EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000025673 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 1097 bases
Position: chrJH378106.1:57587332-57588428
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000018073	APOBEC_N	PF08210.11	3.4e-60	1	2
ENSSBOP00000018073	APOBEC_N	PF08210.11	3.4e-60	2	2
ENSSBOP00000018073	APOBEC_C	PF05240.14	8.1e-34	1	2
ENSSBOP00000018073	APOBEC_C	PF05240.14	8.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000034888	-	987	-	ENSSBOP00000018073	328 (aa)	-	A0A2K6TEK1

Gene Model

Click here to download ENSSBOG00000025673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000025673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000025673	-	75	42.029	ENSSBOG00000035758	AICDA	87	42.029
ENSSBOG00000025673	-	100	65.924	ENSSBOG00000018208	-	100	65.924
ENSSBOG00000025673	-	99	77.027	ENSSBOG00000023468	-	78	77.027
ENSSBOG00000025673	-	90	57.754	ENSSBOG00000029091	-	91	57.754
ENSSBOG00000025673	-	99	67.760	ENSSBOG00000021384	-	94	67.760
ENSSBOG00000025673	-	99	44.030	ENSSBOG00000032780	-	100	44.030
ENSSBOG00000025673	-	89	34.595	ENSSBOG00000030005	APOBEC3H	98	34.595
ENSSBOG00000025673	-	100	73.118	ENSSBOG00000026566	-	97	73.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000025673	-	99	59.517	ENSG00000239713	APOBEC3G	97	59.517	Homo_sapiens
ENSSBOG00000025673	-	90	47.090	ENSAMEG00000010815	-	82	47.090	Ailuropoda_melanoleuca
ENSSBOG00000025673	-	100	75.806	ENSANAG00000031271	APOBEC3G	97	75.806	Aotus_nancymaae
ENSSBOG00000025673	-	97	73.278	ENSANAG00000027961	-	100	73.278	Aotus_nancymaae
ENSSBOG00000025673	-	99	68.665	ENSANAG00000028416	-	97	68.665	Aotus_nancymaae
ENSSBOG00000025673	-	90	58.511	ENSANAG00000020573	-	94	58.511	Aotus_nancymaae
ENSSBOG00000025673	-	85	46.667	ENSBTAG00000037800	-	98	46.667	Bos_taurus
ENSSBOG00000025673	-	91	57.459	ENSCJAG00000011578	-	73	57.459	Callithrix_jacchus
ENSSBOG00000025673	-	100	70.699	ENSCJAG00000023368	APOBEC3G	97	70.699	Callithrix_jacchus
ENSSBOG00000025673	-	99	42.347	ENSCAFG00000015211	-	97	42.347	Canis_familiaris
ENSSBOG00000025673	-	87	44.271	ENSCAFG00020002641	-	81	43.750	Canis_lupus_dingo
ENSSBOG00000025673	-	87	43.684	ENSCAFG00020002661	-	80	43.684	Canis_lupus_dingo
ENSSBOG00000025673	-	93	43.011	ENSCHIG00000012694	-	90	43.646	Capra_hircus
ENSSBOG00000025673	-	100	75.538	ENSCCAG00000032509	-	99	75.538	Cebus_capucinus
ENSSBOG00000025673	-	90	59.043	ENSCCAG00000030928	-	91	59.043	Cebus_capucinus
ENSSBOG00000025673	-	99	69.003	ENSCCAG00000033147	-	93	68.919	Cebus_capucinus
ENSSBOG00000025673	-	100	70.699	ENSCCAG00000032232	-	97	70.699	Cebus_capucinus
ENSSBOG00000025673	-	99	55.620	ENSCSAG00000006376	APOBEC3G	85	55.620	Chlorocebus_sabaeus
ENSSBOG00000025673	-	99	56.667	ENSCANG00000029968	-	73	56.667	Colobus_angolensis_palliatus
ENSSBOG00000025673	-	92	34.021	ENSDNOG00000039749	-	84	36.082	Dasypus_novemcinctus
ENSSBOG00000025673	-	87	50.000	ENSEASG00005018643	-	80	50.000	Equus_asinus_asinus
ENSSBOG00000025673	-	86	51.934	ENSECAG00000032756	-	63	51.934	Equus_caballus
ENSSBOG00000025673	-	87	48.663	ENSECAG00000022371	APOBEC3Z1B	81	48.663	Equus_caballus
ENSSBOG00000025673	-	99	58.402	ENSGGOG00000013750	APOBEC3G	96	58.402	Gorilla_gorilla
ENSSBOG00000025673	-	90	31.551	ENSHCOG00000007604	-	51	31.551	Hippocampus_comes
ENSSBOG00000025673	-	85	50.000	ENSLAFG00000008890	-	88	50.000	Loxodonta_africana
ENSSBOG00000025673	-	91	51.136	ENSLAFG00000005275	-	98	51.136	Loxodonta_africana
ENSSBOG00000025673	-	99	39.062	ENSLAFG00000020906	-	97	40.217	Loxodonta_africana
ENSSBOG00000025673	-	99	59.299	ENSMFAG00000044711	APOBEC3G	85	59.299	Macaca_fascicularis
ENSSBOG00000025673	-	99	58.445	ENSMMUG00000039346	APOBEC3G	95	58.082	Macaca_mulatta
ENSSBOG00000025673	-	99	59.569	ENSMNEG00000038847	APOBEC3G	94	59.409	Macaca_nemestrina
ENSSBOG00000025673	-	99	57.258	ENSMLEG00000024444	APOBEC3G	93	57.258	Mandrillus_leucophaeus
ENSSBOG00000025673	-	87	51.075	ENSMICG00000043748	-	92	51.075	Microcebus_murinus
ENSSBOG00000025673	-	89	48.370	ENSMICG00000047191	-	98	48.370	Microcebus_murinus
ENSSBOG00000025673	-	86	46.629	ENSMPUG00000013235	-	94	46.629	Mustela_putorius_furo
ENSSBOG00000025673	-	87	41.848	ENSMLUG00000023022	-	83	41.848	Myotis_lucifugus
ENSSBOG00000025673	-	86	40.000	ENSMLUG00000000517	-	100	40.000	Myotis_lucifugus
ENSSBOG00000025673	-	86	40.000	ENSMLUG00000014565	-	100	40.000	Myotis_lucifugus
ENSSBOG00000025673	-	99	33.129	ENSMLUG00000024853	-	100	33.129	Myotis_lucifugus
ENSSBOG00000025673	-	86	37.222	ENSMLUG00000028652	-	80	37.158	Myotis_lucifugus
ENSSBOG00000025673	-	99	34.501	ENSMLUG00000000977	-	96	34.501	Myotis_lucifugus
ENSSBOG00000025673	-	99	47.015	ENSMLUG00000008631	-	100	47.015	Myotis_lucifugus
ENSSBOG00000025673	-	82	48.039	ENSMLUG00000026771	-	73	48.039	Myotis_lucifugus
ENSSBOG00000025673	-	91	41.304	ENSMLUG00000024957	-	85	41.304	Myotis_lucifugus
ENSSBOG00000025673	-	99	50.629	ENSNLEG00000018922	-	98	50.629	Nomascus_leucogenys
ENSSBOG00000025673	-	87	43.889	ENSOPRG00000002326	-	99	43.889	Ochotona_princeps
ENSSBOG00000025673	-	84	45.294	ENSOCUG00000023532	-	65	45.294	Oryctolagus_cuniculus
ENSSBOG00000025673	-	99	56.452	ENSOGAG00000032518	-	97	56.452	Otolemur_garnettii
ENSSBOG00000025673	-	90	53.439	ENSOGAG00000024822	-	93	53.439	Otolemur_garnettii
ENSSBOG00000025673	-	89	44.262	ENSOARG00000016213	APOBEC3Z1	98	44.262	Ovis_aries
ENSSBOG00000025673	-	99	57.186	ENSPPAG00000033277	-	81	57.186	Pan_paniscus
ENSSBOG00000025673	-	99	60.322	ENSPTRG00000014387	APOBEC3G	97	60.322	Pan_troglodytes
ENSSBOG00000025673	-	99	57.527	ENSPPYG00000011833	APOBEC3G	93	57.527	Pongo_abelii
ENSSBOG00000025673	-	65	46.721	ENSPCAG00000001848	-	97	46.721	Procavia_capensis
ENSSBOG00000025673	-	99	37.778	ENSPCAG00000015518	-	76	37.778	Procavia_capensis
ENSSBOG00000025673	-	86	49.419	ENSPCOG00000016357	-	85	49.419	Propithecus_coquereli
ENSSBOG00000025673	-	90	43.011	ENSPVAG00000004045	-	93	43.011	Pteropus_vampyrus
ENSSBOG00000025673	-	99	56.918	ENSRBIG00000035436	APOBEC3G	91	56.740	Rhinopithecus_bieti
ENSSBOG00000025673	-	85	47.191	ENSTTRG00000009395	-	90	47.191	Tursiops_truncatus
ENSSBOG00000025673	-	90	47.826	ENSUMAG00000002249	-	88	47.826	Ursus_maritimus
ENSSBOG00000025673	-	90	46.842	ENSUMAG00000014447	-	94	46.842	Ursus_maritimus