EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000026369 (Gene tree)
Gene ID: 101028742
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 61913 bases
Position: chrJH378181.1:10447276-10509188
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000019553	RTC	PF01137.21	8.9e-61	1	1
ENSSBOP00000019559	RTC	PF01137.21	8.3e-56	1	1
ENSSBOP00000019573	RTC	PF01137.21	2.7e-07	1	1
ENSSBOP00000019559	RTC_insert	PF05189.13	1.5e-36	1	1
ENSSBOP00000019553	RTC_insert	PF05189.13	1.5e-36	1	1
ENSSBOP00000019573	RTC_insert	PF05189.13	4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000036394	RCL1-203	1436	XM_010346184	ENSSBOP00000019573	187 (aa)	XP_010344486	A0A2K6TIU3
ENSSBOT00000036380	RCL1-202	1643	-	ENSSBOP00000019559	371 (aa)	-	A0A2K6TIS7
ENSSBOT00000036374	RCL1-201	3799	XM_003935669	ENSSBOP00000019553	373 (aa)	XP_003935718	A0A2K6TIS0

Gene Model

Click here to download ENSSBOG00000026369's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000026369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000026369	RCL1	100	99.196	ENSG00000120158	RCL1	100	99.196	Homo_sapiens
ENSSBOG00000026369	RCL1	97	81.967	ENSAPOG00000015666	rcl1	100	78.877	Acanthochromis_polyacanthus
ENSSBOG00000026369	RCL1	100	97.051	ENSAMEG00000002631	RCL1	100	97.051	Ailuropoda_melanoleuca
ENSSBOG00000026369	RCL1	97	83.060	ENSACIG00000021195	rcl1	99	79.459	Amphilophus_citrinellus
ENSSBOG00000026369	RCL1	100	78.342	ENSAOCG00000002223	rcl1	100	78.342	Amphiprion_ocellaris
ENSSBOG00000026369	RCL1	100	78.610	ENSAPEG00000006905	rcl1	100	78.610	Amphiprion_percula
ENSSBOG00000026369	RCL1	99	77.027	ENSATEG00000020026	rcl1	99	77.027	Anabas_testudineus
ENSSBOG00000026369	RCL1	97	86.813	ENSAPLG00000006031	RCL1	100	86.585	Anas_platyrhynchos
ENSSBOG00000026369	RCL1	100	84.987	ENSACAG00000003640	RCL1	100	84.987	Anolis_carolinensis
ENSSBOG00000026369	RCL1	100	98.123	ENSANAG00000037372	RCL1	100	98.123	Aotus_nancymaae
ENSSBOG00000026369	RCL1	97	82.514	ENSACLG00000021724	rcl1	99	78.919	Astatotilapia_calliptera
ENSSBOG00000026369	RCL1	97	80.328	ENSAMXG00000033394	rcl1	99	78.533	Astyanax_mexicanus
ENSSBOG00000026369	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSSBOG00000026369	RCL1	100	98.928	ENSCJAG00000011202	RCL1	100	98.928	Callithrix_jacchus
ENSSBOG00000026369	RCL1	100	95.979	ENSCAFG00000002091	RCL1	100	95.979	Canis_familiaris
ENSSBOG00000026369	RCL1	100	95.979	ENSCAFG00020000638	RCL1	78	95.979	Canis_lupus_dingo
ENSSBOG00000026369	RCL1	100	96.247	ENSCHIG00000012407	RCL1	100	96.247	Capra_hircus
ENSSBOG00000026369	RCL1	100	96.791	ENSTSYG00000009592	RCL1	100	96.791	Carlito_syrichta
ENSSBOG00000026369	RCL1	68	79.769	ENSCAPG00000013575	RCL1	100	79.769	Cavia_aperea
ENSSBOG00000026369	RCL1	100	96.515	ENSCPOG00000015354	RCL1	100	96.515	Cavia_porcellus
ENSSBOG00000026369	RCL1	100	98.930	ENSCCAG00000033505	RCL1	100	98.930	Cebus_capucinus
ENSSBOG00000026369	RCL1	100	98.930	ENSCATG00000034721	RCL1	100	98.930	Cercocebus_atys
ENSSBOG00000026369	RCL1	100	96.783	ENSCLAG00000007445	RCL1	100	96.783	Chinchilla_lanigera
ENSSBOG00000026369	RCL1	100	98.928	ENSCSAG00000008811	RCL1	100	98.928	Chlorocebus_sabaeus
ENSSBOG00000026369	RCL1	87	82.043	ENSCHOG00000007216	RCL1	100	82.043	Choloepus_hoffmanni
ENSSBOG00000026369	RCL1	100	88.740	ENSCPBG00000025481	RCL1	94	88.754	Chrysemys_picta_bellii
ENSSBOG00000026369	RCL1	98	58.919	ENSCING00000019565	-	98	58.919	Ciona_intestinalis
ENSSBOG00000026369	RCL1	85	30.503	ENSCING00000007875	-	84	30.818	Ciona_intestinalis
ENSSBOG00000026369	RCL1	85	30.818	ENSCSAVG00000007269	-	84	30.818	Ciona_savignyi
ENSSBOG00000026369	RCL1	100	98.928	ENSCANG00000027099	RCL1	100	98.928	Colobus_angolensis_palliatus
ENSSBOG00000026369	RCL1	100	95.710	ENSCGRG00001013748	Rcl1	100	95.710	Cricetulus_griseus_chok1gshd
ENSSBOG00000026369	RCL1	97	95.055	ENSCGRG00000005843	Rcl1	99	95.427	Cricetulus_griseus_crigri
ENSSBOG00000026369	RCL1	97	81.967	ENSCSEG00000000712	rcl1	97	79.459	Cynoglossus_semilaevis
ENSSBOG00000026369	RCL1	99	80.541	ENSCVAG00000011536	rcl1	99	80.541	Cyprinodon_variegatus
ENSSBOG00000026369	RCL1	97	80.874	ENSDARG00000038312	rcl1	100	76.567	Danio_rerio
ENSSBOG00000026369	RCL1	97	96.154	ENSDNOG00000019911	RCL1	100	96.279	Dasypus_novemcinctus
ENSSBOG00000026369	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSSBOG00000026369	RCL1	99	53.968	FBgn0020909	Rtc1	98	53.968	Drosophila_melanogaster
ENSSBOG00000026369	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSSBOG00000026369	RCL1	100	53.600	ENSEBUG00000016621	-	100	53.600	Eptatretus_burgeri
ENSSBOG00000026369	RCL1	100	97.051	ENSEASG00005010653	RCL1	100	97.051	Equus_asinus_asinus
ENSSBOG00000026369	RCL1	100	97.051	ENSECAG00000015973	RCL1	100	97.051	Equus_caballus
ENSSBOG00000026369	RCL1	100	81.501	ENSEEUG00000009801	RCL1	94	87.692	Erinaceus_europaeus
ENSSBOG00000026369	RCL1	100	75.936	ENSELUG00000007353	rcl1	100	75.936	Esox_lucius
ENSSBOG00000026369	RCL1	100	95.174	ENSFCAG00000014557	RCL1	100	95.174	Felis_catus
ENSSBOG00000026369	RCL1	97	86.264	ENSFALG00000010553	RCL1	94	82.254	Ficedula_albicollis
ENSSBOG00000026369	RCL1	97	95.055	ENSFDAG00000004209	RCL1	100	95.719	Fukomys_damarensis
ENSSBOG00000026369	RCL1	97	82.514	ENSFHEG00000011228	rcl1	99	80.000	Fundulus_heteroclitus
ENSSBOG00000026369	RCL1	97	80.874	ENSGMOG00000004677	rcl1	99	77.838	Gadus_morhua
ENSSBOG00000026369	RCL1	99	85.637	ENSGALG00000015024	RCL1	99	85.637	Gallus_gallus
ENSSBOG00000026369	RCL1	99	78.378	ENSGAFG00000007257	rcl1	99	78.378	Gambusia_affinis
ENSSBOG00000026369	RCL1	100	77.540	ENSGACG00000017474	rcl1	100	77.540	Gasterosteus_aculeatus
ENSSBOG00000026369	RCL1	100	89.276	ENSGAGG00000003689	RCL1	100	89.276	Gopherus_agassizii
ENSSBOG00000026369	RCL1	100	98.660	ENSGGOG00000015041	RCL1	100	98.660	Gorilla_gorilla
ENSSBOG00000026369	RCL1	97	83.060	ENSHBUG00000001393	rcl1	99	79.189	Haplochromis_burtoni
ENSSBOG00000026369	RCL1	97	86.813	ENSHGLG00000005368	-	100	80.429	Heterocephalus_glaber_female
ENSSBOG00000026369	RCL1	100	96.783	ENSHGLG00000016452	RCL1	100	96.783	Heterocephalus_glaber_female
ENSSBOG00000026369	RCL1	97	96.154	ENSHGLG00100008718	-	100	89.812	Heterocephalus_glaber_male
ENSSBOG00000026369	RCL1	98	85.870	ENSHGLG00100018010	-	100	81.501	Heterocephalus_glaber_male
ENSSBOG00000026369	RCL1	97	80.874	ENSHCOG00000020170	rcl1	99	78.378	Hippocampus_comes
ENSSBOG00000026369	RCL1	98	79.620	ENSIPUG00000018054	RCL1	99	79.620	Ictalurus_punctatus
ENSSBOG00000026369	RCL1	100	97.051	ENSSTOG00000000023	RCL1	100	97.051	Ictidomys_tridecemlineatus
ENSSBOG00000026369	RCL1	100	95.442	ENSJJAG00000022803	-	100	95.442	Jaculus_jaculus
ENSSBOG00000026369	RCL1	100	84.450	ENSJJAG00000015632	-	100	84.450	Jaculus_jaculus
ENSSBOG00000026369	RCL1	89	71.856	ENSJJAG00000000764	-	95	71.649	Jaculus_jaculus
ENSSBOG00000026369	RCL1	98	78.202	ENSKMAG00000011946	rcl1	99	78.202	Kryptolebias_marmoratus
ENSSBOG00000026369	RCL1	97	83.607	ENSLBEG00000003957	rcl1	99	76.486	Labrus_bergylta
ENSSBOG00000026369	RCL1	91	81.121	ENSLACG00000004594	RCL1	98	85.174	Latimeria_chalumnae
ENSSBOG00000026369	RCL1	100	81.769	ENSLOCG00000010148	rcl1	98	81.769	Lepisosteus_oculatus
ENSSBOG00000026369	RCL1	100	93.298	ENSLAFG00000017495	RCL1	100	93.298	Loxodonta_africana
ENSSBOG00000026369	RCL1	100	98.928	ENSMFAG00000037906	RCL1	100	98.928	Macaca_fascicularis
ENSSBOG00000026369	RCL1	100	98.930	ENSMNEG00000012288	RCL1	100	98.930	Macaca_nemestrina
ENSSBOG00000026369	RCL1	100	98.928	ENSMLEG00000043088	RCL1	100	98.928	Mandrillus_leucophaeus
ENSSBOG00000026369	RCL1	97	81.421	ENSMAMG00000008311	rcl1	99	79.189	Mastacembelus_armatus
ENSSBOG00000026369	RCL1	97	82.514	ENSMZEG00005017292	rcl1	99	78.919	Maylandia_zebra
ENSSBOG00000026369	RCL1	98	85.326	ENSMGAG00000002245	RCL1	97	83.491	Meleagris_gallopavo
ENSSBOG00000026369	RCL1	97	95.604	ENSMAUG00000008922	Rcl1	97	95.673	Mesocricetus_auratus
ENSSBOG00000026369	RCL1	100	96.247	ENSMICG00000015562	RCL1	100	96.247	Microcebus_murinus
ENSSBOG00000026369	RCL1	100	96.783	ENSMOCG00000012145	Rcl1	100	96.783	Microtus_ochrogaster
ENSSBOG00000026369	RCL1	99	76.011	ENSMMOG00000021264	rcl1	99	76.011	Mola_mola
ENSSBOG00000026369	RCL1	95	94.085	ENSMODG00000015377	RCL1	94	94.085	Monodelphis_domestica
ENSSBOG00000026369	RCL1	97	80.328	ENSMALG00000018618	rcl1	99	77.838	Monopterus_albus
ENSSBOG00000026369	RCL1	100	96.515	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.515	Mus_caroli
ENSSBOG00000026369	RCL1	100	96.515	ENSMUSG00000024785	Rcl1	100	96.515	Mus_musculus
ENSSBOG00000026369	RCL1	100	95.979	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSSBOG00000026369	RCL1	100	95.710	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSSBOG00000026369	RCL1	100	95.979	ENSMPUG00000004998	RCL1	100	95.979	Mustela_putorius_furo
ENSSBOG00000026369	RCL1	100	96.515	ENSMLUG00000009654	RCL1	100	96.515	Myotis_lucifugus
ENSSBOG00000026369	RCL1	100	96.783	ENSNGAG00000015327	Rcl1	100	96.783	Nannospalax_galili
ENSSBOG00000026369	RCL1	97	82.514	ENSNBRG00000019854	rcl1	96	74.581	Neolamprologus_brichardi
ENSSBOG00000026369	RCL1	100	95.979	ENSNLEG00000008891	RCL1	100	95.979	Nomascus_leucogenys
ENSSBOG00000026369	RCL1	97	93.407	ENSMEUG00000007653	RCL1	100	87.399	Notamacropus_eugenii
ENSSBOG00000026369	RCL1	100	95.979	ENSOPRG00000010965	RCL1	100	95.979	Ochotona_princeps
ENSSBOG00000026369	RCL1	98	95.652	ENSODEG00000004151	RCL1	96	80.793	Octodon_degus
ENSSBOG00000026369	RCL1	97	82.514	ENSONIG00000003871	rcl1	99	78.919	Oreochromis_niloticus
ENSSBOG00000026369	RCL1	96	88.827	ENSOANG00000013193	-	100	87.747	Ornithorhynchus_anatinus
ENSSBOG00000026369	RCL1	100	97.855	ENSOCUG00000008161	RCL1	100	97.855	Oryctolagus_cuniculus
ENSSBOG00000026369	RCL1	100	76.471	ENSORLG00000010443	rcl1	100	76.471	Oryzias_latipes
ENSSBOG00000026369	RCL1	100	76.471	ENSORLG00020012211	rcl1	100	76.471	Oryzias_latipes_hni
ENSSBOG00000026369	RCL1	97	79.235	ENSORLG00015001122	rcl1	100	76.203	Oryzias_latipes_hsok
ENSSBOG00000026369	RCL1	100	78.075	ENSOMEG00000022976	rcl1	88	78.075	Oryzias_melastigma
ENSSBOG00000026369	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSSBOG00000026369	RCL1	100	96.515	ENSOARG00000013463	RCL1	100	96.515	Ovis_aries
ENSSBOG00000026369	RCL1	100	98.928	ENSPPAG00000037958	RCL1	100	98.928	Pan_paniscus
ENSSBOG00000026369	RCL1	100	94.370	ENSPPRG00000022645	RCL1	100	94.370	Panthera_pardus
ENSSBOG00000026369	RCL1	97	94.505	ENSPTIG00000019031	RCL1	97	94.231	Panthera_tigris_altaica
ENSSBOG00000026369	RCL1	100	98.930	ENSPTRG00000020743	RCL1	100	98.930	Pan_troglodytes
ENSSBOG00000026369	RCL1	100	98.928	ENSPANG00000025151	RCL1	100	98.928	Papio_anubis
ENSSBOG00000026369	RCL1	97	82.514	ENSPKIG00000021022	rcl1	100	78.075	Paramormyrops_kingsleyae
ENSSBOG00000026369	RCL1	97	89.560	ENSPSIG00000012302	RCL1	100	89.024	Pelodiscus_sinensis
ENSSBOG00000026369	RCL1	100	76.738	ENSPMGG00000024007	rcl1	100	76.738	Periophthalmus_magnuspinnatus
ENSSBOG00000026369	RCL1	100	96.783	ENSPEMG00000023275	Rcl1	100	96.783	Peromyscus_maniculatus_bairdii
ENSSBOG00000026369	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSSBOG00000026369	RCL1	95	69.101	ENSPMAG00000005419	-	95	69.101	Petromyzon_marinus
ENSSBOG00000026369	RCL1	100	94.370	ENSPCIG00000000188	RCL1	100	94.370	Phascolarctos_cinereus
ENSSBOG00000026369	RCL1	99	79.189	ENSPFOG00000019682	rcl1	99	79.189	Poecilia_formosa
ENSSBOG00000026369	RCL1	99	79.189	ENSPLAG00000022354	rcl1	99	79.189	Poecilia_latipinna
ENSSBOG00000026369	RCL1	99	79.189	ENSPMEG00000008131	rcl1	99	79.189	Poecilia_mexicana
ENSSBOG00000026369	RCL1	99	78.919	ENSPREG00000008032	rcl1	99	78.919	Poecilia_reticulata
ENSSBOG00000026369	RCL1	100	98.928	ENSPPYG00000019244	RCL1	100	98.928	Pongo_abelii
ENSSBOG00000026369	RCL1	100	86.059	ENSPCAG00000001440	RCL1	100	86.059	Procavia_capensis
ENSSBOG00000026369	RCL1	100	97.861	ENSPCOG00000009611	RCL1	100	97.861	Propithecus_coquereli
ENSSBOG00000026369	RCL1	100	96.783	ENSPVAG00000015752	RCL1	100	96.783	Pteropus_vampyrus
ENSSBOG00000026369	RCL1	97	82.514	ENSPNYG00000012910	rcl1	99	78.919	Pundamilia_nyererei
ENSSBOG00000026369	RCL1	97	82.514	ENSPNAG00000028307	rcl1	92	78.552	Pygocentrus_nattereri
ENSSBOG00000026369	RCL1	100	96.247	ENSRNOG00000015491	Rcl1	100	96.247	Rattus_norvegicus
ENSSBOG00000026369	RCL1	100	98.660	ENSRBIG00000035818	RCL1	100	98.660	Rhinopithecus_bieti
ENSSBOG00000026369	RCL1	100	98.930	ENSRROG00000029781	RCL1	100	98.930	Rhinopithecus_roxellana
ENSSBOG00000026369	RCL1	98	36.486	YOL010W	-	97	36.486	Saccharomyces_cerevisiae
ENSSBOG00000026369	RCL1	97	92.857	ENSSHAG00000014086	RCL1	100	92.727	Sarcophilus_harrisii
ENSSBOG00000026369	RCL1	97	81.421	ENSSFOG00015023020	rcl1	100	78.342	Scleropages_formosus
ENSSBOG00000026369	RCL1	99	79.189	ENSSMAG00000019751	rcl1	85	79.189	Scophthalmus_maximus
ENSSBOG00000026369	RCL1	100	78.075	ENSSDUG00000006349	rcl1	100	78.075	Seriola_dumerili
ENSSBOG00000026369	RCL1	97	81.421	ENSSLDG00000022076	rcl1	100	78.342	Seriola_lalandi_dorsalis
ENSSBOG00000026369	RCL1	100	95.979	ENSSARG00000009260	RCL1	100	95.979	Sorex_araneus
ENSSBOG00000026369	RCL1	98	89.674	ENSSPUG00000016330	RCL1	100	87.668	Sphenodon_punctatus
ENSSBOG00000026369	RCL1	100	80.214	ENSSPAG00000018038	rcl1	100	80.214	Stegastes_partitus
ENSSBOG00000026369	RCL1	100	97.319	ENSSSCG00000005217	RCL1	83	97.319	Sus_scrofa
ENSSBOG00000026369	RCL1	100	84.533	ENSTGUG00000005138	RCL1	100	84.533	Taeniopygia_guttata
ENSSBOG00000026369	RCL1	97	80.874	ENSTRUG00000010493	rcl1	99	78.649	Takifugu_rubripes
ENSSBOG00000026369	RCL1	99	77.507	ENSTNIG00000013214	rcl1	99	77.507	Tetraodon_nigroviridis
ENSSBOG00000026369	RCL1	97	96.154	ENSTBEG00000016339	RCL1	100	90.080	Tupaia_belangeri
ENSSBOG00000026369	RCL1	100	96.247	ENSTTRG00000016525	RCL1	100	96.247	Tursiops_truncatus
ENSSBOG00000026369	RCL1	100	97.051	ENSUAMG00000005598	RCL1	100	97.051	Ursus_americanus
ENSSBOG00000026369	RCL1	97	96.703	ENSUMAG00000017890	RCL1	97	96.024	Ursus_maritimus
ENSSBOG00000026369	RCL1	97	97.802	ENSVPAG00000009188	RCL1	100	97.554	Vicugna_pacos
ENSSBOG00000026369	RCL1	97	96.703	ENSVVUG00000007304	RCL1	89	96.037	Vulpes_vulpes
ENSSBOG00000026369	RCL1	100	75.134	ENSXETG00000000592	rcl1	100	75.134	Xenopus_tropicalis
ENSSBOG00000026369	RCL1	99	79.189	ENSXCOG00000004922	rcl1	99	79.189	Xiphophorus_couchianus
ENSSBOG00000026369	RCL1	59	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSSBOG00000026369	RCL1	99	79.189	ENSXMAG00000022366	RCL1	99	79.189	Xiphophorus_maculatus