EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000024473 (Gene tree)
Gene ID: 101039823
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 26971 bases
Position: chrJH378160.1:2610816-2637786
Accession: 18666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000015499	RRM_1	PF00076.22	7.7e-18	1	2
ENSSBOP00000015499	RRM_1	PF00076.22	7.7e-18	2	2
ENSSBOP00000015508	RRM_1	PF00076.22	7.7e-18	1	2
ENSSBOP00000015508	RRM_1	PF00076.22	7.7e-18	2	2
ENSSBOP00000015520	RRM_1	PF00076.22	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000032300	RNPC3-201	2035	XM_010343801	ENSSBOP00000015499	515 (aa)	XP_010342103	A0A2K6T7A1
ENSSBOT00000032309	RNPC3-202	2794	XM_003933239	ENSSBOP00000015508	515 (aa)	XP_003933288	A0A2K6T7A1
ENSSBOT00000032321	RNPC3-203	855	-	ENSSBOP00000015520	284 (aa)	-	A0A2K6T7B2

Gene Model

Click here to download ENSSBOG00000024473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000024473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000024473	RNPC3	100	96.899	ENSG00000185946	RNPC3	100	100.000	Homo_sapiens
ENSSBOG00000024473	RNPC3	95	56.566	ENSAPOG00000017371	rnpc3	97	56.566	Acanthochromis_polyacanthus
ENSSBOG00000024473	RNPC3	98	91.945	ENSAMEG00000001694	RNPC3	98	91.602	Ailuropoda_melanoleuca
ENSSBOG00000024473	RNPC3	96	53.045	ENSACIG00000021043	rnpc3	97	53.507	Amphilophus_citrinellus
ENSSBOG00000024473	RNPC3	95	56.000	ENSAOCG00000014052	rnpc3	95	56.000	Amphiprion_ocellaris
ENSSBOG00000024473	RNPC3	95	55.800	ENSAPEG00000008739	rnpc3	95	55.800	Amphiprion_percula
ENSSBOG00000024473	RNPC3	95	54.563	ENSATEG00000021263	rnpc3	97	54.563	Anabas_testudineus
ENSSBOG00000024473	RNPC3	88	68.502	ENSAPLG00000015605	RNPC3	99	69.383	Anas_platyrhynchos
ENSSBOG00000024473	RNPC3	94	68.172	ENSACAG00000002029	RNPC3	96	68.826	Anolis_carolinensis
ENSSBOG00000024473	RNPC3	100	97.292	ENSANAG00000019950	RNPC3	100	97.292	Aotus_nancymaae
ENSSBOG00000024473	RNPC3	95	54.656	ENSACLG00000014702	rnpc3	96	54.656	Astatotilapia_calliptera
ENSSBOG00000024473	RNPC3	95	57.831	ENSAMXG00000033372	rnpc3	96	57.831	Astyanax_mexicanus
ENSSBOG00000024473	RNPC3	100	92.248	ENSBTAG00000019091	RNPC3	100	92.248	Bos_taurus
ENSSBOG00000024473	RNPC3	100	92.456	ENSCJAG00000035686	RNPC3	100	92.843	Callithrix_jacchus
ENSSBOG00000024473	RNPC3	100	91.313	ENSCAFG00000019972	RNPC3	100	91.313	Canis_familiaris
ENSSBOG00000024473	RNPC3	100	91.506	ENSCAFG00020011300	RNPC3	100	91.506	Canis_lupus_dingo
ENSSBOG00000024473	RNPC3	100	91.876	ENSCHIG00000020361	RNPC3	100	91.876	Capra_hircus
ENSSBOG00000024473	RNPC3	100	89.922	ENSTSYG00000030256	RNPC3	100	89.922	Carlito_syrichta
ENSSBOG00000024473	RNPC3	84	79.634	ENSCAPG00000013600	RNPC3	97	79.350	Cavia_aperea
ENSSBOG00000024473	RNPC3	100	89.942	ENSCPOG00000031638	RNPC3	100	89.942	Cavia_porcellus
ENSSBOG00000024473	RNPC3	100	97.292	ENSCCAG00000024301	RNPC3	100	97.292	Cebus_capucinus
ENSSBOG00000024473	RNPC3	99	72.745	ENSCATG00000035930	-	99	71.569	Cercocebus_atys
ENSSBOG00000024473	RNPC3	99	96.505	ENSCATG00000002086	RNPC3	99	96.505	Cercocebus_atys
ENSSBOG00000024473	RNPC3	100	87.984	ENSCLAG00000005169	RNPC3	100	87.209	Chinchilla_lanigera
ENSSBOG00000024473	RNPC3	99	96.311	ENSCSAG00000001519	RNPC3	99	96.311	Chlorocebus_sabaeus
ENSSBOG00000024473	RNPC3	96	69.461	ENSCPBG00000028311	RNPC3	97	68.836	Chrysemys_picta_bellii
ENSSBOG00000024473	RNPC3	95	37.718	ENSCING00000021276	-	98	38.677	Ciona_intestinalis
ENSSBOG00000024473	RNPC3	93	38.017	ENSCSAVG00000002800	-	74	60.833	Ciona_savignyi
ENSSBOG00000024473	RNPC3	99	96.117	ENSCANG00000031444	RNPC3	99	96.117	Colobus_angolensis_palliatus
ENSSBOG00000024473	RNPC3	98	90.647	ENSCGRG00001019276	Rnpc3	100	89.515	Cricetulus_griseus_chok1gshd
ENSSBOG00000024473	RNPC3	88	90.466	ENSCGRG00000000053	Rnpc3	100	90.466	Cricetulus_griseus_crigri
ENSSBOG00000024473	RNPC3	94	54.379	ENSCSEG00000013475	rnpc3	95	53.799	Cynoglossus_semilaevis
ENSSBOG00000024473	RNPC3	95	54.781	ENSCVAG00000002645	rnpc3	96	54.781	Cyprinodon_variegatus
ENSSBOG00000024473	RNPC3	95	56.917	ENSDARG00000011247	rnpc3	94	65.517	Danio_rerio
ENSSBOG00000024473	RNPC3	100	90.698	ENSDNOG00000047498	-	100	90.698	Dasypus_novemcinctus
ENSSBOG00000024473	RNPC3	100	90.698	ENSDNOG00000044555	-	100	90.698	Dasypus_novemcinctus
ENSSBOG00000024473	RNPC3	99	88.760	ENSDORG00000027343	Rnpc3	99	88.760	Dipodomys_ordii
ENSSBOG00000024473	RNPC3	95	48.141	ENSEBUG00000002068	rnpc3	97	47.937	Eptatretus_burgeri
ENSSBOG00000024473	RNPC3	100	91.313	ENSEASG00005015957	RNPC3	100	91.313	Equus_asinus_asinus
ENSSBOG00000024473	RNPC3	98	93.548	ENSECAG00000021148	RNPC3	100	91.506	Equus_caballus
ENSSBOG00000024473	RNPC3	95	53.551	ENSELUG00000002264	rnpc3	97	51.032	Esox_lucius
ENSSBOG00000024473	RNPC3	100	91.296	ENSFCAG00000024312	RNPC3	100	91.296	Felis_catus
ENSSBOG00000024473	RNPC3	88	70.925	ENSFALG00000002580	RNPC3	99	71.292	Ficedula_albicollis
ENSSBOG00000024473	RNPC3	99	90.116	ENSFDAG00000019948	RNPC3	100	90.116	Fukomys_damarensis
ENSSBOG00000024473	RNPC3	96	51.107	ENSFHEG00000020647	rnpc3	98	49.902	Fundulus_heteroclitus
ENSSBOG00000024473	RNPC3	95	53.200	ENSGMOG00000019213	rnpc3	96	52.410	Gadus_morhua
ENSSBOG00000024473	RNPC3	98	69.548	ENSGALG00000005162	RNPC3	91	68.959	Gallus_gallus
ENSSBOG00000024473	RNPC3	96	52.087	ENSGAFG00000017236	rnpc3	96	52.515	Gambusia_affinis
ENSSBOG00000024473	RNPC3	99	52.863	ENSGACG00000002048	rnpc3	96	55.070	Gasterosteus_aculeatus
ENSSBOG00000024473	RNPC3	96	69.416	ENSGAGG00000008438	RNPC3	95	69.618	Gopherus_agassizii
ENSSBOG00000024473	RNPC3	96	79.716	ENSGGOG00000026201	-	95	79.513	Gorilla_gorilla
ENSSBOG00000024473	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSSBOG00000024473	RNPC3	100	90.522	ENSHGLG00000001708	RNPC3	100	90.522	Heterocephalus_glaber_female
ENSSBOG00000024473	RNPC3	100	90.522	ENSHGLG00100003005	RNPC3	100	90.522	Heterocephalus_glaber_male
ENSSBOG00000024473	RNPC3	96	54.980	ENSHCOG00000017135	rnpc3	97	54.980	Hippocampus_comes
ENSSBOG00000024473	RNPC3	94	56.707	ENSIPUG00000002916	rnpc3	95	56.707	Ictalurus_punctatus
ENSSBOG00000024473	RNPC3	100	91.296	ENSSTOG00000025020	RNPC3	100	91.296	Ictidomys_tridecemlineatus
ENSSBOG00000024473	RNPC3	99	87.184	ENSJJAG00000010203	Rnpc3	100	87.573	Jaculus_jaculus
ENSSBOG00000024473	RNPC3	95	55.354	ENSKMAG00000017358	rnpc3	98	54.438	Kryptolebias_marmoratus
ENSSBOG00000024473	RNPC3	95	55.912	ENSLBEG00000024901	rnpc3	95	56.225	Labrus_bergylta
ENSSBOG00000024473	RNPC3	94	63.711	ENSLACG00000005720	RNPC3	89	64.330	Latimeria_chalumnae
ENSSBOG00000024473	RNPC3	95	58.197	ENSLOCG00000007986	rnpc3	96	60.451	Lepisosteus_oculatus
ENSSBOG00000024473	RNPC3	98	89.568	ENSLAFG00000032342	RNPC3	100	88.760	Loxodonta_africana
ENSSBOG00000024473	RNPC3	99	96.311	ENSMFAG00000002004	RNPC3	99	96.311	Macaca_fascicularis
ENSSBOG00000024473	RNPC3	99	70.254	ENSMFAG00000002917	-	99	68.885	Macaca_fascicularis
ENSSBOG00000024473	RNPC3	84	87.442	ENSMMUG00000002098	-	93	87.442	Macaca_mulatta
ENSSBOG00000024473	RNPC3	99	96.311	ENSMMUG00000018039	RNPC3	99	96.311	Macaca_mulatta
ENSSBOG00000024473	RNPC3	98	96.043	ENSMNEG00000033950	RNPC3	99	91.456	Macaca_nemestrina
ENSSBOG00000024473	RNPC3	95	71.519	ENSMNEG00000029209	-	99	67.969	Macaca_nemestrina
ENSSBOG00000024473	RNPC3	98	72.070	ENSMLEG00000034644	-	98	71.068	Mandrillus_leucophaeus
ENSSBOG00000024473	RNPC3	99	96.505	ENSMLEG00000033628	RNPC3	99	96.505	Mandrillus_leucophaeus
ENSSBOG00000024473	RNPC3	96	51.779	ENSMAMG00000007496	rnpc3	98	50.577	Mastacembelus_armatus
ENSSBOG00000024473	RNPC3	95	53.557	ENSMZEG00005020233	rnpc3	97	53.557	Maylandia_zebra
ENSSBOG00000024473	RNPC3	88	70.110	ENSMGAG00000006381	RNPC3	99	70.110	Meleagris_gallopavo
ENSSBOG00000024473	RNPC3	97	91.566	ENSMAUG00000001358	Rnpc3	100	90.097	Mesocricetus_auratus
ENSSBOG00000024473	RNPC3	99	92.636	ENSMICG00000029591	RNPC3	99	92.636	Microcebus_murinus
ENSSBOG00000024473	RNPC3	97	90.982	ENSMOCG00000013423	Rnpc3	100	88.975	Microtus_ochrogaster
ENSSBOG00000024473	RNPC3	95	51.220	ENSMMOG00000005309	rnpc3	97	51.205	Mola_mola
ENSSBOG00000024473	RNPC3	99	77.907	ENSMODG00000002946	RNPC3	99	77.907	Monodelphis_domestica
ENSSBOG00000024473	RNPC3	97	51.969	ENSMALG00000015471	rnpc3	97	52.918	Monopterus_albus
ENSSBOG00000024473	RNPC3	98	89.928	MGP_CAROLIEiJ_G0025555	Rnpc3	100	88.155	Mus_caroli
ENSSBOG00000024473	RNPC3	98	90.288	ENSMUSG00000027981	Rnpc3	99	89.849	Mus_musculus
ENSSBOG00000024473	RNPC3	98	90.288	MGP_PahariEiJ_G0027001	Rnpc3	100	88.155	Mus_pahari
ENSSBOG00000024473	RNPC3	98	89.568	MGP_SPRETEiJ_G0026505	Rnpc3	100	88.155	Mus_spretus
ENSSBOG00000024473	RNPC3	100	90.716	ENSMPUG00000007349	RNPC3	100	90.716	Mustela_putorius_furo
ENSSBOG00000024473	RNPC3	100	88.008	ENSMLUG00000028743	RNPC3	100	88.008	Myotis_lucifugus
ENSSBOG00000024473	RNPC3	99	89.494	ENSNGAG00000010939	Rnpc3	99	89.494	Nannospalax_galili
ENSSBOG00000024473	RNPC3	95	54.453	ENSNBRG00000012196	rnpc3	93	54.453	Neolamprologus_brichardi
ENSSBOG00000024473	RNPC3	100	96.512	ENSNLEG00000012013	RNPC3	100	96.512	Nomascus_leucogenys
ENSSBOG00000024473	RNPC3	100	87.984	ENSODEG00000007612	RNPC3	100	87.984	Octodon_degus
ENSSBOG00000024473	RNPC3	95	55.061	ENSONIG00000004770	rnpc3	99	55.061	Oreochromis_niloticus
ENSSBOG00000024473	RNPC3	90	77.419	ENSOANG00000008220	RNPC3	99	77.849	Ornithorhynchus_anatinus
ENSSBOG00000024473	RNPC3	100	90.698	ENSOCUG00000004016	RNPC3	100	90.698	Oryctolagus_cuniculus
ENSSBOG00000024473	RNPC3	95	53.629	ENSORLG00000005694	rnpc3	97	53.629	Oryzias_latipes
ENSSBOG00000024473	RNPC3	95	54.343	ENSORLG00020005513	rnpc3	97	54.343	Oryzias_latipes_hni
ENSSBOG00000024473	RNPC3	95	53.737	ENSORLG00015002179	rnpc3	97	53.737	Oryzias_latipes_hsok
ENSSBOG00000024473	RNPC3	95	54.453	ENSOMEG00000017737	rnpc3	97	55.556	Oryzias_melastigma
ENSSBOG00000024473	RNPC3	100	92.650	ENSOGAG00000026182	RNPC3	100	92.650	Otolemur_garnettii
ENSSBOG00000024473	RNPC3	100	91.876	ENSOARG00000018719	RNPC3	100	91.876	Ovis_aries
ENSSBOG00000024473	RNPC3	100	96.332	ENSPPAG00000037459	RNPC3	100	96.332	Pan_paniscus
ENSSBOG00000024473	RNPC3	100	78.682	ENSPPAG00000030278	-	100	78.876	Pan_paniscus
ENSSBOG00000024473	RNPC3	100	91.296	ENSPPRG00000020246	RNPC3	100	91.296	Panthera_pardus
ENSSBOG00000024473	RNPC3	98	91.716	ENSPTIG00000009887	RNPC3	100	91.716	Panthera_tigris_altaica
ENSSBOG00000024473	RNPC3	100	96.518	ENSPTRG00000033902	RNPC3	100	96.518	Pan_troglodytes
ENSSBOG00000024473	RNPC3	100	78.101	ENSPTRG00000044227	-	100	78.101	Pan_troglodytes
ENSSBOG00000024473	RNPC3	99	96.693	ENSPANG00000012137	RNPC3	99	96.693	Papio_anubis
ENSSBOG00000024473	RNPC3	98	75.246	ENSPANG00000029957	-	100	74.067	Papio_anubis
ENSSBOG00000024473	RNPC3	95	53.187	ENSPKIG00000008828	rnpc3	95	51.663	Paramormyrops_kingsleyae
ENSSBOG00000024473	RNPC3	63	68.976	ENSPSIG00000007396	RNPC3	99	67.470	Pelodiscus_sinensis
ENSSBOG00000024473	RNPC3	93	51.521	ENSPMGG00000011742	rnpc3	95	52.236	Periophthalmus_magnuspinnatus
ENSSBOG00000024473	RNPC3	89	89.912	ENSPEMG00000020112	Rnpc3	100	90.687	Peromyscus_maniculatus_bairdii
ENSSBOG00000024473	RNPC3	96	45.402	ENSPMAG00000003778	rnpc3	98	45.698	Petromyzon_marinus
ENSSBOG00000024473	RNPC3	97	80.144	ENSPCIG00000004415	-	99	77.907	Phascolarctos_cinereus
ENSSBOG00000024473	RNPC3	96	52.295	ENSPFOG00000009895	rnpc3	97	52.295	Poecilia_formosa
ENSSBOG00000024473	RNPC3	96	52.295	ENSPLAG00000012023	rnpc3	97	52.295	Poecilia_latipinna
ENSSBOG00000024473	RNPC3	96	52.883	ENSPMEG00000003663	rnpc3	97	52.495	Poecilia_mexicana
ENSSBOG00000024473	RNPC3	96	52.495	ENSPREG00000010206	rnpc3	98	52.495	Poecilia_reticulata
ENSSBOG00000024473	RNPC3	98	91.727	ENSPPYG00000001102	RNPC3	99	93.088	Pongo_abelii
ENSSBOG00000024473	RNPC3	95	54.453	ENSPNYG00000020603	rnpc3	96	54.453	Pundamilia_nyererei
ENSSBOG00000024473	RNPC3	96	54.902	ENSPNAG00000000524	rnpc3	90	55.294	Pygocentrus_nattereri
ENSSBOG00000024473	RNPC3	98	88.849	ENSRNOG00000017310	Rnpc3	100	87.767	Rattus_norvegicus
ENSSBOG00000024473	RNPC3	98	94.982	ENSRBIG00000043897	RNPC3	99	90.891	Rhinopithecus_bieti
ENSSBOG00000024473	RNPC3	99	96.699	ENSRROG00000032334	RNPC3	99	96.699	Rhinopithecus_roxellana
ENSSBOG00000024473	RNPC3	99	77.519	ENSSHAG00000011859	RNPC3	99	77.519	Sarcophilus_harrisii
ENSSBOG00000024473	RNPC3	95	58.730	ENSSFOG00015013055	rnpc3	99	57.253	Scleropages_formosus
ENSSBOG00000024473	RNPC3	95	51.800	ENSSMAG00000020346	rnpc3	97	51.068	Scophthalmus_maximus
ENSSBOG00000024473	RNPC3	95	54.582	ENSSDUG00000006600	rnpc3	96	54.582	Seriola_dumerili
ENSSBOG00000024473	RNPC3	95	55.179	ENSSLDG00000007979	rnpc3	96	55.179	Seriola_lalandi_dorsalis
ENSSBOG00000024473	RNPC3	96	65.531	ENSSPUG00000003872	-	93	65.731	Sphenodon_punctatus
ENSSBOG00000024473	RNPC3	94	70.928	ENSSPUG00000008539	-	96	69.094	Sphenodon_punctatus
ENSSBOG00000024473	RNPC3	95	55.601	ENSSPAG00000005633	rnpc3	97	56.212	Stegastes_partitus
ENSSBOG00000024473	RNPC3	100	91.279	ENSSSCG00000037254	RNPC3	100	90.116	Sus_scrofa
ENSSBOG00000024473	RNPC3	88	70.419	ENSTGUG00000004795	-	99	69.536	Taeniopygia_guttata
ENSSBOG00000024473	RNPC3	60	57.803	ENSTRUG00000022341	rnpc3	79	52.657	Takifugu_rubripes
ENSSBOG00000024473	RNPC3	95	55.110	ENSTNIG00000018963	rnpc3	97	55.110	Tetraodon_nigroviridis
ENSSBOG00000024473	RNPC3	98	92.323	ENSUMAG00000007775	RNPC3	100	92.323	Ursus_maritimus
ENSSBOG00000024473	RNPC3	100	91.506	ENSVVUG00000000331	RNPC3	100	91.506	Vulpes_vulpes
ENSSBOG00000024473	RNPC3	95	51.205	ENSXETG00000025027	rnpc3	96	51.205	Xenopus_tropicalis
ENSSBOG00000024473	RNPC3	96	51.357	ENSXCOG00000005013	rnpc3	98	50.285	Xiphophorus_couchianus
ENSSBOG00000024473	RNPC3	96	52.684	ENSXMAG00000006495	rnpc3	98	52.465	Xiphophorus_maculatus