EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000024982 (Gene tree)
Gene ID: 101054159
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 224053 bases
Position: chrJH378124.1:3540409-3764461
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000016602	S1	PF00575.23	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000033408	SRBD1-201	3818	XM_003926752	ENSSBOP00000016602	994 (aa)	XP_003926801	A0A2K6TAD9

Gene Model

Click here to download ENSSBOG00000024982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000024982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000024982	SRBD1	100	94.070	ENSG00000068784	SRBD1	100	94.070	Homo_sapiens
ENSSBOG00000024982	SRBD1	100	50.978	ENSAPOG00000005103	si:ch211-117n7.8	93	53.389	Acanthochromis_polyacanthus
ENSSBOG00000024982	SRBD1	100	90.553	ENSAMEG00000005993	SRBD1	100	90.553	Ailuropoda_melanoleuca
ENSSBOG00000024982	SRBD1	83	57.194	ENSACIG00000009875	si:ch211-117n7.8	97	52.400	Amphilophus_citrinellus
ENSSBOG00000024982	SRBD1	98	51.457	ENSAOCG00000024718	si:ch211-117n7.8	97	51.672	Amphiprion_ocellaris
ENSSBOG00000024982	SRBD1	97	52.530	ENSAPEG00000002645	si:ch211-117n7.8	99	52.642	Amphiprion_percula
ENSSBOG00000024982	SRBD1	99	51.581	ENSATEG00000010844	si:ch211-117n7.8	97	52.024	Anabas_testudineus
ENSSBOG00000024982	SRBD1	100	70.945	ENSAPLG00000006313	SRBD1	100	71.045	Anas_platyrhynchos
ENSSBOG00000024982	SRBD1	100	98.390	ENSANAG00000025573	SRBD1	100	98.390	Aotus_nancymaae
ENSSBOG00000024982	SRBD1	99	50.437	ENSACLG00000024219	si:ch211-117n7.8	94	52.312	Astatotilapia_calliptera
ENSSBOG00000024982	SRBD1	87	58.992	ENSAMXG00000004294	SRBD1	93	55.946	Astyanax_mexicanus
ENSSBOG00000024982	SRBD1	100	87.249	ENSBTAG00000007508	SRBD1	97	87.952	Bos_taurus
ENSSBOG00000024982	SRBD1	100	97.082	ENSCJAG00000000727	SRBD1	100	97.082	Callithrix_jacchus
ENSSBOG00000024982	SRBD1	100	89.769	ENSCAFG00000002554	SRBD1	100	89.769	Canis_familiaris
ENSSBOG00000024982	SRBD1	100	86.847	ENSCAFG00020026284	SRBD1	99	89.895	Canis_lupus_dingo
ENSSBOG00000024982	SRBD1	100	87.550	ENSCHIG00000016535	SRBD1	98	88.253	Capra_hircus
ENSSBOG00000024982	SRBD1	100	90.381	ENSTSYG00000012797	SRBD1	100	90.381	Carlito_syrichta
ENSSBOG00000024982	SRBD1	100	87.249	ENSCPOG00000004773	SRBD1	100	87.249	Cavia_porcellus
ENSSBOG00000024982	SRBD1	100	97.887	ENSCCAG00000025589	SRBD1	100	97.887	Cebus_capucinus
ENSSBOG00000024982	SRBD1	100	94.769	ENSCATG00000039530	SRBD1	100	94.769	Cercocebus_atys
ENSSBOG00000024982	SRBD1	100	88.176	ENSCLAG00000008623	SRBD1	100	88.176	Chinchilla_lanigera
ENSSBOG00000024982	SRBD1	100	94.869	ENSCSAG00000013350	SRBD1	100	94.869	Chlorocebus_sabaeus
ENSSBOG00000024982	SRBD1	93	76.183	ENSCHOG00000003805	SRBD1	93	76.183	Choloepus_hoffmanni
ENSSBOG00000024982	SRBD1	100	72.727	ENSCPBG00000005677	SRBD1	100	72.500	Chrysemys_picta_bellii
ENSSBOG00000024982	SRBD1	79	42.278	ENSCING00000005950	-	99	42.278	Ciona_intestinalis
ENSSBOG00000024982	SRBD1	79	43.199	ENSCSAVG00000000861	-	99	43.199	Ciona_savignyi
ENSSBOG00000024982	SRBD1	99	94.355	ENSCANG00000016307	SRBD1	99	94.355	Colobus_angolensis_palliatus
ENSSBOG00000024982	SRBD1	100	83.868	ENSCGRG00001000513	Srbd1	100	83.868	Cricetulus_griseus_chok1gshd
ENSSBOG00000024982	SRBD1	100	83.868	ENSCGRG00000002283	Srbd1	100	83.868	Cricetulus_griseus_crigri
ENSSBOG00000024982	SRBD1	100	50.539	ENSCSEG00000000856	si:ch211-117n7.8	88	54.821	Cynoglossus_semilaevis
ENSSBOG00000024982	SRBD1	84	56.958	ENSCVAG00000020212	si:ch211-117n7.8	97	53.871	Cyprinodon_variegatus
ENSSBOG00000024982	SRBD1	100	89.389	ENSDNOG00000018686	SRBD1	100	89.389	Dasypus_novemcinctus
ENSSBOG00000024982	SRBD1	100	86.332	ENSDORG00000010468	Srbd1	100	86.332	Dipodomys_ordii
ENSSBOG00000024982	SRBD1	94	34.441	FBgn0051156	CG31156	98	34.642	Drosophila_melanogaster
ENSSBOG00000024982	SRBD1	89	83.214	ENSETEG00000000739	SRBD1	91	83.214	Echinops_telfairi
ENSSBOG00000024982	SRBD1	73	48.844	ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	Eptatretus_burgeri
ENSSBOG00000024982	SRBD1	100	87.851	ENSEASG00005003132	SRBD1	97	93.631	Equus_asinus_asinus
ENSSBOG00000024982	SRBD1	100	90.964	ENSECAG00000013865	SRBD1	98	90.964	Equus_caballus
ENSSBOG00000024982	SRBD1	85	59.532	ENSELUG00000012592	si:ch211-117n7.8	82	59.532	Esox_lucius
ENSSBOG00000024982	SRBD1	100	90.863	ENSFCAG00000005101	SRBD1	100	90.863	Felis_catus
ENSSBOG00000024982	SRBD1	100	68.168	ENSFALG00000012966	SRBD1	100	67.668	Ficedula_albicollis
ENSSBOG00000024982	SRBD1	99	85.671	ENSFDAG00000016670	SRBD1	98	86.694	Fukomys_damarensis
ENSSBOG00000024982	SRBD1	84	57.293	ENSFHEG00000019480	si:ch211-117n7.8	83	57.293	Fundulus_heteroclitus
ENSSBOG00000024982	SRBD1	50	53.139	ENSGMOG00000018010	-	100	53.139	Gadus_morhua
ENSSBOG00000024982	SRBD1	100	70.070	ENSGALG00000009990	SRBD1	100	69.539	Gallus_gallus
ENSSBOG00000024982	SRBD1	98	50.900	ENSGAFG00000019664	si:ch211-117n7.8	84	56.604	Gambusia_affinis
ENSSBOG00000024982	SRBD1	62	60.800	ENSGACG00000010794	si:ch211-117n7.8	100	60.960	Gasterosteus_aculeatus
ENSSBOG00000024982	SRBD1	84	80.361	ENSGAGG00000006166	SRBD1	99	80.361	Gopherus_agassizii
ENSSBOG00000024982	SRBD1	97	94.221	ENSGGOG00000005910	SRBD1	99	94.179	Gorilla_gorilla
ENSSBOG00000024982	SRBD1	90	47.492	ENSHBUG00000013207	si:ch211-117n7.8	99	45.231	Haplochromis_burtoni
ENSSBOG00000024982	SRBD1	99	88.117	ENSHGLG00000018153	-	99	88.117	Heterocephalus_glaber_female
ENSSBOG00000024982	SRBD1	99	87.915	ENSHGLG00100015183	-	99	87.915	Heterocephalus_glaber_male
ENSSBOG00000024982	SRBD1	85	60.446	ENSIPUG00000009661	srbd1	85	60.446	Ictalurus_punctatus
ENSSBOG00000024982	SRBD1	100	90.151	ENSSTOG00000005898	SRBD1	100	90.151	Ictidomys_tridecemlineatus
ENSSBOG00000024982	SRBD1	100	80.642	ENSJJAG00000022244	Srbd1	100	80.642	Jaculus_jaculus
ENSSBOG00000024982	SRBD1	99	50.539	ENSKMAG00000003473	si:ch211-117n7.8	83	56.368	Kryptolebias_marmoratus
ENSSBOG00000024982	SRBD1	84	56.506	ENSLBEG00000027518	si:ch211-117n7.8	83	56.506	Labrus_bergylta
ENSSBOG00000024982	SRBD1	85	70.567	ENSLACG00000009790	SRBD1	100	70.567	Latimeria_chalumnae
ENSSBOG00000024982	SRBD1	100	57.073	ENSLOCG00000016360	si:ch211-117n7.8	99	57.073	Lepisosteus_oculatus
ENSSBOG00000024982	SRBD1	100	95.070	ENSMFAG00000042026	SRBD1	100	95.070	Macaca_fascicularis
ENSSBOG00000024982	SRBD1	100	94.769	ENSMMUG00000003490	SRBD1	100	94.769	Macaca_mulatta
ENSSBOG00000024982	SRBD1	100	92.354	ENSMNEG00000034701	SRBD1	100	92.354	Macaca_nemestrina
ENSSBOG00000024982	SRBD1	100	94.869	ENSMLEG00000000745	SRBD1	100	94.869	Mandrillus_leucophaeus
ENSSBOG00000024982	SRBD1	82	56.490	ENSMAMG00000021921	si:ch211-117n7.8	85	56.140	Mastacembelus_armatus
ENSSBOG00000024982	SRBD1	99	50.437	ENSMZEG00005027369	si:ch211-117n7.8	94	52.312	Maylandia_zebra
ENSSBOG00000024982	SRBD1	80	74.937	ENSMGAG00000010273	SRBD1	100	74.937	Meleagris_gallopavo
ENSSBOG00000024982	SRBD1	79	86.224	ENSMAUG00000013916	Srbd1	99	84.286	Mesocricetus_auratus
ENSSBOG00000024982	SRBD1	100	91.767	ENSMICG00000007835	SRBD1	100	91.767	Microcebus_murinus
ENSSBOG00000024982	SRBD1	100	83.350	ENSMOCG00000018716	Srbd1	100	83.350	Microtus_ochrogaster
ENSSBOG00000024982	SRBD1	84	56.052	ENSMMOG00000007507	si:ch211-117n7.8	87	56.052	Mola_mola
ENSSBOG00000024982	SRBD1	99	51.018	ENSMALG00000001562	si:ch211-117n7.8	93	52.400	Monopterus_albus
ENSSBOG00000024982	SRBD1	100	81.809	MGP_CAROLIEiJ_G0021934	Srbd1	99	85.623	Mus_caroli
ENSSBOG00000024982	SRBD1	100	81.910	ENSMUSG00000024135	Srbd1	99	85.204	Mus_musculus
ENSSBOG00000024982	SRBD1	100	81.024	MGP_PahariEiJ_G0020924	Srbd1	100	81.024	Mus_pahari
ENSSBOG00000024982	SRBD1	100	82.010	MGP_SPRETEiJ_G0022850	Srbd1	100	82.010	Mus_spretus
ENSSBOG00000024982	SRBD1	100	87.739	ENSMLUG00000007039	SRBD1	100	87.739	Myotis_lucifugus
ENSSBOG00000024982	SRBD1	100	82.520	ENSNGAG00000011893	Srbd1	100	82.129	Nannospalax_galili
ENSSBOG00000024982	SRBD1	90	52.876	ENSNBRG00000012873	si:ch211-117n7.8	99	50.204	Neolamprologus_brichardi
ENSSBOG00000024982	SRBD1	100	94.472	ENSNLEG00000016877	SRBD1	100	94.472	Nomascus_leucogenys
ENSSBOG00000024982	SRBD1	100	84.623	ENSODEG00000012095	SRBD1	100	84.623	Octodon_degus
ENSSBOG00000024982	SRBD1	99	50.533	ENSONIG00000000945	si:ch211-117n7.8	100	58.583	Oreochromis_niloticus
ENSSBOG00000024982	SRBD1	100	90.763	ENSOCUG00000015385	SRBD1	100	90.763	Oryctolagus_cuniculus
ENSSBOG00000024982	SRBD1	83	53.765	ENSORLG00000004427	si:ch211-117n7.8	81	53.765	Oryzias_latipes
ENSSBOG00000024982	SRBD1	83	56.757	ENSORLG00020012792	si:ch211-117n7.8	82	56.757	Oryzias_latipes_hni
ENSSBOG00000024982	SRBD1	83	56.706	ENSORLG00015018598	si:ch211-117n7.8	82	56.706	Oryzias_latipes_hsok
ENSSBOG00000024982	SRBD1	86	54.965	ENSOMEG00000012229	si:ch211-117n7.8	83	54.965	Oryzias_melastigma
ENSSBOG00000024982	SRBD1	100	84.137	ENSOGAG00000001076	SRBD1	100	84.137	Otolemur_garnettii
ENSSBOG00000024982	SRBD1	100	83.317	ENSOARG00000005958	SRBD1	100	83.996	Ovis_aries
ENSSBOG00000024982	SRBD1	100	94.372	ENSPPAG00000038442	SRBD1	100	94.372	Pan_paniscus
ENSSBOG00000024982	SRBD1	100	90.854	ENSPPRG00000003449	SRBD1	100	90.854	Panthera_pardus
ENSSBOG00000024982	SRBD1	100	90.955	ENSPTIG00000012495	SRBD1	100	90.955	Panthera_tigris_altaica
ENSSBOG00000024982	SRBD1	100	94.372	ENSPTRG00000011889	SRBD1	100	94.372	Pan_troglodytes
ENSSBOG00000024982	SRBD1	100	94.668	ENSPANG00000008063	SRBD1	100	94.668	Papio_anubis
ENSSBOG00000024982	SRBD1	96	54.280	ENSPKIG00000021973	si:ch211-117n7.8	97	54.102	Paramormyrops_kingsleyae
ENSSBOG00000024982	SRBD1	100	72.161	ENSPSIG00000008992	SRBD1	100	72.563	Pelodiscus_sinensis
ENSSBOG00000024982	SRBD1	87	53.512	ENSPMGG00000013348	si:ch211-117n7.8	95	52.456	Periophthalmus_magnuspinnatus
ENSSBOG00000024982	SRBD1	100	82.451	ENSPEMG00000020684	Srbd1	100	82.451	Peromyscus_maniculatus_bairdii
ENSSBOG00000024982	SRBD1	98	51.045	ENSPFOG00000010650	si:ch211-117n7.8	83	56.722	Poecilia_formosa
ENSSBOG00000024982	SRBD1	98	50.945	ENSPLAG00000002141	si:ch211-117n7.8	83	56.958	Poecilia_latipinna
ENSSBOG00000024982	SRBD1	98	51.142	ENSPMEG00000018537	si:ch211-117n7.8	83	56.840	Poecilia_mexicana
ENSSBOG00000024982	SRBD1	84	57.075	ENSPREG00000003258	si:ch211-117n7.8	85	57.075	Poecilia_reticulata
ENSSBOG00000024982	SRBD1	100	86.730	ENSPPYG00000012444	SRBD1	99	86.730	Pongo_abelii
ENSSBOG00000024982	SRBD1	82	82.095	ENSPCAG00000005629	SRBD1	85	82.095	Procavia_capensis
ENSSBOG00000024982	SRBD1	100	79.479	ENSPCOG00000017669	SRBD1	100	79.479	Propithecus_coquereli
ENSSBOG00000024982	SRBD1	100	81.508	ENSPVAG00000001782	SRBD1	100	81.508	Pteropus_vampyrus
ENSSBOG00000024982	SRBD1	90	51.881	ENSPNYG00000000508	si:ch211-117n7.8	99	49.287	Pundamilia_nyererei
ENSSBOG00000024982	SRBD1	96	56.625	ENSPNAG00000013492	SRBD1	95	56.625	Pygocentrus_nattereri
ENSSBOG00000024982	SRBD1	100	80.522	ENSRNOG00000014720	Srbd1	99	81.225	Rattus_norvegicus
ENSSBOG00000024982	SRBD1	99	94.254	ENSRBIG00000033486	SRBD1	99	94.254	Rhinopithecus_bieti
ENSSBOG00000024982	SRBD1	99	94.254	ENSRROG00000041599	SRBD1	99	94.254	Rhinopithecus_roxellana
ENSSBOG00000024982	SRBD1	84	59.408	ENSSFOG00015001128	si:ch211-117n7.8	90	59.408	Scleropages_formosus
ENSSBOG00000024982	SRBD1	84	57.060	ENSSMAG00000018256	si:ch211-117n7.8	83	57.176	Scophthalmus_maximus
ENSSBOG00000024982	SRBD1	86	56.336	ENSSLDG00000023189	si:ch211-117n7.8	84	56.336	Seriola_lalandi_dorsalis
ENSSBOG00000024982	SRBD1	100	77.487	ENSSARG00000009740	SRBD1	100	77.487	Sorex_araneus
ENSSBOG00000024982	SRBD1	85	77.305	ENSSPUG00000010475	SRBD1	94	77.305	Sphenodon_punctatus
ENSSBOG00000024982	SRBD1	84	54.865	ENSSPAG00000008092	-	84	54.994	Stegastes_partitus
ENSSBOG00000024982	SRBD1	100	89.056	ENSSSCG00000008445	SRBD1	98	89.659	Sus_scrofa
ENSSBOG00000024982	SRBD1	84	76.988	ENSTGUG00000003878	SRBD1	100	76.988	Taeniopygia_guttata
ENSSBOG00000024982	SRBD1	99	50.575	ENSTRUG00000007080	si:ch211-117n7.8	96	55.906	Takifugu_rubripes
ENSSBOG00000024982	SRBD1	99	49.951	ENSTNIG00000007464	si:ch211-117n7.8	97	50.301	Tetraodon_nigroviridis
ENSSBOG00000024982	SRBD1	76	98.936	ENSTBEG00000004556	SRBD1	76	98.936	Tupaia_belangeri
ENSSBOG00000024982	SRBD1	94	92.166	ENSTTRG00000011871	SRBD1	94	92.166	Tursiops_truncatus
ENSSBOG00000024982	SRBD1	100	90.361	ENSUAMG00000008126	SRBD1	97	94.203	Ursus_americanus
ENSSBOG00000024982	SRBD1	100	90.361	ENSUMAG00000012902	SRBD1	98	90.361	Ursus_maritimus
ENSSBOG00000024982	SRBD1	91	91.180	ENSVPAG00000006825	SRBD1	100	91.180	Vicugna_pacos
ENSSBOG00000024982	SRBD1	100	89.357	ENSVVUG00000005389	SRBD1	100	89.960	Vulpes_vulpes
ENSSBOG00000024982	SRBD1	100	52.642	ENSXETG00000002760	srbd1	100	52.975	Xenopus_tropicalis
ENSSBOG00000024982	SRBD1	98	51.246	ENSXMAG00000016861	si:ch211-117n7.8	97	51.212	Xiphophorus_maculatus