EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000024684 (Gene tree)
Gene ID: 101048715
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 11090 bases
Position: chrJH378238.1:3790961-3802050
Accession: 12874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000015943	zf-C2H2	PF00096.26	2.6e-21	1	4
ENSSBOP00000015943	zf-C2H2	PF00096.26	2.6e-21	2	4
ENSSBOP00000015943	zf-C2H2	PF00096.26	2.6e-21	3	4
ENSSBOP00000015943	zf-C2H2	PF00096.26	2.6e-21	4	4
ENSSBOP00000015940	zf-C2H2	PF00096.26	1.6e-20	1	4
ENSSBOP00000015940	zf-C2H2	PF00096.26	1.6e-20	2	4
ENSSBOP00000015940	zf-C2H2	PF00096.26	1.6e-20	3	4
ENSSBOP00000015940	zf-C2H2	PF00096.26	1.6e-20	4	4
ENSSBOP00000015940	zf-met	PF12874.7	0.0006	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000032743	ZIC3-201	1374	-	ENSSBOP00000015940	457 (aa)	-	A0A2K6T8H9
ENSSBOT00000032746	ZIC3-202	2679	XM_003940731	ENSSBOP00000015943	467 (aa)	XP_003940780	A0A2K6T8I5

Gene Model

Click here to download ENSSBOG00000024684's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000024684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000024684	ZIC3	100	98.715	ENSG00000156925	ZIC3	100	98.715	Homo_sapiens
ENSSBOG00000024684	ZIC3	100	99.786	ENSANAG00000019614	ZIC3	100	99.786	Aotus_nancymaae
ENSSBOG00000024684	ZIC3	100	99.358	ENSCJAG00000013792	ZIC3	100	99.358	Callithrix_jacchus
ENSSBOG00000024684	ZIC3	100	98.287	ENSCAFG00000018979	ZIC3	100	98.287	Canis_familiaris
ENSSBOG00000024684	ZIC3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.503	Carlito_syrichta
ENSSBOG00000024684	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSSBOG00000024684	ZIC3	100	99.572	ENSCCAG00000025983	ZIC3	100	99.572	Cebus_capucinus
ENSSBOG00000024684	ZIC3	100	98.715	ENSCATG00000036569	ZIC3	100	98.715	Cercocebus_atys
ENSSBOG00000024684	ZIC3	100	98.501	ENSCLAG00000001934	ZIC3	100	98.501	Chinchilla_lanigera
ENSSBOG00000024684	ZIC3	93	86.239	ENSCPBG00000026115	ZIC3	100	86.239	Chrysemys_picta_bellii
ENSSBOG00000024684	ZIC3	100	98.501	ENSCANG00000017505	ZIC3	100	98.501	Colobus_angolensis_palliatus
ENSSBOG00000024684	ZIC3	100	98.715	ENSCGRG00001024527	Zic3	100	98.715	Cricetulus_griseus_chok1gshd
ENSSBOG00000024684	ZIC3	100	97.430	ENSDORG00000025481	Zic3	100	97.430	Dipodomys_ordii
ENSSBOG00000024684	ZIC3	100	98.287	ENSFCAG00000025684	ZIC3	100	98.287	Felis_catus
ENSSBOG00000024684	ZIC3	79	98.922	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSSBOG00000024684	ZIC3	94	80.682	ENSGAGG00000004149	ZIC3	92	80.682	Gopherus_agassizii
ENSSBOG00000024684	ZIC3	100	98.715	ENSGGOG00000011914	ZIC3	100	98.715	Gorilla_gorilla
ENSSBOG00000024684	ZIC3	100	97.859	ENSHGLG00000006298	ZIC3	100	97.859	Heterocephalus_glaber_female
ENSSBOG00000024684	ZIC3	67	70.066	ENSHGLG00100002829	ZIC3	100	77.707	Heterocephalus_glaber_male
ENSSBOG00000024684	ZIC3	100	98.715	ENSJJAG00000022714	Zic3	100	98.715	Jaculus_jaculus
ENSSBOG00000024684	ZIC3	100	76.496	ENSLACG00000014597	ZIC3	100	76.496	Latimeria_chalumnae
ENSSBOG00000024684	ZIC3	88	94.647	ENSLAFG00000007048	ZIC3	99	94.647	Loxodonta_africana
ENSSBOG00000024684	ZIC3	100	98.715	ENSMFAG00000027018	ZIC3	100	98.715	Macaca_fascicularis
ENSSBOG00000024684	ZIC3	100	98.468	ENSMMUG00000002023	ZIC3	100	98.468	Macaca_mulatta
ENSSBOG00000024684	ZIC3	100	98.715	ENSMNEG00000040682	ZIC3	100	98.715	Macaca_nemestrina
ENSSBOG00000024684	ZIC3	100	98.715	ENSMLEG00000004378	ZIC3	100	98.715	Mandrillus_leucophaeus
ENSSBOG00000024684	ZIC3	100	98.501	ENSMAUG00000009402	Zic3	100	98.501	Mesocricetus_auratus
ENSSBOG00000024684	ZIC3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSSBOG00000024684	ZIC3	100	98.073	ENSMOCG00000020544	Zic3	100	98.073	Microtus_ochrogaster
ENSSBOG00000024684	ZIC3	100	98.287	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSSBOG00000024684	ZIC3	100	98.287	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSSBOG00000024684	ZIC3	100	98.287	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSSBOG00000024684	ZIC3	100	98.287	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSSBOG00000024684	ZIC3	100	98.073	ENSNGAG00000023346	Zic3	100	98.073	Nannospalax_galili
ENSSBOG00000024684	ZIC3	78	98.577	ENSNLEG00000003005	-	100	98.577	Nomascus_leucogenys
ENSSBOG00000024684	ZIC3	100	98.287	ENSODEG00000005556	ZIC3	100	98.287	Octodon_degus
ENSSBOG00000024684	ZIC3	100	98.715	ENSPPAG00000030013	ZIC3	100	98.715	Pan_paniscus
ENSSBOG00000024684	ZIC3	100	98.287	ENSPPRG00000010839	ZIC3	100	98.287	Panthera_pardus
ENSSBOG00000024684	ZIC3	100	98.715	ENSPTRG00000043849	ZIC3	100	98.715	Pan_troglodytes
ENSSBOG00000024684	ZIC3	100	98.715	ENSPANG00000011357	ZIC3	100	98.715	Papio_anubis
ENSSBOG00000024684	ZIC3	100	73.774	ENSPKIG00000017705	zic3	100	73.774	Paramormyrops_kingsleyae
ENSSBOG00000024684	ZIC3	62	90.411	ENSPSIG00000011896	ZIC3	99	90.411	Pelodiscus_sinensis
ENSSBOG00000024684	ZIC3	100	98.501	ENSPEMG00000022168	Zic3	100	98.501	Peromyscus_maniculatus_bairdii
ENSSBOG00000024684	ZIC3	100	98.073	ENSPCOG00000021557	ZIC3	100	98.073	Propithecus_coquereli
ENSSBOG00000024684	ZIC3	100	97.859	ENSRNOG00000000861	Zic3	100	97.859	Rattus_norvegicus
ENSSBOG00000024684	ZIC3	100	98.501	ENSRBIG00000030660	ZIC3	100	98.501	Rhinopithecus_bieti
ENSSBOG00000024684	ZIC3	100	98.501	ENSRROG00000028410	ZIC3	100	98.501	Rhinopithecus_roxellana
ENSSBOG00000024684	ZIC3	99	74.732	ENSSFOG00015011731	zic3	100	74.732	Scleropages_formosus
ENSSBOG00000024684	ZIC3	99	68.951	ENSSFOG00015008079	zic3	100	68.951	Scleropages_formosus
ENSSBOG00000024684	ZIC3	84	83.544	ENSTGUG00000002155	ZIC3	100	83.544	Taeniopygia_guttata
ENSSBOG00000024684	ZIC3	100	98.287	ENSVVUG00000021378	ZIC3	100	98.287	Vulpes_vulpes
ENSSBOG00000024684	ZIC3	100	76.809	ENSXETG00000024458	zic3	100	76.809	Xenopus_tropicalis