EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000025998 (Gene tree)
Gene ID: 101049892
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 35160 bases
Position: chrJH378337.1:16409-51568
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000018763	RNA_pol_Rpb4	PF03874.16	3.3e-31	1	1
ENSSBOP00000018766	RNA_pol_Rpb4	PF03874.16	5.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000035579	-	438	-	ENSSBOP00000018763	145 (aa)	-	A0A2K6TGH9
ENSSBOT00000035582	-	339	XM_010332799	ENSSBOP00000018766	112 (aa)	XP_010331101	A0A2K6TGK6

Gene Model

Click here to download ENSSBOG00000025998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000025998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000025998	-	100	95.172	ENSSBOG00000011617	-	98	95.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000025998	-	100	95.862	ENSG00000241258	CRCP	98	95.862	Homo_sapiens
ENSSBOG00000025998	-	97	73.759	ENSAPOG00000016572	crcp	96	74.074	Acanthochromis_polyacanthus
ENSSBOG00000025998	-	100	95.172	ENSAMEG00000015954	CRCP	99	95.172	Ailuropoda_melanoleuca
ENSSBOG00000025998	-	95	71.739	ENSACIG00000020248	crcp	91	71.739	Amphilophus_citrinellus
ENSSBOG00000025998	-	97	73.759	ENSAOCG00000021389	crcp	95	73.759	Amphiprion_ocellaris
ENSSBOG00000025998	-	97	62.411	ENSAPEG00000016688	crcp	94	62.411	Amphiprion_percula
ENSSBOG00000025998	-	97	73.050	ENSATEG00000008670	crcp	95	73.050	Anabas_testudineus
ENSSBOG00000025998	-	100	98.621	ENSANAG00000032466	CRCP	98	98.621	Aotus_nancymaae
ENSSBOG00000025998	-	88	80.469	ENSACLG00000007588	crcp	87	80.469	Astatotilapia_calliptera
ENSSBOG00000025998	-	89	75.194	ENSAMXG00000043940	crcp	88	75.194	Astyanax_mexicanus
ENSSBOG00000025998	-	100	93.103	ENSBTAG00000037489	CRCP	98	93.103	Bos_taurus
ENSSBOG00000025998	-	100	91.034	ENSBTAG00000049986	-	98	91.034	Bos_taurus
ENSSBOG00000025998	-	82	40.833	WBGene00044924	M106.7	91	40.000	Caenorhabditis_elegans
ENSSBOG00000025998	-	100	96.552	ENSCJAG00000004225	CRCP	98	96.552	Callithrix_jacchus
ENSSBOG00000025998	-	100	95.172	ENSCAFG00000010756	CRCP	98	95.172	Canis_familiaris
ENSSBOG00000025998	-	100	95.862	ENSCAFG00020005322	CRCP	98	95.862	Canis_lupus_dingo
ENSSBOG00000025998	-	97	86.525	ENSCHIG00000015299	CRCP	90	86.525	Capra_hircus
ENSSBOG00000025998	-	100	93.793	ENSTSYG00000005933	CRCP	98	93.793	Carlito_syrichta
ENSSBOG00000025998	-	61	95.588	ENSCCAG00000012341	-	96	95.588	Cebus_capucinus
ENSSBOG00000025998	-	100	95.536	ENSCATG00000036957	CRCP	97	95.536	Cercocebus_atys
ENSSBOG00000025998	-	100	84.247	ENSCLAG00000007249	CRCP	98	86.301	Chinchilla_lanigera
ENSSBOG00000025998	-	92	96.992	ENSCSAG00000018288	CRCP	75	96.992	Chlorocebus_sabaeus
ENSSBOG00000025998	-	99	78.472	ENSCPBG00000014854	CRCP	97	78.472	Chrysemys_picta_bellii
ENSSBOG00000025998	-	77	58.140	ENSCING00000003588	cgrp-rcp	93	55.085	Ciona_intestinalis
ENSSBOG00000025998	-	100	97.931	ENSCANG00000038796	CRCP	98	97.931	Colobus_angolensis_palliatus
ENSSBOG00000025998	-	100	88.276	ENSCGRG00001009376	Crcp	98	88.276	Cricetulus_griseus_chok1gshd
ENSSBOG00000025998	-	100	87.586	ENSCGRG00000003194	Crcp	98	87.586	Cricetulus_griseus_crigri
ENSSBOG00000025998	-	92	72.932	ENSCSEG00000018814	crcp	90	72.932	Cynoglossus_semilaevis
ENSSBOG00000025998	-	97	69.504	ENSCVAG00000013625	crcp	95	69.504	Cyprinodon_variegatus
ENSSBOG00000025998	-	97	74.286	ENSDARG00000069373	crcp	96	74.286	Danio_rerio
ENSSBOG00000025998	-	100	91.724	ENSDNOG00000002751	CRCP	98	91.724	Dasypus_novemcinctus
ENSSBOG00000025998	-	100	89.655	ENSDORG00000013712	Crcp	100	89.655	Dipodomys_ordii
ENSSBOG00000025998	-	100	94.483	ENSEASG00005008835	CRCP	98	94.483	Equus_asinus_asinus
ENSSBOG00000025998	-	100	95.172	ENSECAG00000011060	CRCP	98	95.172	Equus_caballus
ENSSBOG00000025998	-	90	85.149	ENSEEUG00000005796	-	100	84.091	Erinaceus_europaeus
ENSSBOG00000025998	-	88	78.906	ENSELUG00000019916	crcp	86	78.906	Esox_lucius
ENSSBOG00000025998	-	100	93.793	ENSFCAG00000022099	CRCP	98	93.793	Felis_catus
ENSSBOG00000025998	-	99	79.720	ENSFALG00000006720	CRCP	97	79.720	Ficedula_albicollis
ENSSBOG00000025998	-	100	82.192	ENSFDAG00000014337	CRCP	98	84.247	Fukomys_damarensis
ENSSBOG00000025998	-	97	72.340	ENSFHEG00000021283	crcp	95	72.340	Fundulus_heteroclitus
ENSSBOG00000025998	-	94	77.206	ENSGMOG00000011351	crcp	97	77.206	Gadus_morhua
ENSSBOG00000025998	-	90	86.154	ENSGALG00000002587	CRCP	90	86.154	Gallus_gallus
ENSSBOG00000025998	-	89	75.969	ENSGAFG00000002307	crcp	95	72.340	Gambusia_affinis
ENSSBOG00000025998	-	88	78.906	ENSGACG00000020468	crcp	90	78.906	Gasterosteus_aculeatus
ENSSBOG00000025998	-	99	80.000	ENSGAGG00000011445	CRCP	94	79.167	Gopherus_agassizii
ENSSBOG00000025998	-	100	95.862	ENSGGOG00000039733	CRCP	98	95.862	Gorilla_gorilla
ENSSBOG00000025998	-	88	79.688	ENSHBUG00000004779	crcp	87	79.688	Haplochromis_burtoni
ENSSBOG00000025998	-	100	80.822	ENSHGLG00000011719	CRCP	98	82.877	Heterocephalus_glaber_female
ENSSBOG00000025998	-	100	78.912	ENSHGLG00100005071	CRCP	100	78.912	Heterocephalus_glaber_male
ENSSBOG00000025998	-	96	71.942	ENSHCOG00000009105	crcp	97	71.942	Hippocampus_comes
ENSSBOG00000025998	-	88	78.125	ENSIPUG00000024520	CRCP	88	78.125	Ictalurus_punctatus
ENSSBOG00000025998	-	92	94.737	ENSSTOG00000008885	CRCP	100	94.737	Ictidomys_tridecemlineatus
ENSSBOG00000025998	-	100	91.034	ENSJJAG00000016893	Crcp	98	91.034	Jaculus_jaculus
ENSSBOG00000025998	-	86	78.400	ENSKMAG00000007300	crcp	87	78.125	Kryptolebias_marmoratus
ENSSBOG00000025998	-	97	70.213	ENSLBEG00000000804	crcp	94	70.213	Labrus_bergylta
ENSSBOG00000025998	-	89	80.620	ENSLOCG00000005302	crcp	86	82.540	Lepisosteus_oculatus
ENSSBOG00000025998	-	100	91.724	ENSLAFG00000027377	CRCP	100	91.724	Loxodonta_africana
ENSSBOG00000025998	-	100	96.552	ENSMFAG00000037828	CRCP	98	96.552	Macaca_fascicularis
ENSSBOG00000025998	-	100	96.552	ENSMMUG00000014524	CRCP	98	96.552	Macaca_mulatta
ENSSBOG00000025998	-	66	86.458	ENSMNEG00000030945	CRCP	94	86.458	Macaca_nemestrina
ENSSBOG00000025998	-	100	96.552	ENSMLEG00000043904	CRCP	98	96.552	Mandrillus_leucophaeus
ENSSBOG00000025998	-	88	79.688	ENSMAMG00000021168	crcp	88	79.688	Mastacembelus_armatus
ENSSBOG00000025998	-	88	80.469	ENSMZEG00005025255	crcp	87	80.469	Maylandia_zebra
ENSSBOG00000025998	-	90	86.154	ENSMGAG00000004593	CRCP	97	81.560	Meleagris_gallopavo
ENSSBOG00000025998	-	58	90.476	ENSMAUG00000018383	Crcp	100	90.476	Mesocricetus_auratus
ENSSBOG00000025998	-	100	95.862	ENSMICG00000004191	CRCP	98	95.862	Microcebus_murinus
ENSSBOG00000025998	-	100	88.276	ENSMOCG00000002717	Crcp	98	88.276	Microtus_ochrogaster
ENSSBOG00000025998	-	95	76.087	ENSMMOG00000011491	crcp	87	76.087	Mola_mola
ENSSBOG00000025998	-	97	72.340	ENSMALG00000020309	crcp	96	72.340	Monopterus_albus
ENSSBOG00000025998	-	100	88.276	MGP_CAROLIEiJ_G0027795	Crcp	98	88.276	Mus_caroli
ENSSBOG00000025998	-	100	88.276	ENSMUSG00000025532	Crcp	98	88.276	Mus_musculus
ENSSBOG00000025998	-	100	88.276	MGP_PahariEiJ_G0024389	Crcp	98	88.276	Mus_pahari
ENSSBOG00000025998	-	100	89.655	MGP_SPRETEiJ_G0028793	Crcp	98	89.655	Mus_spretus
ENSSBOG00000025998	-	98	92.958	ENSMPUG00000016198	CRCP	98	92.958	Mustela_putorius_furo
ENSSBOG00000025998	-	100	93.103	ENSMLUG00000012217	CRCP	100	93.103	Myotis_lucifugus
ENSSBOG00000025998	-	100	90.345	ENSNGAG00000021687	Crcp	98	90.345	Nannospalax_galili
ENSSBOG00000025998	-	81	80.342	ENSNBRG00000003094	crcp	58	80.342	Neolamprologus_brichardi
ENSSBOG00000025998	-	100	95.862	ENSNLEG00000001437	CRCP	98	95.862	Nomascus_leucogenys
ENSSBOG00000025998	-	100	83.562	ENSODEG00000014255	-	100	85.616	Octodon_degus
ENSSBOG00000025998	-	95	61.594	ENSODEG00000003432	-	98	61.151	Octodon_degus
ENSSBOG00000025998	-	100	82.877	ENSODEG00000020033	-	98	84.932	Octodon_degus
ENSSBOG00000025998	-	97	64.336	ENSONIG00000008677	crcp	95	64.336	Oreochromis_niloticus
ENSSBOG00000025998	-	73	85.981	ENSOANG00000009026	-	72	90.816	Ornithorhynchus_anatinus
ENSSBOG00000025998	-	100	92.414	ENSOCUG00000014827	CRCP	98	92.414	Oryctolagus_cuniculus
ENSSBOG00000025998	-	88	77.344	ENSORLG00000028784	crcp	87	77.344	Oryzias_latipes
ENSSBOG00000025998	-	88	76.562	ENSORLG00020017373	crcp	88	77.049	Oryzias_latipes_hni
ENSSBOG00000025998	-	88	76.562	ENSORLG00015001859	crcp	87	76.562	Oryzias_latipes_hsok
ENSSBOG00000025998	-	88	77.344	ENSOMEG00000008006	crcp	87	77.344	Oryzias_melastigma
ENSSBOG00000025998	-	100	81.507	ENSOGAG00000001914	CRCP	100	81.507	Otolemur_garnettii
ENSSBOG00000025998	-	88	97.638	ENSOARG00000010380	-	51	97.638	Ovis_aries
ENSSBOG00000025998	-	100	95.862	ENSPPAG00000030427	CRCP	98	95.862	Pan_paniscus
ENSSBOG00000025998	-	100	93.793	ENSPPRG00000012841	CRCP	98	93.793	Panthera_pardus
ENSSBOG00000025998	-	100	89.116	ENSPTIG00000009335	CRCP	100	89.116	Panthera_tigris_altaica
ENSSBOG00000025998	-	100	95.862	ENSPTRG00000019246	-	98	95.862	Pan_troglodytes
ENSSBOG00000025998	-	100	95.862	ENSPTRG00000046581	CRCP	98	95.862	Pan_troglodytes
ENSSBOG00000025998	-	100	96.552	ENSPANG00000023118	CRCP	98	96.552	Papio_anubis
ENSSBOG00000025998	-	86	80.800	ENSPKIG00000011467	crcp	85	80.800	Paramormyrops_kingsleyae
ENSSBOG00000025998	-	98	77.465	ENSPSIG00000008385	CRCP	94	77.465	Pelodiscus_sinensis
ENSSBOG00000025998	-	99	72.727	ENSPMGG00000005986	crcp	96	72.727	Periophthalmus_magnuspinnatus
ENSSBOG00000025998	-	100	88.276	ENSPEMG00000010829	Crcp	98	88.276	Peromyscus_maniculatus_bairdii
ENSSBOG00000025998	-	88	76.562	ENSPFOG00000008626	crcp	95	71.631	Poecilia_formosa
ENSSBOG00000025998	-	88	76.562	ENSPLAG00000005996	crcp	95	71.631	Poecilia_latipinna
ENSSBOG00000025998	-	88	76.562	ENSPMEG00000020035	crcp	95	71.631	Poecilia_mexicana
ENSSBOG00000025998	-	67	79.381	ENSPREG00000008487	crcp	72	79.381	Poecilia_reticulata
ENSSBOG00000025998	-	100	95.862	ENSPPYG00000017525	CRCP	98	95.862	Pongo_abelii
ENSSBOG00000025998	-	88	79.688	ENSPNYG00000016988	crcp	87	79.688	Pundamilia_nyererei
ENSSBOG00000025998	-	97	74.286	ENSPNAG00000004712	crcp	94	74.286	Pygocentrus_nattereri
ENSSBOG00000025998	-	100	87.586	ENSRNOG00000000901	Crcp	99	87.586	Rattus_norvegicus
ENSSBOG00000025998	-	100	97.931	ENSRBIG00000039256	CRCP	100	97.321	Rhinopithecus_bieti
ENSSBOG00000025998	-	100	97.931	ENSRROG00000037982	CRCP	100	97.321	Rhinopithecus_roxellana
ENSSBOG00000025998	-	79	30.263	YJL011C	RPC17	94	30.263	Saccharomyces_cerevisiae
ENSSBOG00000025998	-	99	84.722	ENSSHAG00000007315	CRCP	97	84.722	Sarcophilus_harrisii
ENSSBOG00000025998	-	98	73.239	ENSSFOG00015013799	crcp	95	73.239	Scleropages_formosus
ENSSBOG00000025998	-	86	78.400	ENSSMAG00000019004	crcp	87	78.125	Scophthalmus_maximus
ENSSBOG00000025998	-	88	81.250	ENSSDUG00000019628	crcp	85	81.197	Seriola_dumerili
ENSSBOG00000025998	-	88	80.469	ENSSLDG00000016367	crcp	87	80.469	Seriola_lalandi_dorsalis
ENSSBOG00000025998	-	92	80.451	ENSSPUG00000002367	CRCP	91	80.451	Sphenodon_punctatus
ENSSBOG00000025998	-	88	78.906	ENSSPAG00000010443	crcp	88	79.508	Stegastes_partitus
ENSSBOG00000025998	-	100	92.414	ENSSSCG00000032119	-	98	92.414	Sus_scrofa
ENSSBOG00000025998	-	88	67.188	ENSSSCG00000034001	-	95	67.188	Sus_scrofa
ENSSBOG00000025998	-	75	69.725	ENSSSCG00000039653	-	82	76.289	Sus_scrofa
ENSSBOG00000025998	-	88	69.531	ENSSSCG00000031397	-	96	69.531	Sus_scrofa
ENSSBOG00000025998	-	66	88.542	ENSTGUG00000005354	CRCP	100	88.542	Taeniopygia_guttata
ENSSBOG00000025998	-	98	72.535	ENSTRUG00000025161	crcp	95	72.535	Takifugu_rubripes
ENSSBOG00000025998	-	98	72.222	ENSTNIG00000016137	crcp	95	72.222	Tetraodon_nigroviridis
ENSSBOG00000025998	-	100	93.103	ENSTTRG00000002888	CRCP	98	93.103	Tursiops_truncatus
ENSSBOG00000025998	-	100	93.793	ENSUMAG00000015406	CRCP	98	93.793	Ursus_maritimus
ENSSBOG00000025998	-	100	95.862	ENSVPAG00000006107	CRCP	100	95.862	Vicugna_pacos
ENSSBOG00000025998	-	100	95.862	ENSVVUG00000016521	CRCP	98	95.862	Vulpes_vulpes
ENSSBOG00000025998	-	90	78.462	ENSXETG00000025028	crcp	91	77.863	Xenopus_tropicalis
ENSSBOG00000025998	-	92	68.421	ENSXCOG00000007013	crcp	84	68.421	Xiphophorus_couchianus
ENSSBOG00000025998	-	87	76.190	ENSXMAG00000022222	crcp	95	70.922	Xiphophorus_maculatus