EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000024764 (Gene tree)
Gene ID: 101047401
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 77848 bases
Position: chrJH378105.1:35759086-35836933
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000016321	Suf	PF05843.14	3.9e-84	1	1
ENSSBOP00000016276	Suf	PF05843.14	1.9e-83	1	1
ENSSBOP00000016289	Suf	PF05843.14	2.1e-83	1	1
ENSSBOP00000016331	Suf	PF05843.14	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000033147	CSTF3-205	276	-	ENSSBOP00000016342	91 (aa)	-	A0A2K6T9M3
ENSSBOT00000033081	CSTF3-201	2896	-	ENSSBOP00000016276	625 (aa)	-	A0A2K6T9G1
ENSSBOT00000033125	CSTF3-203	2154	XM_003919966	ENSSBOP00000016321	717 (aa)	XP_003920015	A0A2K6T9L8
ENSSBOT00000033094	CSTF3-202	2625	XM_010333188	ENSSBOP00000016289	655 (aa)	XP_010331490	A0A2K6T9H1
ENSSBOT00000033137	CSTF3-204	1380	-	ENSSBOP00000016331	459 (aa)	-	A0A2K6T9M6

Gene Model

Click here to download ENSSBOG00000024764's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000024764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000024764	CSTF3	100	100.000	ENSG00000176102	CSTF3	100	100.000	Homo_sapiens
ENSSBOG00000024764	CSTF3	98	96.659	ENSAPOG00000014054	cstf3	100	91.365	Acanthochromis_polyacanthus
ENSSBOG00000024764	CSTF3	100	99.840	ENSAMEG00000007187	CSTF3	98	99.859	Ailuropoda_melanoleuca
ENSSBOG00000024764	CSTF3	100	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSSBOG00000024764	CSTF3	98	96.659	ENSAOCG00000010930	cstf3	100	91.086	Amphiprion_ocellaris
ENSSBOG00000024764	CSTF3	98	96.659	ENSAPEG00000007903	cstf3	100	91.086	Amphiprion_percula
ENSSBOG00000024764	CSTF3	98	96.882	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSSBOG00000024764	CSTF3	98	99.777	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSSBOG00000024764	CSTF3	98	99.111	ENSACAG00000002823	CSTF3	100	95.682	Anolis_carolinensis
ENSSBOG00000024764	CSTF3	100	100.000	ENSANAG00000020699	CSTF3	100	100.000	Aotus_nancymaae
ENSSBOG00000024764	CSTF3	98	97.105	ENSACLG00000007820	cstf3	100	91.086	Astatotilapia_calliptera
ENSSBOG00000024764	CSTF3	98	94.900	ENSAMXG00000014198	cstf3	100	90.947	Astyanax_mexicanus
ENSSBOG00000024764	CSTF3	100	100.000	ENSBTAG00000008617	CSTF3	100	100.000	Bos_taurus
ENSSBOG00000024764	CSTF3	96	55.102	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSSBOG00000024764	CSTF3	100	100.000	ENSCJAG00000005533	CSTF3	100	100.000	Callithrix_jacchus
ENSSBOG00000024764	CSTF3	100	100.000	ENSCAFG00000007264	CSTF3	100	99.861	Canis_familiaris
ENSSBOG00000024764	CSTF3	100	100.000	ENSCAFG00020002715	CSTF3	99	100.000	Canis_lupus_dingo
ENSSBOG00000024764	CSTF3	100	100.000	ENSCHIG00000016418	CSTF3	100	100.000	Capra_hircus
ENSSBOG00000024764	CSTF3	100	99.520	ENSTSYG00000000451	CSTF3	100	99.577	Carlito_syrichta
ENSSBOG00000024764	CSTF3	90	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSSBOG00000024764	CSTF3	100	99.680	ENSCPOG00000005545	CSTF3	100	99.582	Cavia_porcellus
ENSSBOG00000024764	CSTF3	100	100.000	ENSCCAG00000024790	CSTF3	100	100.000	Cebus_capucinus
ENSSBOG00000024764	CSTF3	100	100.000	ENSCATG00000007080	CSTF3	100	100.000	Cercocebus_atys
ENSSBOG00000024764	CSTF3	100	100.000	ENSCLAG00000016179	CSTF3	100	100.000	Chinchilla_lanigera
ENSSBOG00000024764	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSSBOG00000024764	CSTF3	98	99.778	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSSBOG00000024764	CSTF3	98	70.312	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSSBOG00000024764	CSTF3	97	69.799	ENSCSAVG00000004851	-	100	61.785	Ciona_savignyi
ENSSBOG00000024764	CSTF3	100	100.000	ENSCANG00000035468	CSTF3	100	100.000	Colobus_angolensis_palliatus
ENSSBOG00000024764	CSTF3	100	99.520	ENSCGRG00001014773	Cstf3	100	99.303	Cricetulus_griseus_chok1gshd
ENSSBOG00000024764	CSTF3	100	99.520	ENSCGRG00000004142	Cstf3	100	99.303	Cricetulus_griseus_crigri
ENSSBOG00000024764	CSTF3	98	96.889	ENSCSEG00000014283	cstf3	100	91.074	Cynoglossus_semilaevis
ENSSBOG00000024764	CSTF3	98	95.546	ENSCVAG00000019739	cstf3	100	90.251	Cyprinodon_variegatus
ENSSBOG00000024764	CSTF3	98	97.333	ENSDARG00000018904	cstf3	100	90.934	Danio_rerio
ENSSBOG00000024764	CSTF3	100	99.520	ENSDNOG00000007366	CSTF3	99	99.020	Dasypus_novemcinctus
ENSSBOG00000024764	CSTF3	100	92.800	ENSDORG00000005898	Cstf3	99	92.102	Dipodomys_ordii
ENSSBOG00000024764	CSTF3	97	63.758	FBgn0003559	su(f)	98	57.025	Drosophila_melanogaster
ENSSBOG00000024764	CSTF3	96	99.331	ENSETEG00000017097	CSTF3	90	94.237	Echinops_telfairi
ENSSBOG00000024764	CSTF3	94	76.905	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSSBOG00000024764	CSTF3	100	99.840	ENSEASG00005019884	CSTF3	100	99.857	Equus_asinus_asinus
ENSSBOG00000024764	CSTF3	100	99.840	ENSECAG00000023338	CSTF3	100	99.857	Equus_caballus
ENSSBOG00000024764	CSTF3	100	94.142	ENSEEUG00000015167	CSTF3	100	94.142	Erinaceus_europaeus
ENSSBOG00000024764	CSTF3	98	95.556	ENSELUG00000023393	cstf3	100	89.679	Esox_lucius
ENSSBOG00000024764	CSTF3	100	99.840	ENSFCAG00000030711	CSTF3	100	99.721	Felis_catus
ENSSBOG00000024764	CSTF3	100	97.600	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSSBOG00000024764	CSTF3	100	99.861	ENSFDAG00000012082	CSTF3	100	99.861	Fukomys_damarensis
ENSSBOG00000024764	CSTF3	98	95.768	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSSBOG00000024764	CSTF3	98	95.768	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSSBOG00000024764	CSTF3	100	98.240	ENSGALG00000011685	CSTF3	100	98.050	Gallus_gallus
ENSSBOG00000024764	CSTF3	98	96.214	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSSBOG00000024764	CSTF3	98	96.214	ENSGACG00000015997	cstf3	100	90.529	Gasterosteus_aculeatus
ENSSBOG00000024764	CSTF3	98	99.778	ENSGAGG00000006200	CSTF3	100	97.214	Gopherus_agassizii
ENSSBOG00000024764	CSTF3	100	95.040	ENSGGOG00000026591	CSTF3	98	95.197	Gorilla_gorilla
ENSSBOG00000024764	CSTF3	98	97.105	ENSHBUG00000016656	cstf3	100	91.086	Haplochromis_burtoni
ENSSBOG00000024764	CSTF3	100	99.721	ENSHGLG00000017834	CSTF3	100	99.721	Heterocephalus_glaber_female
ENSSBOG00000024764	CSTF3	100	99.721	ENSHGLG00100018042	CSTF3	100	99.721	Heterocephalus_glaber_male
ENSSBOG00000024764	CSTF3	97	93.960	ENSHCOG00000015218	cstf3	100	88.858	Hippocampus_comes
ENSSBOG00000024764	CSTF3	98	96.889	ENSIPUG00000013170	CSTF3	100	90.237	Ictalurus_punctatus
ENSSBOG00000024764	CSTF3	100	100.000	ENSSTOG00000013306	CSTF3	100	100.000	Ictidomys_tridecemlineatus
ENSSBOG00000024764	CSTF3	98	100.000	ENSJJAG00000018430	Cstf3	99	87.448	Jaculus_jaculus
ENSSBOG00000024764	CSTF3	98	96.214	ENSKMAG00000010916	cstf3	100	89.833	Kryptolebias_marmoratus
ENSSBOG00000024764	CSTF3	98	96.437	ENSLBEG00000002306	cstf3	100	90.111	Labrus_bergylta
ENSSBOG00000024764	CSTF3	98	98.444	ENSLACG00000017296	CSTF3	100	93.863	Latimeria_chalumnae
ENSSBOG00000024764	CSTF3	98	97.333	ENSLOCG00000004415	cstf3	100	93.305	Lepisosteus_oculatus
ENSSBOG00000024764	CSTF3	100	99.680	ENSLAFG00000008712	CSTF3	100	99.582	Loxodonta_africana
ENSSBOG00000024764	CSTF3	100	100.000	ENSMFAG00000029516	CSTF3	100	100.000	Macaca_fascicularis
ENSSBOG00000024764	CSTF3	100	100.000	ENSMMUG00000002542	CSTF3	100	100.000	Macaca_mulatta
ENSSBOG00000024764	CSTF3	100	100.000	ENSMNEG00000021807	CSTF3	100	100.000	Macaca_nemestrina
ENSSBOG00000024764	CSTF3	100	100.000	ENSMLEG00000039594	CSTF3	100	100.000	Mandrillus_leucophaeus
ENSSBOG00000024764	CSTF3	98	96.659	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSSBOG00000024764	CSTF3	98	97.105	ENSMZEG00005012082	cstf3	100	91.086	Maylandia_zebra
ENSSBOG00000024764	CSTF3	100	98.240	ENSMGAG00000001383	CSTF3	100	98.189	Meleagris_gallopavo
ENSSBOG00000024764	CSTF3	100	99.360	ENSMAUG00000002487	Cstf3	100	99.163	Mesocricetus_auratus
ENSSBOG00000024764	CSTF3	100	99.721	ENSMICG00000004784	CSTF3	100	99.721	Microcebus_murinus
ENSSBOG00000024764	CSTF3	100	99.520	ENSMOCG00000017583	Cstf3	100	99.303	Microtus_ochrogaster
ENSSBOG00000024764	CSTF3	99	95.604	ENSMMOG00000016026	cstf3	95	91.127	Mola_mola
ENSSBOG00000024764	CSTF3	100	98.745	ENSMODG00000009745	-	100	98.745	Monodelphis_domestica
ENSSBOG00000024764	CSTF3	98	89.732	ENSMODG00000025205	-	100	84.100	Monodelphis_domestica
ENSSBOG00000024764	CSTF3	98	96.659	ENSMALG00000012050	cstf3	100	90.808	Monopterus_albus
ENSSBOG00000024764	CSTF3	100	99.520	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.303	Mus_caroli
ENSSBOG00000024764	CSTF3	100	99.520	ENSMUSG00000027176	Cstf3	100	99.303	Mus_musculus
ENSSBOG00000024764	CSTF3	100	99.520	MGP_PahariEiJ_G0025464	Cstf3	100	99.303	Mus_pahari
ENSSBOG00000024764	CSTF3	100	99.520	MGP_SPRETEiJ_G0024939	Cstf3	100	99.303	Mus_spretus
ENSSBOG00000024764	CSTF3	100	99.840	ENSMPUG00000011457	CSTF3	100	99.721	Mustela_putorius_furo
ENSSBOG00000024764	CSTF3	100	99.680	ENSMLUG00000003073	-	99	99.437	Myotis_lucifugus
ENSSBOG00000024764	CSTF3	100	96.480	ENSMLUG00000026022	-	100	96.095	Myotis_lucifugus
ENSSBOG00000024764	CSTF3	100	99.520	ENSNGAG00000010677	Cstf3	100	99.303	Nannospalax_galili
ENSSBOG00000024764	CSTF3	100	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSSBOG00000024764	CSTF3	100	100.000	ENSNLEG00000017901	CSTF3	100	100.000	Nomascus_leucogenys
ENSSBOG00000024764	CSTF3	83	99.739	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSSBOG00000024764	CSTF3	72	100.000	ENSOPRG00000000199	-	67	97.333	Ochotona_princeps
ENSSBOG00000024764	CSTF3	100	99.840	ENSODEG00000016737	-	100	99.721	Octodon_degus
ENSSBOG00000024764	CSTF3	99	88.871	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSSBOG00000024764	CSTF3	98	97.105	ENSONIG00000005563	cstf3	100	91.086	Oreochromis_niloticus
ENSSBOG00000024764	CSTF3	100	97.767	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSSBOG00000024764	CSTF3	100	99.680	ENSOCUG00000015417	CSTF3	100	99.582	Oryctolagus_cuniculus
ENSSBOG00000024764	CSTF3	98	95.333	ENSORLG00000009762	cstf3	100	90.934	Oryzias_latipes
ENSSBOG00000024764	CSTF3	98	95.333	ENSORLG00020005540	cstf3	100	90.934	Oryzias_latipes_hni
ENSSBOG00000024764	CSTF3	98	95.333	ENSORLG00015003551	cstf3	100	90.795	Oryzias_latipes_hsok
ENSSBOG00000024764	CSTF3	98	95.759	ENSOMEG00000003848	cstf3	100	90.098	Oryzias_melastigma
ENSSBOG00000024764	CSTF3	100	99.363	ENSOGAG00000010229	CSTF3	100	99.306	Otolemur_garnettii
ENSSBOG00000024764	CSTF3	100	100.000	ENSOARG00000017271	CSTF3	99	99.844	Ovis_aries
ENSSBOG00000024764	CSTF3	100	97.600	ENSPPAG00000027358	CSTF3	99	96.333	Pan_paniscus
ENSSBOG00000024764	CSTF3	100	99.840	ENSPPRG00000016852	CSTF3	100	99.721	Panthera_pardus
ENSSBOG00000024764	CSTF3	100	99.840	ENSPTIG00000008716	CSTF3	100	99.721	Panthera_tigris_altaica
ENSSBOG00000024764	CSTF3	100	100.000	ENSPTRG00000003485	CSTF3	100	100.000	Pan_troglodytes
ENSSBOG00000024764	CSTF3	100	100.000	ENSPANG00000013722	CSTF3	100	100.000	Papio_anubis
ENSSBOG00000024764	CSTF3	98	96.444	ENSPKIG00000023648	cstf3	100	92.469	Paramormyrops_kingsleyae
ENSSBOG00000024764	CSTF3	98	99.556	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSSBOG00000024764	CSTF3	98	96.222	ENSPMGG00000000164	cstf3	99	94.698	Periophthalmus_magnuspinnatus
ENSSBOG00000024764	CSTF3	100	99.360	ENSPEMG00000011481	Cstf3	100	99.163	Peromyscus_maniculatus_bairdii
ENSSBOG00000024764	CSTF3	99	86.026	ENSPMAG00000007282	cstf3	99	80.337	Petromyzon_marinus
ENSSBOG00000024764	CSTF3	98	86.222	ENSPCIG00000030419	-	90	81.894	Phascolarctos_cinereus
ENSSBOG00000024764	CSTF3	100	98.240	ENSPCIG00000026406	-	100	98.240	Phascolarctos_cinereus
ENSSBOG00000024764	CSTF3	98	96.214	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSSBOG00000024764	CSTF3	98	96.214	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSSBOG00000024764	CSTF3	98	96.214	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSSBOG00000024764	CSTF3	98	96.214	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSSBOG00000024764	CSTF3	100	100.000	ENSPPYG00000003375	CSTF3	100	100.000	Pongo_abelii
ENSSBOG00000024764	CSTF3	81	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSSBOG00000024764	CSTF3	100	95.520	ENSPCOG00000014417	CSTF3	100	94.561	Propithecus_coquereli
ENSSBOG00000024764	CSTF3	98	97.556	ENSPVAG00000002350	CSTF3	100	94.561	Pteropus_vampyrus
ENSSBOG00000024764	CSTF3	98	97.105	ENSPNYG00000018259	cstf3	100	91.086	Pundamilia_nyererei
ENSSBOG00000024764	CSTF3	98	97.778	ENSPNAG00000020182	cstf3	100	92.050	Pygocentrus_nattereri
ENSSBOG00000024764	CSTF3	100	99.200	ENSRNOG00000012089	Cstf3	100	99.200	Rattus_norvegicus
ENSSBOG00000024764	CSTF3	100	100.000	ENSRBIG00000044258	CSTF3	100	100.000	Rhinopithecus_bieti
ENSSBOG00000024764	CSTF3	100	100.000	ENSRROG00000043450	CSTF3	100	100.000	Rhinopithecus_roxellana
ENSSBOG00000024764	CSTF3	98	90.423	ENSSHAG00000003135	-	99	85.495	Sarcophilus_harrisii
ENSSBOG00000024764	CSTF3	100	98.560	ENSSHAG00000018128	-	100	97.908	Sarcophilus_harrisii
ENSSBOG00000024764	CSTF3	98	96.889	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSSBOG00000024764	CSTF3	98	95.991	ENSSMAG00000002197	cstf3	100	90.251	Scophthalmus_maximus
ENSSBOG00000024764	CSTF3	98	96.659	ENSSDUG00000020426	cstf3	100	91.086	Seriola_dumerili
ENSSBOG00000024764	CSTF3	98	96.659	ENSSLDG00000025649	cstf3	100	91.226	Seriola_lalandi_dorsalis
ENSSBOG00000024764	CSTF3	100	99.680	ENSSARG00000000391	CSTF3	100	99.582	Sorex_araneus
ENSSBOG00000024764	CSTF3	100	96.800	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSSBOG00000024764	CSTF3	98	96.659	ENSSPAG00000004958	cstf3	100	91.226	Stegastes_partitus
ENSSBOG00000024764	CSTF3	100	99.840	ENSSSCG00000040954	CSTF3	100	99.302	Sus_scrofa
ENSSBOG00000024764	CSTF3	100	97.600	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSSBOG00000024764	CSTF3	98	95.546	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSSBOG00000024764	CSTF3	99	94.518	ENSTNIG00000013811	cstf3	99	90.704	Tetraodon_nigroviridis
ENSSBOG00000024764	CSTF3	100	96.320	ENSTBEG00000001544	CSTF3	90	96.417	Tupaia_belangeri
ENSSBOG00000024764	CSTF3	100	96.932	ENSTTRG00000016366	CSTF3	100	96.932	Tursiops_truncatus
ENSSBOG00000024764	CSTF3	100	99.680	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSSBOG00000024764	CSTF3	100	99.861	ENSVPAG00000007800	CSTF3	100	99.861	Vicugna_pacos
ENSSBOG00000024764	CSTF3	100	100.000	ENSVVUG00000014938	CSTF3	100	100.000	Vulpes_vulpes
ENSSBOG00000024764	CSTF3	97	80.488	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSSBOG00000024764	CSTF3	98	40.741	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSSBOG00000024764	CSTF3	100	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSSBOG00000024764	CSTF3	98	96.214	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus