EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000025174 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 2468 bases
Position: chrJH378166.1:10131792-10134259
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000017030	RRM_1	PF00076.22	2.1e-26	1	2
ENSSBOP00000017030	RRM_1	PF00076.22	2.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000033837	-	1182	-	ENSSBOP00000017030	393 (aa)	-	A0A2K6TBM3

Gene Model

Click here to download ENSSBOG00000025174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000025174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000025174	-	51	39.098	ENSSBOG00000021975	-	69	38.462
ENSSBOG00000025174	-	60	35.294	ENSSBOG00000023677	PABPC3	54	35.294
ENSSBOG00000025174	-	50	30.899	ENSSBOG00000028408	TIAL1	63	34.259
ENSSBOG00000025174	-	86	35.065	ENSSBOG00000020745	-	76	35.065
ENSSBOG00000025174	-	51	30.220	ENSSBOG00000034106	TIA1	64	30.409
ENSSBOG00000025174	-	73	79.876	ENSSBOG00000012310	-	100	73.113
ENSSBOG00000025174	-	52	33.766	ENSSBOG00000009532	-	57	33.766
ENSSBOG00000025174	-	52	34.416	ENSSBOG00000022216	PABPC1	53	34.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000025174	-	73	79.567	ENSG00000143368	SF3B4	100	83.158	Homo_sapiens
ENSSBOG00000025174	-	73	79.567	ENSAMEG00000010073	SF3B4	100	72.877	Ailuropoda_melanoleuca
ENSSBOG00000025174	-	73	79.567	ENSANAG00000031025	SF3B4	100	72.877	Aotus_nancymaae
ENSSBOG00000025174	-	51	74.262	ENSACLG00000014260	sf3b4	97	56.790	Astatotilapia_calliptera
ENSSBOG00000025174	-	70	80.339	ENSBTAG00000012793	-	85	78.261	Bos_taurus
ENSSBOG00000025174	-	73	79.567	ENSBTAG00000012495	SF3B4	100	72.877	Bos_taurus
ENSSBOG00000025174	-	72	65.278	ENSCJAG00000042351	SF3B4	100	60.883	Callithrix_jacchus
ENSSBOG00000025174	-	73	79.257	ENSCAFG00000011617	SF3B4	100	72.406	Canis_familiaris
ENSSBOG00000025174	-	73	79.257	ENSCAFG00020019775	SF3B4	100	72.406	Canis_lupus_dingo
ENSSBOG00000025174	-	73	79.567	ENSCHIG00000025663	-	100	72.877	Capra_hircus
ENSSBOG00000025174	-	73	79.567	ENSTSYG00000009295	SF3B4	100	72.877	Carlito_syrichta
ENSSBOG00000025174	-	63	65.299	ENSCAPG00000006451	SF3B4	96	54.090	Cavia_aperea
ENSSBOG00000025174	-	73	79.257	ENSCPOG00000008267	SF3B4	100	72.642	Cavia_porcellus
ENSSBOG00000025174	-	73	73.994	ENSCCAG00000021751	-	68	73.668	Cebus_capucinus
ENSSBOG00000025174	-	70	78.644	ENSCCAG00000019823	-	93	69.898	Cebus_capucinus
ENSSBOG00000025174	-	73	79.567	ENSCATG00000033114	SF3B4	100	72.877	Cercocebus_atys
ENSSBOG00000025174	-	73	79.257	ENSCLAG00000015851	SF3B4	100	72.642	Chinchilla_lanigera
ENSSBOG00000025174	-	73	79.567	ENSCSAG00000018129	SF3B4	100	72.877	Chlorocebus_sabaeus
ENSSBOG00000025174	-	73	79.567	ENSCANG00000035579	SF3B4	100	72.877	Colobus_angolensis_palliatus
ENSSBOG00000025174	-	58	68.266	ENSCVAG00000005536	sf3b4	78	61.111	Cyprinodon_variegatus
ENSSBOG00000025174	-	70	81.695	ENSDNOG00000048908	-	94	74.365	Dasypus_novemcinctus
ENSSBOG00000025174	-	90	58.034	ENSDNOG00000037231	-	100	59.314	Dasypus_novemcinctus
ENSSBOG00000025174	-	73	79.567	ENSDORG00000016366	Sf3b4	100	72.877	Dipodomys_ordii
ENSSBOG00000025174	-	73	72.755	ENSETEG00000008963	SF3B4	75	72.414	Echinops_telfairi
ENSSBOG00000025174	-	73	79.567	ENSEASG00005001477	SF3B4	100	72.877	Equus_asinus_asinus
ENSSBOG00000025174	-	73	79.567	ENSECAG00000024737	SF3B4	100	72.877	Equus_caballus
ENSSBOG00000025174	-	73	79.567	ENSFCAG00000010106	SF3B4	100	72.877	Felis_catus
ENSSBOG00000025174	-	73	79.257	ENSFDAG00000009286	SF3B4	100	72.642	Fukomys_damarensis
ENSSBOG00000025174	-	56	70.833	ENSGAFG00000010181	sf3b4	78	65.517	Gambusia_affinis
ENSSBOG00000025174	-	73	79.567	ENSGGOG00000004761	SF3B4	100	72.877	Gorilla_gorilla
ENSSBOG00000025174	-	72	61.587	ENSGGOG00000038845	-	74	62.379	Gorilla_gorilla
ENSSBOG00000025174	-	51	74.262	ENSHBUG00000002028	sf3b4	97	56.790	Haplochromis_burtoni
ENSSBOG00000025174	-	73	79.257	ENSHGLG00000012360	SF3B4	100	72.642	Heterocephalus_glaber_female
ENSSBOG00000025174	-	68	61.667	ENSSTOG00000029627	-	81	56.583	Ictidomys_tridecemlineatus
ENSSBOG00000025174	-	73	79.567	ENSSTOG00000000684	-	100	72.877	Ictidomys_tridecemlineatus
ENSSBOG00000025174	-	72	66.667	ENSJJAG00000022500	Sf3b4	93	66.079	Jaculus_jaculus
ENSSBOG00000025174	-	51	74.684	ENSKMAG00000008154	sf3b4	78	63.636	Kryptolebias_marmoratus
ENSSBOG00000025174	-	50	76.293	ENSLBEG00000026818	sf3b4	76	64.263	Labrus_bergylta
ENSSBOG00000025174	-	50	75.862	ENSLOCG00000009048	sf3b4	99	57.009	Lepisosteus_oculatus
ENSSBOG00000025174	-	73	79.012	ENSLAFG00000008531	SF3B4	100	72.471	Loxodonta_africana
ENSSBOG00000025174	-	81	57.865	ENSMFAG00000039067	-	89	55.337	Macaca_fascicularis
ENSSBOG00000025174	-	73	79.567	ENSMFAG00000042395	SF3B4	100	72.877	Macaca_fascicularis
ENSSBOG00000025174	-	73	79.567	ENSMMUG00000007256	SF3B4	100	72.877	Macaca_mulatta
ENSSBOG00000025174	-	81	57.584	ENSMNEG00000031526	-	89	55.056	Macaca_nemestrina
ENSSBOG00000025174	-	73	79.567	ENSMNEG00000031839	SF3B4	100	72.877	Macaca_nemestrina
ENSSBOG00000025174	-	73	79.567	ENSMLEG00000038667	SF3B4	100	72.877	Mandrillus_leucophaeus
ENSSBOG00000025174	-	51	75.527	ENSMAMG00000014692	sf3b4	97	57.960	Mastacembelus_armatus
ENSSBOG00000025174	-	51	74.262	ENSMZEG00005026741	sf3b4	97	56.790	Maylandia_zebra
ENSSBOG00000025174	-	73	79.567	ENSMICG00000044961	SF3B4	100	72.877	Microcebus_murinus
ENSSBOG00000025174	-	73	79.257	ENSMOCG00000013658	-	100	72.642	Microtus_ochrogaster
ENSSBOG00000025174	-	72	77.955	ENSMOCG00000014155	-	100	69.704	Microtus_ochrogaster
ENSSBOG00000025174	-	73	79.567	ENSMODG00000018767	SF3B4	100	73.113	Monodelphis_domestica
ENSSBOG00000025174	-	73	79.257	MGP_CAROLIEiJ_G0025365	Sf3b4	100	72.642	Mus_caroli
ENSSBOG00000025174	-	73	79.567	ENSMPUG00000005563	SF3B4	100	72.877	Mustela_putorius_furo
ENSSBOG00000025174	-	73	79.257	ENSMLUG00000010789	SF3B4	100	72.642	Myotis_lucifugus
ENSSBOG00000025174	-	73	78.947	ENSNGAG00000016337	Sf3b4	100	72.406	Nannospalax_galili
ENSSBOG00000025174	-	51	74.684	ENSNBRG00000013865	sf3b4	97	57.037	Neolamprologus_brichardi
ENSSBOG00000025174	-	91	64.885	ENSNLEG00000000537	-	92	65.746	Nomascus_leucogenys
ENSSBOG00000025174	-	50	91.837	ENSMEUG00000003272	SF3B4	70	81.707	Notamacropus_eugenii
ENSSBOG00000025174	-	79	63.333	ENSODEG00000008916	-	93	58.127	Octodon_degus
ENSSBOG00000025174	-	71	69.401	ENSODEG00000003597	-	79	69.401	Octodon_degus
ENSSBOG00000025174	-	51	73.840	ENSONIG00000002730	sf3b4	97	57.037	Oreochromis_niloticus
ENSSBOG00000025174	-	73	79.567	ENSOCUG00000004614	SF3B4	100	72.877	Oryctolagus_cuniculus
ENSSBOG00000025174	-	50	75.431	ENSORLG00000003062	sf3b4	98	57.002	Oryzias_latipes
ENSSBOG00000025174	-	50	75.431	ENSORLG00020000687	sf3b4	98	57.002	Oryzias_latipes_hni
ENSSBOG00000025174	-	50	75.431	ENSORLG00015010989	sf3b4	98	57.002	Oryzias_latipes_hsok
ENSSBOG00000025174	-	50	75.431	ENSOMEG00000013694	sf3b4	77	64.577	Oryzias_melastigma
ENSSBOG00000025174	-	73	79.567	ENSOGAG00000006265	SF3B4	100	72.877	Otolemur_garnettii
ENSSBOG00000025174	-	80	63.202	ENSOARG00000007368	-	95	58.418	Ovis_aries
ENSSBOG00000025174	-	73	79.567	ENSOARG00000020718	-	100	72.877	Ovis_aries
ENSSBOG00000025174	-	72	74.603	ENSPPAG00000030024	-	75	74.277	Pan_paniscus
ENSSBOG00000025174	-	73	79.567	ENSPPAG00000040904	SF3B4	100	72.877	Pan_paniscus
ENSSBOG00000025174	-	73	79.567	ENSPPRG00000007384	SF3B4	100	72.877	Panthera_pardus
ENSSBOG00000025174	-	73	79.567	ENSPTIG00000014530	SF3B4	100	72.642	Panthera_tigris_altaica
ENSSBOG00000025174	-	72	72.381	ENSPTRG00000049727	-	74	71.704	Pan_troglodytes
ENSSBOG00000025174	-	73	79.567	ENSPTRG00000001243	SF3B4	100	72.877	Pan_troglodytes
ENSSBOG00000025174	-	73	79.567	ENSPANG00000005126	SF3B4	100	72.877	Papio_anubis
ENSSBOG00000025174	-	50	75.966	ENSPKIG00000020669	sf3b4	82	65.312	Paramormyrops_kingsleyae
ENSSBOG00000025174	-	56	68.217	ENSPMAG00000007842	-	54	71.930	Petromyzon_marinus
ENSSBOG00000025174	-	73	79.567	ENSPCIG00000008765	SF3B4	100	73.113	Phascolarctos_cinereus
ENSSBOG00000025174	-	51	73.840	ENSPFOG00000005754	sf3b4	78	64.263	Poecilia_formosa
ENSSBOG00000025174	-	51	73.840	ENSPLAG00000001401	sf3b4	85	64.263	Poecilia_latipinna
ENSSBOG00000025174	-	51	73.840	ENSPREG00000011076	sf3b4	79	61.012	Poecilia_reticulata
ENSSBOG00000025174	-	73	79.567	ENSPCOG00000015399	SF3B4	100	72.877	Propithecus_coquereli
ENSSBOG00000025174	-	73	79.567	ENSPVAG00000014171	SF3B4	100	72.877	Pteropus_vampyrus
ENSSBOG00000025174	-	51	74.262	ENSPNYG00000012700	sf3b4	97	56.790	Pundamilia_nyererei
ENSSBOG00000025174	-	73	79.567	ENSRBIG00000043392	SF3B4	100	72.877	Rhinopithecus_bieti
ENSSBOG00000025174	-	86	55.467	ENSRROG00000028213	-	97	53.708	Rhinopithecus_roxellana
ENSSBOG00000025174	-	73	79.567	ENSRROG00000029366	SF3B4	100	72.877	Rhinopithecus_roxellana
ENSSBOG00000025174	-	73	78.981	ENSSHAG00000004043	SF3B4	100	74.541	Sarcophilus_harrisii
ENSSBOG00000025174	-	51	75.105	ENSSFOG00015008864	sf3b4	76	65.000	Scleropages_formosus
ENSSBOG00000025174	-	53	74.286	ENSSPUG00000001028	SF3B4	88	63.228	Sphenodon_punctatus
ENSSBOG00000025174	-	73	79.257	ENSSSCG00000006665	-	100	72.642	Sus_scrofa
ENSSBOG00000025174	-	74	53.846	ENSSSCG00000039440	-	77	52.830	Sus_scrofa
ENSSBOG00000025174	-	50	75.641	ENSTGUG00000004470	SF3B4	92	75.641	Taeniopygia_guttata
ENSSBOG00000025174	-	73	79.567	ENSTTRG00000005217	SF3B4	100	72.877	Tursiops_truncatus
ENSSBOG00000025174	-	73	79.567	ENSUAMG00000022468	SF3B4	100	72.877	Ursus_americanus
ENSSBOG00000025174	-	71	80.064	ENSVPAG00000008152	SF3B4	100	73.058	Vicugna_pacos
ENSSBOG00000025174	-	72	78.997	ENSVVUG00000007732	-	100	70.171	Vulpes_vulpes
ENSSBOG00000025174	-	51	73.276	ENSXETG00000011038	sf3b4	58	73.756	Xenopus_tropicalis