EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000023754 (Gene tree)
Gene ID: 101028232
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 146900 bases
Position: chrJH378108.1:42453065-42599964
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000014721	ResIII	PF04851.15	3.6e-08	1	1
ENSSBOP00000014703	ResIII	PF04851.15	3.6e-08	1	1
ENSSBOP00000014688	ResIII	PF04851.15	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000031501	-	5427	-	ENSSBOP00000014703	1808 (aa)	-	A0A2K6T4Z2
ENSSBOT00000031534	-	1767	XM_010349438	ENSSBOP00000014736	588 (aa)	XP_010347740	A0A2K6T527
ENSSBOT00000031518	-	5379	-	ENSSBOP00000014721	1792 (aa)	-	A0A2K6T516
ENSSBOT00000031537	-	96	-	ENSSBOP00000014739	32 (aa)	-	A0A2K6T528
ENSSBOT00000031486	-	12299	XM_003921593	ENSSBOP00000014688	1827 (aa)	XP_003921642	A0A2K6T4X9

Gene Model

Click here to download ENSSBOG00000023754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000023754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000023754	-	60	32.487	ENSSBOG00000022089	CHD6	84	39.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000023754	-	100	99.453	ENSG00000173575	CHD2	100	99.453	Homo_sapiens
ENSSBOG00000023754	-	96	72.732	ENSAPOG00000008913	chd2	100	71.805	Acanthochromis_polyacanthus
ENSSBOG00000023754	-	63	99.045	ENSAMEG00000010805	-	100	99.045	Ailuropoda_melanoleuca
ENSSBOG00000023754	-	96	70.235	ENSAOCG00000016332	chd2	100	69.338	Amphiprion_ocellaris
ENSSBOG00000023754	-	96	72.590	ENSAPEG00000016676	chd2	100	71.661	Amphiprion_percula
ENSSBOG00000023754	-	96	72.340	ENSATEG00000005246	chd2	100	71.551	Anabas_testudineus
ENSSBOG00000023754	-	100	88.152	ENSAPLG00000011141	-	100	88.207	Anas_platyrhynchos
ENSSBOG00000023754	-	98	80.782	ENSACAG00000000088	-	99	80.565	Anolis_carolinensis
ENSSBOG00000023754	-	100	99.836	ENSANAG00000024017	-	100	99.836	Aotus_nancymaae
ENSSBOG00000023754	-	100	99.617	ENSCJAG00000020444	-	100	99.617	Callithrix_jacchus
ENSSBOG00000023754	-	99	98.506	ENSCAFG00000010998	CHD2	100	98.550	Canis_familiaris
ENSSBOG00000023754	-	99	95.222	ENSCHIG00000022261	-	99	95.222	Capra_hircus
ENSSBOG00000023754	-	100	98.686	ENSTSYG00000003272	-	100	98.686	Carlito_syrichta
ENSSBOG00000023754	-	93	97.192	ENSCPOG00000005800	-	100	97.192	Cavia_porcellus
ENSSBOG00000023754	-	100	99.836	ENSCCAG00000035304	-	100	99.836	Cebus_capucinus
ENSSBOG00000023754	-	100	99.453	ENSCATG00000031069	-	100	99.453	Cercocebus_atys
ENSSBOG00000023754	-	100	97.648	ENSCLAG00000016269	-	100	97.648	Chinchilla_lanigera
ENSSBOG00000023754	-	100	99.508	ENSCSAG00000017007	-	100	99.508	Chlorocebus_sabaeus
ENSSBOG00000023754	-	78	100.000	ENSCHOG00000000608	-	82	100.000	Choloepus_hoffmanni
ENSSBOG00000023754	-	82	88.172	ENSCPBG00000018049	-	97	91.346	Chrysemys_picta_bellii
ENSSBOG00000023754	-	74	54.414	ENSCSAVG00000007580	-	93	60.314	Ciona_savignyi
ENSSBOG00000023754	-	100	99.398	ENSCANG00000038126	-	100	99.398	Colobus_angolensis_palliatus
ENSSBOG00000023754	-	100	97.537	ENSCGRG00001006649	Chd2	100	97.537	Cricetulus_griseus_chok1gshd
ENSSBOG00000023754	-	100	97.537	ENSCGRG00000018154	Chd2	100	97.537	Cricetulus_griseus_crigri
ENSSBOG00000023754	-	93	66.564	ENSCSEG00000003646	chd2	94	66.038	Cynoglossus_semilaevis
ENSSBOG00000023754	-	100	64.359	ENSCVAG00000002427	chd2	99	71.000	Cyprinodon_variegatus
ENSSBOG00000023754	-	96	70.241	ENSDARG00000060687	chd2	100	71.643	Danio_rerio
ENSSBOG00000023754	-	99	97.593	ENSDNOG00000009796	-	100	97.593	Dasypus_novemcinctus
ENSSBOG00000023754	-	50	75.824	ENSEBUG00000014994	chd2	83	75.824	Eptatretus_burgeri
ENSSBOG00000023754	-	99	98.451	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSSBOG00000023754	-	95	72.115	ENSELUG00000017981	chd2	100	70.746	Esox_lucius
ENSSBOG00000023754	-	100	89.391	ENSFALG00000010369	-	100	89.282	Ficedula_albicollis
ENSSBOG00000023754	-	100	97.538	ENSFDAG00000020651	-	100	97.538	Fukomys_damarensis
ENSSBOG00000023754	-	88	71.429	ENSFHEG00000002119	chd2	91	71.244	Fundulus_heteroclitus
ENSSBOG00000023754	-	94	68.977	ENSGMOG00000002890	chd2	99	70.381	Gadus_morhua
ENSSBOG00000023754	-	100	88.654	ENSGALG00000006949	CHD2	100	88.654	Gallus_gallus
ENSSBOG00000023754	-	96	70.316	ENSGAFG00000001905	chd2	97	69.553	Gambusia_affinis
ENSSBOG00000023754	-	91	70.916	ENSGACG00000013246	chd2	99	70.366	Gasterosteus_aculeatus
ENSSBOG00000023754	-	81	90.393	ENSGAGG00000013176	-	95	97.753	Gopherus_agassizii
ENSSBOG00000023754	-	100	98.031	ENSGGOG00000015677	CHD2	100	98.031	Gorilla_gorilla
ENSSBOG00000023754	-	96	72.656	ENSHBUG00000017947	chd2	100	71.529	Haplochromis_burtoni
ENSSBOG00000023754	-	100	97.265	ENSHGLG00000004435	CHD2	100	97.265	Heterocephalus_glaber_female
ENSSBOG00000023754	-	100	96.608	ENSHGLG00100016376	-	100	96.608	Heterocephalus_glaber_male
ENSSBOG00000023754	-	88	70.920	ENSHCOG00000008855	chd2	95	70.675	Hippocampus_comes
ENSSBOG00000023754	-	73	73.732	ENSIPUG00000000488	chd2	100	68.224	Ictalurus_punctatus
ENSSBOG00000023754	-	100	98.523	ENSSTOG00000001270	-	100	98.523	Ictidomys_tridecemlineatus
ENSSBOG00000023754	-	100	97.482	ENSJJAG00000000213	Chd2	100	97.482	Jaculus_jaculus
ENSSBOG00000023754	-	84	72.380	ENSKMAG00000015849	chd2	99	72.962	Kryptolebias_marmoratus
ENSSBOG00000023754	-	76	96.613	ENSLAFG00000016885	-	100	97.317	Loxodonta_africana
ENSSBOG00000023754	-	100	99.453	ENSMFAG00000033343	-	100	99.453	Macaca_fascicularis
ENSSBOG00000023754	-	100	99.453	ENSMMUG00000011782	-	100	99.453	Macaca_mulatta
ENSSBOG00000023754	-	100	99.071	ENSMNEG00000036875	-	100	99.071	Macaca_nemestrina
ENSSBOG00000023754	-	100	99.508	ENSMLEG00000035026	-	100	99.508	Mandrillus_leucophaeus
ENSSBOG00000023754	-	96	72.123	ENSMAMG00000009082	chd2	100	70.677	Mastacembelus_armatus
ENSSBOG00000023754	-	99	88.529	ENSMGAG00000008966	-	99	88.479	Meleagris_gallopavo
ENSSBOG00000023754	-	100	96.880	ENSMICG00000000332	-	100	96.880	Microcebus_murinus
ENSSBOG00000023754	-	100	97.155	ENSMOCG00000015124	Chd2	100	97.155	Microtus_ochrogaster
ENSSBOG00000023754	-	100	92.597	ENSMODG00000013158	-	100	92.760	Monodelphis_domestica
ENSSBOG00000023754	-	100	96.771	MGP_CAROLIEiJ_G0029860	Chd2	100	96.771	Mus_caroli
ENSSBOG00000023754	-	100	96.497	ENSMUSG00000078671	Chd2	100	96.497	Mus_musculus
ENSSBOG00000023754	-	100	96.718	MGP_PahariEiJ_G0013082	Chd2	100	96.718	Mus_pahari
ENSSBOG00000023754	-	100	96.606	MGP_SPRETEiJ_G0030962	Chd2	100	96.606	Mus_spretus
ENSSBOG00000023754	-	100	98.522	ENSMPUG00000017577	-	100	98.522	Mustela_putorius_furo
ENSSBOG00000023754	-	100	95.223	ENSMLUG00000009292	-	100	95.223	Myotis_lucifugus
ENSSBOG00000023754	-	100	98.194	ENSNGAG00000010792	Chd2	100	98.194	Nannospalax_galili
ENSSBOG00000023754	-	96	72.072	ENSNBRG00000020591	chd2	95	72.901	Neolamprologus_brichardi
ENSSBOG00000023754	-	100	96.991	ENSNLEG00000012349	-	100	96.991	Nomascus_leucogenys
ENSSBOG00000023754	-	71	89.552	ENSMEUG00000001522	-	76	90.909	Notamacropus_eugenii
ENSSBOG00000023754	-	100	96.663	ENSODEG00000016028	-	100	96.663	Octodon_degus
ENSSBOG00000023754	-	96	72.487	ENSONIG00000015136	chd2	100	71.959	Oreochromis_niloticus
ENSSBOG00000023754	-	88	83.395	ENSOANG00000004385	-	99	89.110	Ornithorhynchus_anatinus
ENSSBOG00000023754	-	100	86.681	ENSOCUG00000001628	-	99	97.670	Oryctolagus_cuniculus
ENSSBOG00000023754	-	96	72.119	ENSORLG00000008403	chd2	100	70.500	Oryzias_latipes
ENSSBOG00000023754	-	96	72.200	ENSORLG00020004138	chd2	100	70.683	Oryzias_latipes_hni
ENSSBOG00000023754	-	100	64.462	ENSOMEG00000005831	chd2	100	64.798	Oryzias_melastigma
ENSSBOG00000023754	-	100	96.335	ENSOGAG00000010399	-	100	96.335	Otolemur_garnettii
ENSSBOG00000023754	-	99	96.965	ENSOARG00000010343	-	100	95.569	Ovis_aries
ENSSBOG00000023754	-	100	98.416	ENSPPAG00000030381	-	100	98.416	Pan_paniscus
ENSSBOG00000023754	-	100	99.508	ENSPTRG00000007478	CHD2	100	99.508	Pan_troglodytes
ENSSBOG00000023754	-	100	96.554	ENSPANG00000033355	-	100	96.554	Papio_anubis
ENSSBOG00000023754	-	99	69.852	ENSPKIG00000000495	chd2	100	71.359	Paramormyrops_kingsleyae
ENSSBOG00000023754	-	84	70.147	ENSPMGG00000009941	chd2	99	70.705	Periophthalmus_magnuspinnatus
ENSSBOG00000023754	-	100	97.427	ENSPEMG00000019507	Chd2	100	97.427	Peromyscus_maniculatus_bairdii
ENSSBOG00000023754	-	91	93.413	ENSPCIG00000009417	-	100	92.452	Phascolarctos_cinereus
ENSSBOG00000023754	-	96	72.931	ENSPFOG00000007050	chd2	100	72.013	Poecilia_formosa
ENSSBOG00000023754	-	96	73.098	ENSPLAG00000005067	chd2	100	72.366	Poecilia_latipinna
ENSSBOG00000023754	-	96	72.987	ENSPMEG00000019628	chd2	100	72.067	Poecilia_mexicana
ENSSBOG00000023754	-	100	98.195	ENSPPYG00000006799	-	100	98.195	Pongo_abelii
ENSSBOG00000023754	-	100	98.742	ENSPCOG00000028084	-	100	98.742	Propithecus_coquereli
ENSSBOG00000023754	-	90	74.097	ENSPNYG00000010273	chd2	73	78.010	Pundamilia_nyererei
ENSSBOG00000023754	-	69	73.781	ENSPNAG00000016719	chd2	99	69.418	Pygocentrus_nattereri
ENSSBOG00000023754	-	100	96.606	ENSRNOG00000012716	Chd2	100	96.606	Rattus_norvegicus
ENSSBOG00000023754	-	100	97.321	ENSRBIG00000036875	-	100	97.321	Rhinopithecus_bieti
ENSSBOG00000023754	-	100	99.289	ENSRROG00000041087	-	100	99.289	Rhinopithecus_roxellana
ENSSBOG00000023754	-	100	92.760	ENSSHAG00000012513	-	100	92.978	Sarcophilus_harrisii
ENSSBOG00000023754	-	100	73.261	ENSSFOG00015023759	chd2	100	73.046	Scleropages_formosus
ENSSBOG00000023754	-	96	71.397	ENSSMAG00000001726	chd2	100	70.080	Scophthalmus_maximus
ENSSBOG00000023754	-	96	70.935	ENSSLDG00000001146	chd2	100	70.221	Seriola_lalandi_dorsalis
ENSSBOG00000023754	-	77	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSSBOG00000023754	-	99	84.022	ENSSPUG00000011266	-	99	84.441	Sphenodon_punctatus
ENSSBOG00000023754	-	100	98.632	ENSSSCG00000002266	-	100	98.632	Sus_scrofa
ENSSBOG00000023754	-	100	89.198	ENSTGUG00000008540	-	100	89.143	Taeniopygia_guttata
ENSSBOG00000023754	-	83	68.972	ENSTRUG00000008842	chd2	87	68.052	Takifugu_rubripes
ENSSBOG00000023754	-	88	72.409	ENSTNIG00000010760	chd2	98	72.036	Tetraodon_nigroviridis
ENSSBOG00000023754	-	71	96.916	ENSTBEG00000017730	-	83	96.916	Tupaia_belangeri
ENSSBOG00000023754	-	96	99.091	ENSTTRG00000000430	-	95	99.091	Tursiops_truncatus
ENSSBOG00000023754	-	100	95.840	ENSUMAG00000000083	-	100	95.348	Ursus_maritimus
ENSSBOG00000023754	-	86	98.182	ENSVPAG00000009645	-	86	98.195	Vicugna_pacos
ENSSBOG00000023754	-	86	80.284	ENSXETG00000024129	chd2	92	80.284	Xenopus_tropicalis
ENSSBOG00000023754	-	96	69.661	ENSXCOG00000020255	chd2	99	69.388	Xiphophorus_couchianus
ENSSBOG00000023754	-	96	72.987	ENSXMAG00000002707	chd2	100	72.028	Xiphophorus_maculatus