EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000024785 (Gene tree)
Gene ID: 101045261
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 8942 bases
Position: chrJH378138.1:5661883-5670824
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000016152	Gar1	PF04410.14	1.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000032957	GAR1-201	962	XM_003929460	ENSSBOP00000016152	216 (aa)	XP_003929509	A0A2K6T952

Gene Model

Click here to download ENSSBOG00000024785's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000024785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000024785	GAR1	100	95.909	ENSG00000109534	GAR1	100	95.909	Homo_sapiens
ENSSBOG00000024785	GAR1	65	88.652	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSSBOG00000024785	GAR1	50	98.165	ENSAMEG00000004605	GAR1	53	98.165	Ailuropoda_melanoleuca
ENSSBOG00000024785	GAR1	50	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSSBOG00000024785	GAR1	50	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSSBOG00000024785	GAR1	50	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSSBOG00000024785	GAR1	100	96.818	ENSANAG00000021608	GAR1	100	96.818	Aotus_nancymaae
ENSSBOG00000024785	GAR1	51	87.273	ENSAMXG00000015752	gar1	61	83.571	Astyanax_mexicanus
ENSSBOG00000024785	GAR1	50	99.083	ENSBTAG00000000748	GAR1	52	99.083	Bos_taurus
ENSSBOG00000024785	GAR1	100	96.364	ENSCJAG00000004041	GAR1	100	96.364	Callithrix_jacchus
ENSSBOG00000024785	GAR1	58	75.200	ENSCHIG00000011049	-	55	86.239	Capra_hircus
ENSSBOG00000024785	GAR1	51	99.091	ENSCHIG00000016026	-	52	99.083	Capra_hircus
ENSSBOG00000024785	GAR1	50	100.000	ENSTSYG00000013668	-	51	100.000	Carlito_syrichta
ENSSBOG00000024785	GAR1	50	91.743	ENSTSYG00000026632	-	56	91.743	Carlito_syrichta
ENSSBOG00000024785	GAR1	51	99.091	ENSCPOG00000004216	GAR1	50	99.083	Cavia_porcellus
ENSSBOG00000024785	GAR1	100	96.818	ENSCCAG00000029372	GAR1	100	96.818	Cebus_capucinus
ENSSBOG00000024785	GAR1	90	96.410	ENSCATG00000021854	GAR1	97	96.410	Cercocebus_atys
ENSSBOG00000024785	GAR1	51	97.273	ENSCLAG00000005335	GAR1	96	96.154	Chinchilla_lanigera
ENSSBOG00000024785	GAR1	90	96.410	ENSCSAG00000003922	GAR1	97	96.410	Chlorocebus_sabaeus
ENSSBOG00000024785	GAR1	57	92.683	ENSCHOG00000007484	-	51	92.683	Choloepus_hoffmanni
ENSSBOG00000024785	GAR1	51	99.091	ENSCANG00000039262	GAR1	50	99.083	Colobus_angolensis_palliatus
ENSSBOG00000024785	GAR1	50	94.393	ENSCVAG00000002103	gar1	51	94.393	Cyprinodon_variegatus
ENSSBOG00000024785	GAR1	50	91.589	ENSDARG00000076526	gar1	50	90.265	Danio_rerio
ENSSBOG00000024785	GAR1	50	99.083	ENSDNOG00000037632	GAR1	55	99.083	Dasypus_novemcinctus
ENSSBOG00000024785	GAR1	51	96.396	ENSDORG00000000482	Gar1	50	96.330	Dipodomys_ordii
ENSSBOG00000024785	GAR1	51	98.182	ENSEASG00005004658	GAR1	50	98.165	Equus_asinus_asinus
ENSSBOG00000024785	GAR1	51	99.091	ENSECAG00000013624	GAR1	55	99.083	Equus_caballus
ENSSBOG00000024785	GAR1	64	56.835	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSSBOG00000024785	GAR1	50	99.083	ENSFCAG00000040791	-	52	99.083	Felis_catus
ENSSBOG00000024785	GAR1	66	90.678	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSSBOG00000024785	GAR1	51	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSSBOG00000024785	GAR1	50	99.083	ENSGGOG00000008681	GAR1	50	99.083	Gorilla_gorilla
ENSSBOG00000024785	GAR1	50	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSSBOG00000024785	GAR1	51	90.000	ENSIPUG00000003194	gar1	62	84.733	Ictalurus_punctatus
ENSSBOG00000024785	GAR1	50	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSSBOG00000024785	GAR1	51	89.189	ENSKMAG00000010402	gar1	51	91.589	Kryptolebias_marmoratus
ENSSBOG00000024785	GAR1	69	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSSBOG00000024785	GAR1	50	84.259	ENSMFAG00000003572	-	53	83.486	Macaca_fascicularis
ENSSBOG00000024785	GAR1	51	100.000	ENSMFAG00000024592	GAR1	50	100.000	Macaca_fascicularis
ENSSBOG00000024785	GAR1	51	100.000	ENSMMUG00000021225	GAR1	50	100.000	Macaca_mulatta
ENSSBOG00000024785	GAR1	51	100.000	ENSMNEG00000042594	GAR1	50	100.000	Macaca_nemestrina
ENSSBOG00000024785	GAR1	51	100.000	ENSMLEG00000002496	GAR1	50	100.000	Mandrillus_leucophaeus
ENSSBOG00000024785	GAR1	50	96.330	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSSBOG00000024785	GAR1	52	98.214	ENSMICG00000003326	GAR1	50	99.083	Microcebus_murinus
ENSSBOG00000024785	GAR1	50	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSSBOG00000024785	GAR1	63	82.222	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSSBOG00000024785	GAR1	53	89.474	ENSMODG00000005897	GAR1	68	81.988	Monodelphis_domestica
ENSSBOG00000024785	GAR1	50	93.458	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSSBOG00000024785	GAR1	50	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSSBOG00000024785	GAR1	51	96.364	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSSBOG00000024785	GAR1	51	98.182	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSSBOG00000024785	GAR1	51	96.364	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSSBOG00000024785	GAR1	50	99.083	ENSMPUG00000008615	GAR1	52	99.083	Mustela_putorius_furo
ENSSBOG00000024785	GAR1	51	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSSBOG00000024785	GAR1	51	100.000	ENSNLEG00000016578	GAR1	50	100.000	Nomascus_leucogenys
ENSSBOG00000024785	GAR1	73	66.879	ENSNLEG00000034282	-	55	83.486	Nomascus_leucogenys
ENSSBOG00000024785	GAR1	50	98.131	ENSODEG00000011083	GAR1	56	97.248	Octodon_degus
ENSSBOG00000024785	GAR1	50	99.083	ENSOCUG00000003901	GAR1	51	99.083	Oryctolagus_cuniculus
ENSSBOG00000024785	GAR1	68	84.247	ENSORLG00000020583	gar1	62	88.971	Oryzias_latipes
ENSSBOG00000024785	GAR1	68	84.247	ENSORLG00020008602	gar1	62	88.971	Oryzias_latipes_hni
ENSSBOG00000024785	GAR1	68	84.247	ENSORLG00015017643	gar1	62	88.971	Oryzias_latipes_hsok
ENSSBOG00000024785	GAR1	68	84.247	ENSOMEG00000007911	GAR1	50	88.971	Oryzias_melastigma
ENSSBOG00000024785	GAR1	50	99.083	ENSOGAG00000004693	GAR1	51	99.083	Otolemur_garnettii
ENSSBOG00000024785	GAR1	50	99.083	ENSOARG00000004910	GAR1	52	99.083	Ovis_aries
ENSSBOG00000024785	GAR1	100	95.475	ENSPPAG00000014081	GAR1	100	95.475	Pan_paniscus
ENSSBOG00000024785	GAR1	50	99.083	ENSPPRG00000023697	GAR1	52	99.083	Panthera_pardus
ENSSBOG00000024785	GAR1	50	99.083	ENSPTIG00000021565	GAR1	52	99.083	Panthera_tigris_altaica
ENSSBOG00000024785	GAR1	79	65.294	ENSPTRG00000049340	-	68	76.761	Pan_troglodytes
ENSSBOG00000024785	GAR1	51	100.000	ENSPTRG00000016364	GAR1	55	100.000	Pan_troglodytes
ENSSBOG00000024785	GAR1	51	100.000	ENSPANG00000000639	GAR1	50	100.000	Papio_anubis
ENSSBOG00000024785	GAR1	50	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSSBOG00000024785	GAR1	50	92.593	ENSPCIG00000018912	GAR1	55	84.091	Phascolarctos_cinereus
ENSSBOG00000024785	GAR1	50	93.458	ENSPFOG00000024155	gar1	51	93.458	Poecilia_formosa
ENSSBOG00000024785	GAR1	50	93.458	ENSPLAG00000015056	gar1	51	93.458	Poecilia_latipinna
ENSSBOG00000024785	GAR1	50	94.393	ENSPMEG00000009320	gar1	51	94.393	Poecilia_mexicana
ENSSBOG00000024785	GAR1	100	95.909	ENSPPYG00000014996	GAR1	100	95.909	Pongo_abelii
ENSSBOG00000024785	GAR1	50	100.000	ENSPCOG00000027049	GAR1	56	100.000	Propithecus_coquereli
ENSSBOG00000024785	GAR1	51	97.273	ENSRNOG00000061146	Gar1	63	98.131	Rattus_norvegicus
ENSSBOG00000024785	GAR1	90	95.897	ENSRBIG00000019547	GAR1	97	95.897	Rhinopithecus_bieti
ENSSBOG00000024785	GAR1	52	82.143	ENSRBIG00000042411	-	53	81.651	Rhinopithecus_bieti
ENSSBOG00000024785	GAR1	52	82.143	ENSRROG00000044348	-	52	81.651	Rhinopithecus_roxellana
ENSSBOG00000024785	GAR1	90	96.410	ENSRROG00000028454	GAR1	97	96.410	Rhinopithecus_roxellana
ENSSBOG00000024785	GAR1	50	90.826	ENSSFOG00015013198	gar1	73	85.417	Scleropages_formosus
ENSSBOG00000024785	GAR1	50	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSSBOG00000024785	GAR1	51	99.091	ENSSSCG00000009137	GAR1	54	99.083	Sus_scrofa
ENSSBOG00000024785	GAR1	50	90.654	ENSTRUG00000020580	gar1	51	90.654	Takifugu_rubripes
ENSSBOG00000024785	GAR1	88	92.147	ENSUAMG00000005652	GAR1	94	92.147	Ursus_americanus
ENSSBOG00000024785	GAR1	50	99.083	ENSUMAG00000000776	GAR1	53	99.083	Ursus_maritimus
ENSSBOG00000024785	GAR1	50	99.083	ENSVVUG00000017612	GAR1	56	99.083	Vulpes_vulpes