EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000025786 (Gene tree)
Gene ID: 101028007
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 10077 bases
Position: chrJH378190.1:9188720-9198796
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000018385	tRNA-synt_1c_C	PF03950.18	6.9e-44	1	1
ENSSBOP00000018363	tRNA-synt_1c_C	PF03950.18	7.3e-44	1	1
ENSSBOP00000018363	tRNA_synt_1c_R2	PF04557.15	1.7e-27	1	1
ENSSBOP00000018385	tRNA_synt_1c_R2	PF04557.15	1.7e-14	1	1
ENSSBOP00000018363	tRNA_synt_1c_R1	PF04558.15	2.7e-51	1	1
ENSSBOP00000018385	tRNA_synt_1c_R1	PF04558.15	3.3e-51	1	1
ENSSBOP00000018385	tRNA-synt_1c	PF00749.21	1.5e-116	1	1
ENSSBOP00000018363	tRNA-synt_1c	PF00749.21	1.7e-116	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000035179	-	2675	XM_003936673	ENSSBOP00000018363	775 (aa)	XP_003936722	A0A2K6TFD9
ENSSBOT00000035201	-	2256	-	ENSSBOP00000018385	751 (aa)	-	A0A2K6TFI4

Gene Model

Click here to download ENSSBOG00000025786's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq00970	Aminoacyl-tRNA biosynthesis	KEGG
sbq01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000025786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000025786	-	100	74.359	ENSSBOG00000020207	-	90	92.766
ENSSBOG00000025786	-	60	35.256	ENSSBOG00000029926	EPRS	53	42.609
ENSSBOG00000025786	-	95	73.984	ENSSBOG00000025151	-	100	73.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000025786	-	100	96.774	ENSG00000172053	QARS	99	99.405	Homo_sapiens
ENSSBOG00000025786	-	99	74.599	ENSAPOG00000000838	qars	99	74.599	Acanthochromis_polyacanthus
ENSSBOG00000025786	-	100	92.645	ENSAMEG00000012838	QARS	100	92.645	Ailuropoda_melanoleuca
ENSSBOG00000025786	-	99	73.698	ENSACIG00000022417	qars	99	73.698	Amphilophus_citrinellus
ENSSBOG00000025786	-	99	74.332	ENSAOCG00000004800	qars	99	74.465	Amphiprion_ocellaris
ENSSBOG00000025786	-	99	73.635	ENSAPEG00000012849	qars	99	73.768	Amphiprion_percula
ENSSBOG00000025786	-	99	74.289	ENSATEG00000008797	qars	99	74.289	Anabas_testudineus
ENSSBOG00000025786	-	78	67.430	ENSAPLG00000007248	QARS	100	67.816	Anas_platyrhynchos
ENSSBOG00000025786	-	99	78.368	ENSACAG00000012645	QARS	99	78.368	Anolis_carolinensis
ENSSBOG00000025786	-	86	88.462	ENSANAG00000028366	-	96	88.462	Aotus_nancymaae
ENSSBOG00000025786	-	100	98.668	ENSANAG00000031868	-	100	98.668	Aotus_nancymaae
ENSSBOG00000025786	-	99	76.585	ENSAMXG00000014553	qars	99	76.714	Astyanax_mexicanus
ENSSBOG00000025786	-	100	92.516	ENSBTAG00000018928	QARS	100	92.516	Bos_taurus
ENSSBOG00000025786	-	100	98.452	ENSCJAG00000003457	QARS	100	98.452	Callithrix_jacchus
ENSSBOG00000025786	-	100	92.645	ENSCAFG00000011846	QARS	100	92.645	Canis_familiaris
ENSSBOG00000025786	-	100	92.645	ENSCAFG00020020980	QARS	100	92.645	Canis_lupus_dingo
ENSSBOG00000025786	-	100	92.774	ENSCHIG00000022953	QARS	100	92.774	Capra_hircus
ENSSBOG00000025786	-	100	94.452	ENSTSYG00000008462	QARS	100	94.452	Carlito_syrichta
ENSSBOG00000025786	-	100	90.194	ENSCPOG00000009967	QARS	100	90.194	Cavia_porcellus
ENSSBOG00000025786	-	100	97.429	ENSCCAG00000037772	-	100	97.429	Cebus_capucinus
ENSSBOG00000025786	-	88	88.470	ENSCCAG00000031010	-	100	88.470	Cebus_capucinus
ENSSBOG00000025786	-	100	88.703	ENSCCAG00000034381	-	100	88.703	Cebus_capucinus
ENSSBOG00000025786	-	100	96.387	ENSCATG00000037275	QARS	100	96.387	Cercocebus_atys
ENSSBOG00000025786	-	100	90.839	ENSCLAG00000009982	QARS	100	90.839	Chinchilla_lanigera
ENSSBOG00000025786	-	100	96.129	ENSCSAG00000015198	QARS	100	96.129	Chlorocebus_sabaeus
ENSSBOG00000025786	-	93	85.535	ENSCHOG00000001084	QARS	93	85.535	Choloepus_hoffmanni
ENSSBOG00000025786	-	99	80.620	ENSCPBG00000008614	QARS	99	80.620	Chrysemys_picta_bellii
ENSSBOG00000025786	-	100	96.405	ENSCANG00000034041	QARS	100	96.667	Colobus_angolensis_palliatus
ENSSBOG00000025786	-	100	90.581	ENSCGRG00001021363	Qars	100	90.581	Cricetulus_griseus_chok1gshd
ENSSBOG00000025786	-	100	90.581	ENSCGRG00000006805	Qars	100	90.581	Cricetulus_griseus_crigri
ENSSBOG00000025786	-	99	72.458	ENSCSEG00000021387	qars	100	73.217	Cynoglossus_semilaevis
ENSSBOG00000025786	-	99	74.031	ENSCVAG00000012209	qars	99	74.031	Cyprinodon_variegatus
ENSSBOG00000025786	-	99	74.352	ENSDARG00000010316	qars	99	74.352	Danio_rerio
ENSSBOG00000025786	-	100	91.355	ENSDNOG00000014157	QARS	94	91.355	Dasypus_novemcinctus
ENSSBOG00000025786	-	74	89.418	ENSETEG00000006900	QARS	88	89.418	Echinops_telfairi
ENSSBOG00000025786	-	93	56.727	ENSEBUG00000010287	qars	99	56.727	Eptatretus_burgeri
ENSSBOG00000025786	-	100	92.010	ENSEASG00005010497	QARS	100	92.010	Equus_asinus_asinus
ENSSBOG00000025786	-	100	92.010	ENSECAG00000000809	QARS	100	92.010	Equus_caballus
ENSSBOG00000025786	-	100	83.226	ENSEEUG00000004666	QARS	100	83.226	Erinaceus_europaeus
ENSSBOG00000025786	-	99	73.739	ENSELUG00000024142	qars	99	73.739	Esox_lucius
ENSSBOG00000025786	-	100	93.677	ENSFCAG00000009846	QARS	100	93.677	Felis_catus
ENSSBOG00000025786	-	99	79.194	ENSFALG00000013066	QARS	99	79.194	Ficedula_albicollis
ENSSBOG00000025786	-	100	90.968	ENSFDAG00000010076	QARS	100	90.968	Fukomys_damarensis
ENSSBOG00000025786	-	99	73.840	ENSFHEG00000003621	qars	99	73.840	Fundulus_heteroclitus
ENSSBOG00000025786	-	99	73.840	ENSGMOG00000016875	qars	99	73.840	Gadus_morhua
ENSSBOG00000025786	-	99	78.385	ENSGALG00000029980	QARS	92	78.182	Gallus_gallus
ENSSBOG00000025786	-	99	74.332	ENSGAFG00000021070	qars	99	74.332	Gambusia_affinis
ENSSBOG00000025786	-	99	72.938	ENSGACG00000002887	qars	99	72.938	Gasterosteus_aculeatus
ENSSBOG00000025786	-	100	96.903	ENSGGOG00000014882	QARS	100	96.903	Gorilla_gorilla
ENSSBOG00000025786	-	99	74.419	ENSHBUG00000000168	qars	99	74.419	Haplochromis_burtoni
ENSSBOG00000025786	-	100	91.611	ENSHGLG00000014071	QARS	100	91.611	Heterocephalus_glaber_female
ENSSBOG00000025786	-	100	91.744	ENSHGLG00100014107	QARS	100	91.744	Heterocephalus_glaber_male
ENSSBOG00000025786	-	99	72.186	ENSHCOG00000008150	qars	99	72.186	Hippocampus_comes
ENSSBOG00000025786	-	99	74.741	ENSIPUG00000022101	qars	93	74.741	Ictalurus_punctatus
ENSSBOG00000025786	-	100	94.274	ENSSTOG00000001822	QARS	100	94.274	Ictidomys_tridecemlineatus
ENSSBOG00000025786	-	100	88.387	ENSJJAG00000010985	Qars	100	88.387	Jaculus_jaculus
ENSSBOG00000025786	-	99	74.548	ENSKMAG00000015716	qars	99	74.548	Kryptolebias_marmoratus
ENSSBOG00000025786	-	99	71.162	ENSLBEG00000008312	qars	99	71.162	Labrus_bergylta
ENSSBOG00000025786	-	100	75.258	ENSLACG00000005667	QARS	100	75.161	Latimeria_chalumnae
ENSSBOG00000025786	-	99	76.295	ENSLOCG00000014502	qars	99	76.295	Lepisosteus_oculatus
ENSSBOG00000025786	-	100	90.968	ENSLAFG00000012841	QARS	100	90.968	Loxodonta_africana
ENSSBOG00000025786	-	100	96.387	ENSMFAG00000033478	QARS	100	96.387	Macaca_fascicularis
ENSSBOG00000025786	-	100	96.387	ENSMMUG00000002943	QARS	100	96.387	Macaca_mulatta
ENSSBOG00000025786	-	100	96.387	ENSMNEG00000035096	QARS	100	96.387	Macaca_nemestrina
ENSSBOG00000025786	-	100	96.258	ENSMLEG00000042334	QARS	100	96.258	Mandrillus_leucophaeus
ENSSBOG00000025786	-	99	74.548	ENSMAMG00000012801	qars	99	74.548	Mastacembelus_armatus
ENSSBOG00000025786	-	99	74.419	ENSMZEG00005024193	qars	99	74.419	Maylandia_zebra
ENSSBOG00000025786	-	84	80.894	ENSMGAG00000008134	QARS	99	80.894	Meleagris_gallopavo
ENSSBOG00000025786	-	100	91.355	ENSMAUG00000022218	Qars	100	91.355	Mesocricetus_auratus
ENSSBOG00000025786	-	100	93.806	ENSMICG00000007885	QARS	100	93.806	Microcebus_murinus
ENSSBOG00000025786	-	100	90.968	ENSMOCG00000019363	Qars	100	90.968	Microtus_ochrogaster
ENSSBOG00000025786	-	99	70.619	ENSMMOG00000020916	qars	99	70.619	Mola_mola
ENSSBOG00000025786	-	99	81.630	ENSMODG00000013321	QARS	99	81.630	Monodelphis_domestica
ENSSBOG00000025786	-	99	73.997	ENSMALG00000020739	qars	99	73.997	Monopterus_albus
ENSSBOG00000025786	-	100	90.194	MGP_CAROLIEiJ_G0032693	Qars	99	91.722	Mus_caroli
ENSSBOG00000025786	-	100	90.065	ENSMUSG00000032604	Qars	100	90.065	Mus_musculus
ENSSBOG00000025786	-	100	90.581	MGP_PahariEiJ_G0015561	Qars	99	92.053	Mus_pahari
ENSSBOG00000025786	-	100	90.194	MGP_SPRETEiJ_G0033838	Qars	99	91.722	Mus_spretus
ENSSBOG00000025786	-	100	92.774	ENSMPUG00000014198	QARS	100	92.774	Mustela_putorius_furo
ENSSBOG00000025786	-	100	92.129	ENSMLUG00000013976	QARS	100	92.129	Myotis_lucifugus
ENSSBOG00000025786	-	100	91.744	ENSNGAG00000019897	Qars	100	91.744	Nannospalax_galili
ENSSBOG00000025786	-	99	74.289	ENSNBRG00000018005	qars	99	74.289	Neolamprologus_brichardi
ENSSBOG00000025786	-	79	97.899	ENSNLEG00000006772	-	97	97.899	Nomascus_leucogenys
ENSSBOG00000025786	-	95	81.793	ENSMEUG00000006894	QARS	100	81.793	Notamacropus_eugenii
ENSSBOG00000025786	-	54	92.289	ENSOPRG00000006256	-	100	92.289	Ochotona_princeps
ENSSBOG00000025786	-	100	90.968	ENSODEG00000018381	-	100	90.968	Octodon_degus
ENSSBOG00000025786	-	99	88.282	ENSODEG00000001143	-	99	88.391	Octodon_degus
ENSSBOG00000025786	-	99	74.935	ENSONIG00000017262	qars	99	74.935	Oreochromis_niloticus
ENSSBOG00000025786	-	81	82.540	ENSOANG00000014118	QARS	100	82.540	Ornithorhynchus_anatinus
ENSSBOG00000025786	-	100	93.041	ENSOCUG00000005082	QARS	100	93.041	Oryctolagus_cuniculus
ENSSBOG00000025786	-	99	73.446	ENSORLG00000010737	qars	99	73.446	Oryzias_latipes
ENSSBOG00000025786	-	99	73.316	ENSORLG00020020742	qars	99	73.316	Oryzias_latipes_hni
ENSSBOG00000025786	-	99	73.575	ENSORLG00015000737	qars	99	73.575	Oryzias_latipes_hsok
ENSSBOG00000025786	-	99	73.969	ENSOMEG00000009629	qars	99	73.575	Oryzias_melastigma
ENSSBOG00000025786	-	100	77.032	ENSOGAG00000003954	QARS	100	77.032	Otolemur_garnettii
ENSSBOG00000025786	-	100	92.516	ENSOARG00000015195	QARS	100	92.516	Ovis_aries
ENSSBOG00000025786	-	100	93.677	ENSPPRG00000005221	QARS	100	93.677	Panthera_pardus
ENSSBOG00000025786	-	100	93.677	ENSPTIG00000017922	QARS	100	93.677	Panthera_tigris_altaica
ENSSBOG00000025786	-	100	96.671	ENSPTRG00000014910	QARS	100	96.671	Pan_troglodytes
ENSSBOG00000025786	-	100	95.871	ENSPANG00000016987	QARS	100	95.871	Papio_anubis
ENSSBOG00000025786	-	99	71.105	ENSPMGG00000012803	qars	99	70.356	Periophthalmus_magnuspinnatus
ENSSBOG00000025786	-	100	91.613	ENSPEMG00000017730	Qars	100	91.613	Peromyscus_maniculatus_bairdii
ENSSBOG00000025786	-	98	81.423	ENSPCIG00000018726	QARS	97	81.423	Phascolarctos_cinereus
ENSSBOG00000025786	-	99	73.454	ENSPFOG00000012143	qars	99	73.454	Poecilia_formosa
ENSSBOG00000025786	-	99	73.806	ENSPLAG00000012885	qars	99	73.806	Poecilia_latipinna
ENSSBOG00000025786	-	99	73.834	ENSPMEG00000009343	qars	99	73.834	Poecilia_mexicana
ENSSBOG00000025786	-	99	70.722	ENSPREG00000016290	qars	99	70.722	Poecilia_reticulata
ENSSBOG00000025786	-	100	97.032	ENSPPYG00000013882	QARS	98	97.032	Pongo_abelii
ENSSBOG00000025786	-	63	92.941	ENSPCAG00000011911	-	61	92.941	Procavia_capensis
ENSSBOG00000025786	-	100	93.419	ENSPCOG00000022610	QARS	100	93.419	Propithecus_coquereli
ENSSBOG00000025786	-	100	90.452	ENSPVAG00000008720	QARS	100	90.452	Pteropus_vampyrus
ENSSBOG00000025786	-	99	73.773	ENSPNYG00000005285	qars	99	73.773	Pundamilia_nyererei
ENSSBOG00000025786	-	99	76.295	ENSPNAG00000029441	qars	99	76.295	Pygocentrus_nattereri
ENSSBOG00000025786	-	100	96.774	ENSRNOG00000054139	LOC100911132	100	96.774	Rattus_norvegicus
ENSSBOG00000025786	-	100	92.516	ENSRNOG00000060912	Qars	100	92.516	Rattus_norvegicus
ENSSBOG00000025786	-	100	96.129	ENSRBIG00000030327	QARS	100	96.129	Rhinopithecus_bieti
ENSSBOG00000025786	-	100	96.000	ENSRROG00000034983	QARS	100	96.000	Rhinopithecus_roxellana
ENSSBOG00000025786	-	95	82.249	ENSSHAG00000015068	QARS	100	82.249	Sarcophilus_harrisii
ENSSBOG00000025786	-	99	73.800	ENSSFOG00015015812	qars	99	73.800	Scleropages_formosus
ENSSBOG00000025786	-	99	72.897	ENSSMAG00000011758	qars	99	72.897	Scophthalmus_maximus
ENSSBOG00000025786	-	99	73.773	ENSSDUG00000014004	qars	99	73.773	Seriola_dumerili
ENSSBOG00000025786	-	99	73.643	ENSSLDG00000005475	qars	99	73.643	Seriola_lalandi_dorsalis
ENSSBOG00000025786	-	80	90.909	ENSSARG00000000062	QARS	77	90.909	Sorex_araneus
ENSSBOG00000025786	-	95	77.266	ENSSPUG00000010197	QARS	95	77.266	Sphenodon_punctatus
ENSSBOG00000025786	-	99	74.644	ENSSPAG00000010803	qars	99	74.515	Stegastes_partitus
ENSSBOG00000025786	-	100	93.032	ENSSSCG00000032031	QARS	100	93.032	Sus_scrofa
ENSSBOG00000025786	-	94	80.000	ENSTGUG00000008887	QARS	99	80.000	Taeniopygia_guttata
ENSSBOG00000025786	-	99	72.668	ENSTRUG00000021416	qars	99	72.668	Takifugu_rubripes
ENSSBOG00000025786	-	99	62.596	ENSTNIG00000017913	qars	99	62.596	Tetraodon_nigroviridis
ENSSBOG00000025786	-	92	89.394	ENSTBEG00000006109	QARS	90	89.394	Tupaia_belangeri
ENSSBOG00000025786	-	100	92.903	ENSTTRG00000017352	QARS	100	92.903	Tursiops_truncatus
ENSSBOG00000025786	-	98	92.378	ENSUAMG00000010069	QARS	92	92.378	Ursus_americanus
ENSSBOG00000025786	-	100	89.272	ENSUMAG00000023208	QARS	100	89.272	Ursus_maritimus
ENSSBOG00000025786	-	78	93.665	ENSVPAG00000009664	QARS	80	93.665	Vicugna_pacos
ENSSBOG00000025786	-	100	89.419	ENSVVUG00000029158	QARS	100	89.419	Vulpes_vulpes
ENSSBOG00000025786	-	99	76.357	ENSXETG00000009351	qars	99	76.357	Xenopus_tropicalis
ENSSBOG00000025786	-	99	73.768	ENSXCOG00000005214	qars	99	73.768	Xiphophorus_couchianus
ENSSBOG00000025786	-	99	73.643	ENSXMAG00000015931	qars	99	73.643	Xiphophorus_maculatus