxodonta_africana
ENSSBOG00000023340	POLR2F	100	100.000	ENSMFAG00000033687	POLR2F	100	100.000	Macaca_fascicularis
ENSSBOG00000023340	POLR2F	100	99.180	ENSMMUG00000038231	POLR2F	100	99.180	Macaca_mulatta
ENSSBOG00000023340	POLR2F	100	100.000	ENSMNEG00000044365	POLR2F	100	100.000	Macaca_nemestrina
ENSSBOG00000023340	POLR2F	100	100.000	ENSMLEG00000033077	POLR2F	100	100.000	Mandrillus_leucophaeus
ENSSBOG00000023340	POLR2F	100	89.764	ENSMAMG00000008056	polr2f	100	89.764	Mastacembelus_armatus
ENSSBOG00000023340	POLR2F	100	89.764	ENSMZEG00005005705	polr2f	100	89.764	Maylandia_zebra
ENSSBOG00000023340	POLR2F	100	97.638	ENSMGAG00000012504	POLR2F	100	97.638	Meleagris_gallopavo
ENSSBOG00000023340	POLR2F	100	100.000	ENSMAUG00000018586	Polr2f	100	100.000	Mesocricetus_auratus
ENSSBOG00000023340	POLR2F	100	100.000	ENSMICG00000013128	POLR2F	100	100.000	Microcebus_murinus
ENSSBOG00000023340	POLR2F	100	100.000	ENSMOCG00000000237	Polr2f	100	100.000	Microtus_ochrogaster
ENSSBOG00000023340	POLR2F	100	89.764	ENSMMOG00000005106	polr2f	100	89.764	Mola_mola
ENSSBOG00000023340	POLR2F	100	97.638	ENSMODG00000019063	POLR2F	100	97.638	Monodelphis_domestica
ENSSBOG00000023340	POLR2F	100	88.976	ENSMALG00000001444	polr2f	100	88.976	Monopterus_albus
ENSSBOG00000023340	POLR2F	100	99.213	MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	Mus_caroli
ENSSBOG00000023340	POLR2F	100	99.213	ENSMUSG00000033020	Polr2f	100	100.000	Mus_musculus
ENSSBOG00000023340	POLR2F	100	99.213	MGP_PahariEiJ_G0020008	Polr2f	100	99.213	Mus_pahari
ENSSBOG00000023340	POLR2F	100	99.213	MGP_SPRETEiJ_G0020904	Polr2f	100	99.213	Mus_spretus
ENSSBOG00000023340	POLR2F	100	99.213	ENSMPUG00000012997	POLR2F	100	99.213	Mustela_putorius_furo
ENSSBOG00000023340	POLR2F	98	92.742	ENSMLUG00000029612	-	98	92.742	Myotis_lucifugus
ENSSBOG00000023340	POLR2F	100	97.674	ENSMLUG00000014315	-	100	97.674	Myotis_lucifugus
ENSSBOG00000023340	POLR2F	100	100.000	ENSNGAG00000020682	Polr2f	100	100.000	Nannospalax_galili
ENSSBOG00000023340	POLR2F	100	88.976	ENSNBRG00000002492	polr2f	100	88.976	Neolamprologus_brichardi
ENSSBOG00000023340	POLR2F	100	100.000	ENSNLEG00000014987	-	100	100.000	Nomascus_leucogenys
ENSSBOG00000023340	POLR2F	100	100.000	ENSODEG00000014123	POLR2F	100	100.000	Octodon_degus
ENSSBOG00000023340	POLR2F	100	88.976	ENSONIG00000008394	polr2f	100	88.976	Oreochromis_niloticus
ENSSBOG00000023340	POLR2F	100	99.213	ENSOANG00000014684	POLR2F	100	99.213	Ornithorhynchus_anatinus
ENSSBOG00000023340	POLR2F	100	100.000	ENSOCUG00000012064	POLR2F	100	100.000	Oryctolagus_cuniculus
ENSSBOG00000023340	POLR2F	100	87.402	ENSORLG00000014580	polr2f	100	87.402	Oryzias_latipes
ENSSBOG00000023340	POLR2F	100	88.189	ENSORLG00020006910	polr2f	100	88.189	Oryzias_latipes_hni
ENSSBOG00000023340	POLR2F	94	82.500	ENSORLG00015015332	polr2f	77	85.965	Oryzias_latipes_hsok
ENSSBOG00000023340	POLR2F	95	73.554	ENSOMEG00000006530	polr2f	72	73.554	Oryzias_melastigma
ENSSBOG00000023340	POLR2F	100	100.000	ENSOGAG00000025463	POLR2F	100	100.000	Otolemur_garnettii
ENSSBOG00000023340	POLR2F	100	100.000	ENSOARG00000014692	POLR2F	100	100.000	Ovis_aries
ENSSBOG00000023340	POLR2F	100	100.000	ENSPPAG00000024276	POLR2F	100	100.000	Pan_paniscus
ENSSBOG00000023340	POLR2F	100	99.213	ENSPPRG00000013030	POLR2F	100	99.213	Panthera_pardus
ENSSBOG00000023340	POLR2F	100	95.082	ENSPTIG00000000632	POLR2F	99	96.694	Panthera_tigris_altaica
ENSSBOG00000023340	POLR2F	100	100.000	ENSPTRG00000014356	POLR2F	100	100.000	Pan_troglodytes
ENSSBOG00000023340	POLR2F	100	100.000	ENSPANG00000023979	POLR2F	100	100.000	Papio_anubis
ENSSBOG00000023340	POLR2F	100	89.764	ENSPKIG00000002464	polr2f	100	89.764	Paramormyrops_kingsleyae
ENSSBOG00000023340	POLR2F	58	100.000	ENSPSIG00000013913	POLR2F	100	100.000	Pelodiscus_sinensis
ENSSBOG00000023340	POLR2F	100	89.764	ENSPMGG00000009619	polr2f	100	89.764	Periophthalmus_magnuspinnatus
ENSSBOG00000023340	POLR2F	100	100.000	ENSPEMG00000008322	Polr2f	100	100.000	Peromyscus_maniculatus_bairdii
ENSSBOG00000023340	POLR2F	100	97.638	ENSPCIG00000012000	-	100	97.638	Phascolarctos_cinereus
ENSSBOG00000023340	POLR2F	100	88.189	ENSPFOG00000000139	polr2f	100	88.189	Poecilia_formosa
ENSSBOG00000023340	POLR2F	100	88.189	ENSPLAG00000000988	polr2f	100	88.189	Poecilia_latipinna
ENSSBOG00000023340	POLR2F	100	88.189	ENSPMEG00000019063	polr2f	100	88.189	Poecilia_mexicana
ENSSBOG00000023340	POLR2F	78	87.755	ENSPREG00000016749	polr2f	100	87.755	Poecilia_reticulata
ENSSBOG00000023340	POLR2F	100	100.000	ENSPPYG00000011809	POLR2F	100	100.000	Pongo_abelii
ENSSBOG00000023340	POLR2F	100	100.000	ENSPCOG00000025716	POLR2F	100	100.000	Propithecus_coquereli
ENSSBOG00000023340	POLR2F	78	100.000	ENSPVAG00000010107	POLR2F	90	75.352	Pteropus_vampyrus
ENSSBOG00000023340	POLR2F	100	89.764	ENSPNYG00000019790	polr2f	100	89.764	Pundamilia_nyererei
ENSSBOG00000023340	POLR2F	100	90.551	ENSPNAG00000009017	polr2f	100	90.551	Pygocentrus_nattereri
ENSSBOG00000023340	POLR2F	100	99.213	ENSRNOG00000011214	Polr2f	100	99.213	Rattus_norvegicus
ENSSBOG00000023340	POLR2F	100	100.000	ENSRBIG00000044878	POLR2F	100	100.000	Rhinopithecus_bieti
ENSSBOG00000023340	POLR2F	100	100.000	ENSRROG00000019586	POLR2F	100	100.000	Rhinopithecus_roxellana
ENSSBOG00000023340	POLR2F	100	97.638	ENSSHAG00000008502	POLR2F	100	97.638	Sarcophilus_harrisii
ENSSBOG00000023340	POLR2F	100	90.551	ENSSFOG00015012810	polr2f	100	90.551	Scleropages_formosus
ENSSBOG00000023340	POLR2F	100	88.976	ENSSMAG00000005354	polr2f	100	88.976	Scophthalmus_maximus
ENSSBOG00000023340	POLR2F	100	89.764	ENSSDUG00000016273	polr2f	100	89.764	Seriola_dumerili
ENSSBOG00000023340	POLR2F	100	89.764	ENSSLDG00000024895	polr2f	100	89.764	Seriola_lalandi_dorsalis
ENSSBOG00000023340	POLR2F	100	99.213	ENSSPUG00000011343	POLR2F	100	99.213	Sphenodon_punctatus
ENSSBOG00000023340	POLR2F	100	89.764	ENSSPAG00000019646	polr2f	100	89.764	Stegastes_partitus
ENSSBOG00000023340	POLR2F	100	99.213	ENSSSCG00000000116	POLR2F	100	99.213	Sus_scrofa
ENSSBOG00000023340	POLR2F	72	97.727	ENSTGUG00000016504	-	100	97.727	Taeniopygia_guttata
ENSSBOG00000023340	POLR2F	100	98.425	ENSTGUG00000010476	POLR2F	93	98.425	Taeniopygia_guttata
ENSSBOG00000023340	POLR2F	100	88.976	ENSTRUG00000021130	polr2f	71	88.976	Takifugu_rubripes
ENSSBOG00000023340	POLR2F	100	89.764	ENSTNIG00000010827	polr2f	100	89.764	Tetraodon_nigroviridis
ENSSBOG00000023340	POLR2F	78	100.000	ENSTTRG00000004817	POLR2F	90	74.126	Tursiops_truncatus
ENSSBOG00000023340	POLR2F	100	99.213	ENSUAMG00000020504	POLR2F	100	99.213	Ursus_americanus
ENSSBOG00000023340	POLR2F	100	99.213	ENSUMAG00000015052	POLR2F	100	99.213	Ursus_maritimus
ENSSBOG00000023340	POLR2F	99	99.174	ENSVVUG00000024021	POLR2F	92	99.174	Vulpes_vulpes
ENSSBOG00000023340	POLR2F	100	94.488	ENSXETG00000006346	polr2f	100	94.488	Xenopus_tropicalis
ENSSBOG00000023340	POLR2F	100	88.189	ENSXCOG00000015983	polr2f	100	88.189	Xiphophorus_couchianus
ENSSBOG00000023340	POLR2F	100	88.189	ENSXMAG00000001559	polr2f	100	88.189	Xiphophorus_maculatus