EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000023981 (Gene tree)
Gene ID: 101032323
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 103435 bases
Position: chrJH378151.1:4943672-5047106
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000014449	Ago_hook	PF10427.9	1.3e-20	1	1
ENSSBOP00000014476	Ago_hook	PF10427.9	1.9e-20	1	1
ENSSBOP00000014434	Ago_hook	PF10427.9	6.8e-20	1	1
ENSSBOP00000014439	Ago_hook	PF10427.9	6.8e-20	1	1
ENSSBOP00000014457	Ago_hook	PF10427.9	6.8e-20	1	1
ENSSBOP00000014492	Ago_hook	PF10427.9	1.7e-19	1	1
ENSSBOP00000014449	RRM_1	PF00076.22	0.00031	1	1
ENSSBOP00000014434	RRM_1	PF00076.22	0.00032	1	1
ENSSBOP00000014439	RRM_1	PF00076.22	0.00032	1	1
ENSSBOP00000014457	RRM_1	PF00076.22	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000031255	TNRC6C-204	8206	XM_010342364	ENSSBOP00000014457	1725 (aa)	XP_010340666	A0A2K6T472
ENSSBOT00000031290	TNRC6C-206	5760	-	ENSSBOP00000014492	1919 (aa)	-	A0A2K6T4B1
ENSSBOT00000031274	TNRC6C-205	5832	-	ENSSBOP00000014476	1943 (aa)	-	A0A2K6T4E0
ENSSBOT00000031237	TNRC6C-202	8352	-	ENSSBOP00000014439	1725 (aa)	-	A0A2K6T472
ENSSBOT00000031232	TNRC6C-201	8332	XM_010342363	ENSSBOP00000014434	1725 (aa)	XP_010340665	A0A2K6T472
ENSSBOT00000031247	TNRC6C-203	8184	XM_010342365	ENSSBOP00000014449	1669 (aa)	XP_010340667	A0A2K6T483

Gene Model

Click here to download ENSSBOG00000023981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000023981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000023981	TNRC6C	99	43.167	ENSSBOG00000036197	TNRC6A	99	42.998
ENSSBOG00000023981	TNRC6C	98	36.687	ENSSBOG00000029743	TNRC6B	92	54.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000023981	TNRC6C	100	97.891	ENSG00000078687	TNRC6C	100	97.895	Homo_sapiens
ENSSBOG00000023981	TNRC6C	80	52.863	ENSAPOG00000019749	tnrc6c1	98	49.262	Acanthochromis_polyacanthus
ENSSBOG00000023981	TNRC6C	100	88.673	ENSAMEG00000013756	TNRC6C	99	88.354	Ailuropoda_melanoleuca
ENSSBOG00000023981	TNRC6C	91	53.103	ENSACIG00000008075	tnrc6c1	98	54.130	Amphilophus_citrinellus
ENSSBOG00000023981	TNRC6C	78	64.804	ENSAOCG00000023968	tnrc6c1	99	48.954	Amphiprion_ocellaris
ENSSBOG00000023981	TNRC6C	80	53.893	ENSAPEG00000009020	tnrc6c1	99	48.935	Amphiprion_percula
ENSSBOG00000023981	TNRC6C	100	86.246	ENSAPLG00000005456	TNRC6C	100	85.854	Anas_platyrhynchos
ENSSBOG00000023981	TNRC6C	100	87.153	ENSACAG00000016198	TNRC6C	98	86.302	Anolis_carolinensis
ENSSBOG00000023981	TNRC6C	100	98.765	ENSANAG00000021554	TNRC6C	100	98.765	Aotus_nancymaae
ENSSBOG00000023981	TNRC6C	100	49.445	ENSACLG00000000424	tnrc6c1	99	48.687	Astatotilapia_calliptera
ENSSBOG00000023981	TNRC6C	97	90.503	ENSBTAG00000018658	TNRC6C	100	87.681	Bos_taurus
ENSSBOG00000023981	TNRC6C	100	98.456	ENSCJAG00000019431	TNRC6C	100	98.456	Callithrix_jacchus
ENSSBOG00000023981	TNRC6C	100	90.793	ENSCAFG00000005224	TNRC6C	99	90.323	Canis_familiaris
ENSSBOG00000023981	TNRC6C	100	90.432	ENSCAFG00020006661	TNRC6C	99	90.715	Canis_lupus_dingo
ENSSBOG00000023981	TNRC6C	100	87.196	ENSCHIG00000026004	TNRC6C	98	86.900	Capra_hircus
ENSSBOG00000023981	TNRC6C	100	95.420	ENSTSYG00000005403	TNRC6C	100	95.420	Carlito_syrichta
ENSSBOG00000023981	TNRC6C	99	83.473	ENSCAPG00000007307	TNRC6C	99	83.342	Cavia_aperea
ENSSBOG00000023981	TNRC6C	100	87.942	ENSCPOG00000000467	TNRC6C	100	87.957	Cavia_porcellus
ENSSBOG00000023981	TNRC6C	100	98.667	ENSCCAG00000030524	TNRC6C	100	98.667	Cebus_capucinus
ENSSBOG00000023981	TNRC6C	100	97.855	ENSCATG00000033135	TNRC6C	100	97.855	Cercocebus_atys
ENSSBOG00000023981	TNRC6C	100	90.435	ENSCLAG00000011139	TNRC6C	99	89.911	Chinchilla_lanigera
ENSSBOG00000023981	TNRC6C	100	97.913	ENSCSAG00000005167	TNRC6C	100	97.324	Chlorocebus_sabaeus
ENSSBOG00000023981	TNRC6C	76	86.377	ENSCHOG00000000088	TNRC6C	75	85.241	Choloepus_hoffmanni
ENSSBOG00000023981	TNRC6C	100	85.541	ENSCPBG00000027960	TNRC6C	100	85.367	Chrysemys_picta_bellii
ENSSBOG00000023981	TNRC6C	100	97.333	ENSCANG00000041771	TNRC6C	100	97.333	Colobus_angolensis_palliatus
ENSSBOG00000023981	TNRC6C	100	87.305	ENSCGRG00001022686	Tnrc6c	100	87.030	Cricetulus_griseus_chok1gshd
ENSSBOG00000023981	TNRC6C	100	87.710	ENSCGRG00000018041	Tnrc6c	100	87.030	Cricetulus_griseus_crigri
ENSSBOG00000023981	TNRC6C	94	49.522	ENSCSEG00000012744	tnrc6c1	98	44.026	Cynoglossus_semilaevis
ENSSBOG00000023981	TNRC6C	100	53.912	ENSDARG00000076847	tnrc6c1	99	53.916	Danio_rerio
ENSSBOG00000023981	TNRC6C	100	90.515	ENSDNOG00000003247	TNRC6C	99	88.410	Dasypus_novemcinctus
ENSSBOG00000023981	TNRC6C	100	83.862	ENSDORG00000004558	Tnrc6c	100	84.500	Dipodomys_ordii
ENSSBOG00000023981	TNRC6C	90	79.983	ENSETEG00000005527	TNRC6C	89	80.426	Echinops_telfairi
ENSSBOG00000023981	TNRC6C	100	88.818	ENSEASG00005004799	TNRC6C	100	88.818	Equus_asinus_asinus
ENSSBOG00000023981	TNRC6C	100	90.846	ENSECAG00000012486	TNRC6C	99	90.084	Equus_caballus
ENSSBOG00000023981	TNRC6C	96	91.312	ENSEEUG00000010008	TNRC6C	96	91.695	Erinaceus_europaeus
ENSSBOG00000023981	TNRC6C	100	88.428	ENSFCAG00000028358	TNRC6C	99	88.410	Felis_catus
ENSSBOG00000023981	TNRC6C	100	86.330	ENSFALG00000000848	TNRC6C	100	85.649	Ficedula_albicollis
ENSSBOG00000023981	TNRC6C	100	89.275	ENSFDAG00000010368	TNRC6C	100	89.477	Fukomys_damarensis
ENSSBOG00000023981	TNRC6C	89	69.659	ENSFHEG00000002936	tnrc6c1	99	45.722	Fundulus_heteroclitus
ENSSBOG00000023981	TNRC6C	100	88.239	ENSGALG00000001725	TNRC6C	99	87.845	Gallus_gallus
ENSSBOG00000023981	TNRC6C	100	48.621	ENSGAFG00000019019	tnrc6c1	100	47.967	Gambusia_affinis
ENSSBOG00000023981	TNRC6C	80	52.252	ENSGACG00000012320	tnrc6c1	97	48.157	Gasterosteus_aculeatus
ENSSBOG00000023981	TNRC6C	100	86.994	ENSGAGG00000022043	TNRC6C	99	86.714	Gopherus_agassizii
ENSSBOG00000023981	TNRC6C	100	97.274	ENSGGOG00000011304	TNRC6C	100	97.274	Gorilla_gorilla
ENSSBOG00000023981	TNRC6C	100	49.553	ENSHBUG00000010846	tnrc6c1	99	48.811	Haplochromis_burtoni
ENSSBOG00000023981	TNRC6C	100	90.261	ENSHGLG00000004809	TNRC6C	99	89.707	Heterocephalus_glaber_female
ENSSBOG00000023981	TNRC6C	100	89.267	ENSHGLG00100012597	TNRC6C	99	89.864	Heterocephalus_glaber_male
ENSSBOG00000023981	TNRC6C	99	50.861	ENSIPUG00000000818	tnrc6c1	98	51.509	Ictalurus_punctatus
ENSSBOG00000023981	TNRC6C	100	89.114	ENSSTOG00000009101	TNRC6C	100	88.983	Ictidomys_tridecemlineatus
ENSSBOG00000023981	TNRC6C	100	86.613	ENSJJAG00000017055	Tnrc6c	99	86.841	Jaculus_jaculus
ENSSBOG00000023981	TNRC6C	98	48.193	ENSKMAG00000021023	tnrc6c1	100	49.606	Kryptolebias_marmoratus
ENSSBOG00000023981	TNRC6C	100	73.536	ENSLACG00000015283	TNRC6C	100	74.051	Latimeria_chalumnae
ENSSBOG00000023981	TNRC6C	99	55.312	ENSLOCG00000013377	tnrc6c1	99	55.550	Lepisosteus_oculatus
ENSSBOG00000023981	TNRC6C	100	88.171	ENSLAFG00000011122	TNRC6C	99	88.604	Loxodonta_africana
ENSSBOG00000023981	TNRC6C	100	97.971	ENSMFAG00000043943	TNRC6C	100	97.971	Macaca_fascicularis
ENSSBOG00000023981	TNRC6C	100	97.971	ENSMMUG00000011924	TNRC6C	100	95.486	Macaca_mulatta
ENSSBOG00000023981	TNRC6C	100	97.963	ENSMNEG00000030405	TNRC6C	100	97.787	Macaca_nemestrina
ENSSBOG00000023981	TNRC6C	100	97.913	ENSMLEG00000033436	TNRC6C	100	97.913	Mandrillus_leucophaeus
ENSSBOG00000023981	TNRC6C	94	54.848	ENSMAMG00000023613	tnrc6c1	100	51.172	Mastacembelus_armatus
ENSSBOG00000023981	TNRC6C	100	49.445	ENSMZEG00005010920	tnrc6c1	99	48.687	Maylandia_zebra
ENSSBOG00000023981	TNRC6C	100	79.381	ENSMGAG00000003906	TNRC6C	100	79.990	Meleagris_gallopavo
ENSSBOG00000023981	TNRC6C	100	87.363	ENSMAUG00000021618	Tnrc6c	100	88.072	Mesocricetus_auratus
ENSSBOG00000023981	TNRC6C	100	93.913	ENSMICG00000003952	TNRC6C	100	93.797	Microcebus_murinus
ENSSBOG00000023981	TNRC6C	100	89.217	ENSMOCG00000015879	Tnrc6c	100	88.970	Microtus_ochrogaster
ENSSBOG00000023981	TNRC6C	93	54.187	ENSMMOG00000005203	tnrc6c1	100	49.611	Mola_mola
ENSSBOG00000023981	TNRC6C	100	84.620	ENSMODG00000001785	TNRC6C	99	84.656	Monodelphis_domestica
ENSSBOG00000023981	TNRC6C	100	88.812	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.576	Mus_caroli
ENSSBOG00000023981	TNRC6C	100	88.580	ENSMUSG00000025571	Tnrc6c	100	88.351	Mus_musculus
ENSSBOG00000023981	TNRC6C	100	88.522	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.295	Mus_pahari
ENSSBOG00000023981	TNRC6C	100	88.638	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.407	Mus_spretus
ENSSBOG00000023981	TNRC6C	100	88.651	ENSMPUG00000013348	TNRC6C	98	88.241	Mustela_putorius_furo
ENSSBOG00000023981	TNRC6C	100	81.959	ENSMLUG00000014431	TNRC6C	98	81.584	Myotis_lucifugus
ENSSBOG00000023981	TNRC6C	100	88.286	ENSNGAG00000012203	Tnrc6c	99	88.813	Nannospalax_galili
ENSSBOG00000023981	TNRC6C	98	53.682	ENSNBRG00000005344	tnrc6c1	99	49.259	Neolamprologus_brichardi
ENSSBOG00000023981	TNRC6C	100	94.634	ENSNLEG00000000047	TNRC6C	99	94.376	Nomascus_leucogenys
ENSSBOG00000023981	TNRC6C	98	78.982	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSSBOG00000023981	TNRC6C	100	89.855	ENSODEG00000012499	TNRC6C	100	90.029	Octodon_degus
ENSSBOG00000023981	TNRC6C	94	49.583	ENSONIG00000002210	tnrc6c1	96	52.556	Oreochromis_niloticus
ENSSBOG00000023981	TNRC6C	99	62.357	ENSOANG00000009758	-	100	61.507	Ornithorhynchus_anatinus
ENSSBOG00000023981	TNRC6C	84	79.186	ENSOCUG00000006122	TNRC6C	95	79.300	Oryctolagus_cuniculus
ENSSBOG00000023981	TNRC6C	92	49.162	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSSBOG00000023981	TNRC6C	92	50.330	ENSORLG00020016510	tnrc6c1	100	49.077	Oryzias_latipes_hni
ENSSBOG00000023981	TNRC6C	75	42.198	ENSORLG00015000171	tnrc6c1	98	44.628	Oryzias_latipes_hsok
ENSSBOG00000023981	TNRC6C	92	50.780	ENSOMEG00000000357	tnrc6c1	99	48.137	Oryzias_melastigma
ENSSBOG00000023981	TNRC6C	100	92.580	ENSOGAG00000007197	TNRC6C	100	92.580	Otolemur_garnettii
ENSSBOG00000023981	TNRC6C	96	84.625	ENSOARG00000006041	TNRC6C	97	84.888	Ovis_aries
ENSSBOG00000023981	TNRC6C	100	97.739	ENSPPAG00000027160	TNRC6C	100	97.739	Pan_paniscus
ENSSBOG00000023981	TNRC6C	100	88.371	ENSPPRG00000018881	TNRC6C	99	88.358	Panthera_pardus
ENSSBOG00000023981	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	68	86.133	Panthera_tigris_altaica
ENSSBOG00000023981	TNRC6C	100	97.787	ENSPTRG00000009699	TNRC6C	100	97.787	Pan_troglodytes
ENSSBOG00000023981	TNRC6C	100	97.787	ENSPANG00000019994	TNRC6C	100	97.787	Papio_anubis
ENSSBOG00000023981	TNRC6C	96	52.526	ENSPKIG00000005428	tnrc6c1	100	51.164	Paramormyrops_kingsleyae
ENSSBOG00000023981	TNRC6C	100	83.584	ENSPSIG00000018069	TNRC6C	100	83.782	Pelodiscus_sinensis
ENSSBOG00000023981	TNRC6C	80	57.294	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSSBOG00000023981	TNRC6C	100	88.344	ENSPEMG00000009785	Tnrc6c	99	88.594	Peromyscus_maniculatus_bairdii
ENSSBOG00000023981	TNRC6C	58	85.700	ENSPCIG00000017421	-	99	85.082	Phascolarctos_cinereus
ENSSBOG00000023981	TNRC6C	100	48.811	ENSPFOG00000012560	tnrc6c1	97	57.203	Poecilia_formosa
ENSSBOG00000023981	TNRC6C	100	49.860	ENSPLAG00000021055	tnrc6c1	100	50.223	Poecilia_latipinna
ENSSBOG00000023981	TNRC6C	100	98.087	ENSPPYG00000008679	TNRC6C	99	97.684	Pongo_abelii
ENSSBOG00000023981	TNRC6C	93	84.599	ENSPCAG00000012510	TNRC6C	94	85.714	Procavia_capensis
ENSSBOG00000023981	TNRC6C	100	94.377	ENSPCOG00000021451	TNRC6C	100	94.377	Propithecus_coquereli
ENSSBOG00000023981	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSSBOG00000023981	TNRC6C	100	49.250	ENSPNYG00000014477	tnrc6c1	99	48.448	Pundamilia_nyererei
ENSSBOG00000023981	TNRC6C	100	87.956	ENSRNOG00000022395	Tnrc6c	100	87.956	Rattus_norvegicus
ENSSBOG00000023981	TNRC6C	100	97.855	ENSRBIG00000027777	TNRC6C	100	97.855	Rhinopithecus_bieti
ENSSBOG00000023981	TNRC6C	100	97.913	ENSRROG00000042912	TNRC6C	100	97.913	Rhinopithecus_roxellana
ENSSBOG00000023981	TNRC6C	54	89.622	ENSSHAG00000018330	-	100	88.973	Sarcophilus_harrisii
ENSSBOG00000023981	TNRC6C	76	56.857	ENSSFOG00015004735	-	99	60.814	Scleropages_formosus
ENSSBOG00000023981	TNRC6C	79	57.271	ENSSFOG00015006475	tnrc6c1	99	51.958	Scleropages_formosus
ENSSBOG00000023981	TNRC6C	100	47.466	ENSSMAG00000012761	tnrc6c1	99	49.464	Scophthalmus_maximus
ENSSBOG00000023981	TNRC6C	100	49.218	ENSSDUG00000002366	tnrc6c1	99	49.735	Seriola_dumerili
ENSSBOG00000023981	TNRC6C	100	47.554	ENSSLDG00000025613	tnrc6c1	100	48.806	Seriola_lalandi_dorsalis
ENSSBOG00000023981	TNRC6C	91	88.235	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSSBOG00000023981	TNRC6C	85	84.295	ENSSPUG00000007341	TNRC6C	99	84.362	Sphenodon_punctatus
ENSSBOG00000023981	TNRC6C	79	53.814	ENSSPAG00000014977	tnrc6c1	98	47.957	Stegastes_partitus
ENSSBOG00000023981	TNRC6C	97	90.722	ENSSSCG00000034373	TNRC6C	100	85.168	Sus_scrofa
ENSSBOG00000023981	TNRC6C	100	85.665	ENSTGUG00000007733	TNRC6C	100	85.690	Taeniopygia_guttata
ENSSBOG00000023981	TNRC6C	87	52.099	ENSTRUG00000011685	tnrc6c1	100	49.474	Takifugu_rubripes
ENSSBOG00000023981	TNRC6C	88	52.991	ENSTNIG00000005273	tnrc6c1	100	60.550	Tetraodon_nigroviridis
ENSSBOG00000023981	TNRC6C	65	84.951	ENSTBEG00000005046	TNRC6C	100	79.422	Tupaia_belangeri
ENSSBOG00000023981	TNRC6C	100	88.555	ENSTTRG00000010828	TNRC6C	99	88.496	Tursiops_truncatus
ENSSBOG00000023981	TNRC6C	100	88.716	ENSUMAG00000013614	TNRC6C	99	88.976	Ursus_maritimus
ENSSBOG00000023981	TNRC6C	53	77.644	ENSVPAG00000006765	-	99	77.522	Vicugna_pacos
ENSSBOG00000023981	TNRC6C	100	89.172	ENSVVUG00000015268	TNRC6C	100	88.998	Vulpes_vulpes
ENSSBOG00000023981	TNRC6C	100	73.406	ENSXETG00000019470	tnrc6c	100	73.061	Xenopus_tropicalis
ENSSBOG00000023981	TNRC6C	100	48.623	ENSXMAG00000025971	tnrc6c1	99	49.174	Xiphophorus_maculatus