EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000023468 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 10531 bases
Position: chrJH378157.1:10517979-10528509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000013418	APOBEC_N	PF08210.11	1.8e-80	1	2
ENSSBOP00000013418	APOBEC_N	PF08210.11	1.8e-80	2	2
ENSSBOP00000013418	APOBEC_C	PF05240.14	3.6e-60	1	2
ENSSBOP00000013418	APOBEC_C	PF05240.14	3.6e-60	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000030212	-	1434	XM_010343449	ENSSBOP00000013418	477 (aa)	XP_010341751	A0A2K6T1C9

Gene Model

Click here to download ENSSBOG00000023468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000023468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000023468	-	78	77.027	ENSSBOG00000025673	-	99	77.027
ENSSBOG00000023468	-	80	90.526	ENSSBOG00000026566	-	99	90.526
ENSSBOG00000023468	-	77	68.817	ENSSBOG00000029091	-	90	68.817
ENSSBOG00000023468	-	81	82.990	ENSSBOG00000021384	-	100	82.990
ENSSBOG00000023468	-	79	45.361	ENSSBOG00000032780	-	100	46.448
ENSSBOG00000023468	-	74	37.306	ENSSBOG00000030005	APOBEC3H	98	37.306
ENSSBOG00000023468	-	78	82.692	ENSSBOG00000018208	-	99	82.692
ENSSBOG00000023468	-	57	41.892	ENSSBOG00000035758	AICDA	87	41.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000023468	-	80	70.419	ENSG00000239713	APOBEC3G	99	70.419	Homo_sapiens
ENSSBOG00000023468	-	77	50.515	ENSAMEG00000010815	-	92	48.837	Ailuropoda_melanoleuca
ENSSBOG00000023468	-	79	81.167	ENSANAG00000028416	-	99	81.167	Aotus_nancymaae
ENSSBOG00000023468	-	77	66.667	ENSANAG00000020573	-	93	66.667	Aotus_nancymaae
ENSSBOG00000023468	-	76	83.380	ENSANAG00000027961	-	99	83.380	Aotus_nancymaae
ENSSBOG00000023468	-	80	93.421	ENSANAG00000031271	APOBEC3G	99	93.421	Aotus_nancymaae
ENSSBOG00000023468	-	77	49.479	ENSBTAG00000037800	-	100	48.187	Bos_taurus
ENSSBOG00000023468	-	74	67.403	ENSCJAG00000011578	-	73	67.403	Callithrix_jacchus
ENSSBOG00000023468	-	80	89.211	ENSCJAG00000023368	APOBEC3G	99	89.211	Callithrix_jacchus
ENSSBOG00000023468	-	80	44.500	ENSCAFG00000015211	-	97	44.500	Canis_familiaris
ENSSBOG00000023468	-	57	51.079	ENSCAFG00000023589	-	98	51.079	Canis_familiaris
ENSSBOG00000023468	-	77	46.907	ENSCAFG00020002641	-	81	46.907	Canis_lupus_dingo
ENSSBOG00000023468	-	89	41.057	ENSCAFG00020002661	-	93	41.057	Canis_lupus_dingo
ENSSBOG00000023468	-	74	48.438	ENSCHIG00000012694	-	92	48.438	Capra_hircus
ENSSBOG00000023468	-	80	87.632	ENSCCAG00000032232	-	99	87.632	Cebus_capucinus
ENSSBOG00000023468	-	79	82.667	ENSCCAG00000032509	-	99	82.667	Cebus_capucinus
ENSSBOG00000023468	-	77	68.280	ENSCCAG00000030928	-	90	68.280	Cebus_capucinus
ENSSBOG00000023468	-	80	83.594	ENSCCAG00000033147	-	99	82.544	Cebus_capucinus
ENSSBOG00000023468	-	78	67.236	ENSCSAG00000006376	APOBEC3G	86	67.236	Chlorocebus_sabaeus
ENSSBOG00000023468	-	78	67.347	ENSCANG00000029968	-	75	67.347	Colobus_angolensis_palliatus
ENSSBOG00000023468	-	84	36.486	ENSDNOG00000039749	-	94	37.838	Dasypus_novemcinctus
ENSSBOG00000023468	-	80	50.000	ENSEASG00005018643	-	99	47.234	Equus_asinus_asinus
ENSSBOG00000023468	-	97	44.631	ENSECAG00000032756	-	100	44.631	Equus_caballus
ENSSBOG00000023468	-	82	49.282	ENSECAG00000022371	APOBEC3Z1B	89	49.282	Equus_caballus
ENSSBOG00000023468	-	80	69.169	ENSGGOG00000013750	APOBEC3G	99	69.169	Gorilla_gorilla
ENSSBOG00000023468	-	77	31.122	ENSHCOG00000007604	-	50	31.122	Hippocampus_comes
ENSSBOG00000023468	-	79	50.000	ENSLAFG00000008890	-	93	50.000	Loxodonta_africana
ENSSBOG00000023468	-	77	52.717	ENSLAFG00000005275	-	98	52.717	Loxodonta_africana
ENSSBOG00000023468	-	78	42.133	ENSLAFG00000020906	-	97	42.133	Loxodonta_africana
ENSSBOG00000023468	-	79	69.291	ENSMFAG00000044711	APOBEC3G	87	68.947	Macaca_fascicularis
ENSSBOG00000023468	-	80	67.792	ENSMMUG00000039346	APOBEC3G	98	67.792	Macaca_mulatta
ENSSBOG00000023468	-	79	69.211	ENSMNEG00000038847	APOBEC3G	96	68.947	Macaca_nemestrina
ENSSBOG00000023468	-	81	69.171	ENSMLEG00000024444	APOBEC3G	96	69.171	Mandrillus_leucophaeus
ENSSBOG00000023468	-	77	56.452	ENSMICG00000043748	-	92	56.452	Microcebus_murinus
ENSSBOG00000023468	-	77	53.804	ENSMICG00000047191	-	98	53.804	Microcebus_murinus
ENSSBOG00000023468	-	78	48.663	ENSMPUG00000013235	-	95	48.663	Mustela_putorius_furo
ENSSBOG00000023468	-	71	42.308	ENSMLUG00000000517	-	100	42.308	Myotis_lucifugus
ENSSBOG00000023468	-	73	40.206	ENSMLUG00000028652	-	88	39.604	Myotis_lucifugus
ENSSBOG00000023468	-	79	53.077	ENSMLUG00000008631	-	100	53.077	Myotis_lucifugus
ENSSBOG00000023468	-	78	41.645	ENSMLUG00000000977	-	97	41.645	Myotis_lucifugus
ENSSBOG00000023468	-	73	43.386	ENSMLUG00000014565	-	100	43.386	Myotis_lucifugus
ENSSBOG00000023468	-	75	41.618	ENSMLUG00000026771	-	97	41.618	Myotis_lucifugus
ENSSBOG00000023468	-	77	50.802	ENSMLUG00000023022	-	95	46.288	Myotis_lucifugus
ENSSBOG00000023468	-	67	40.303	ENSMLUG00000024853	-	100	40.303	Myotis_lucifugus
ENSSBOG00000023468	-	77	46.524	ENSMLUG00000024957	-	85	46.524	Myotis_lucifugus
ENSSBOG00000023468	-	78	58.457	ENSNLEG00000018922	-	100	58.457	Nomascus_leucogenys
ENSSBOG00000023468	-	77	51.892	ENSOPRG00000002326	-	99	51.892	Ochotona_princeps
ENSSBOG00000023468	-	73	45.366	ENSOCUG00000023532	-	85	44.091	Oryctolagus_cuniculus
ENSSBOG00000023468	-	77	62.366	ENSOGAG00000032518	-	97	62.366	Otolemur_garnettii
ENSSBOG00000023468	-	78	55.897	ENSOGAG00000024822	-	95	55.897	Otolemur_garnettii
ENSSBOG00000023468	-	74	46.114	ENSOARG00000016213	APOBEC3Z1	100	46.114	Ovis_aries
ENSSBOG00000023468	-	86	68.633	ENSPPAG00000033277	-	90	68.633	Pan_paniscus
ENSSBOG00000023468	-	81	70.207	ENSPTRG00000014387	APOBEC3G	100	70.207	Pan_troglodytes
ENSSBOG00000023468	-	81	67.098	ENSPPYG00000011833	APOBEC3G	96	67.098	Pongo_abelii
ENSSBOG00000023468	-	83	42.677	ENSPCAG00000015518	-	94	42.484	Procavia_capensis
ENSSBOG00000023468	-	55	52.800	ENSPCAG00000001848	-	97	52.800	Procavia_capensis
ENSSBOG00000023468	-	72	58.621	ENSPCOG00000016357	-	85	58.621	Propithecus_coquereli
ENSSBOG00000023468	-	88	49.789	ENSPVAG00000016865	-	57	48.239	Pteropus_vampyrus
ENSSBOG00000023468	-	77	51.337	ENSPVAG00000004045	-	94	51.337	Pteropus_vampyrus
ENSSBOG00000023468	-	78	69.969	ENSRBIG00000035436	APOBEC3G	92	68.944	Rhinopithecus_bieti
ENSSBOG00000023468	-	74	48.889	ENSTTRG00000009395	-	93	48.889	Tursiops_truncatus
ENSSBOG00000023468	-	75	49.246	ENSUMAG00000002249	-	91	49.246	Ursus_maritimus
ENSSBOG00000023468	-	73	50.515	ENSUMAG00000014447	-	94	50.515	Ursus_maritimus