EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000026541 (Gene tree)
Gene ID: 101047705
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 16111 bases
Position: chrJH378160.1:5644965-5661075
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000019889	TRM13	PF05206.14	2.3e-92	1	1
ENSSBOP00000019897	zf-U11-48K	PF05253.12	7.2e-10	1	1
ENSSBOP00000019889	zf-U11-48K	PF05253.12	3.7e-09	1	1
ENSSBOP00000019897	zf-TRM13_CCCH	PF11722.8	4.7e-14	1	1
ENSSBOP00000019889	zf-TRM13_CCCH	PF11722.8	7.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000036713	TRMT13-201	3219	XM_003933263	ENSSBOP00000019889	481 (aa)	XP_003933312	A0A2K6TJP8
ENSSBOT00000036721	TRMT13-202	330	-	ENSSBOP00000019897	109 (aa)	-	A0A2K6TJS6

Gene Model

Click here to download ENSSBOG00000026541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000026541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000026541	TRMT13	100	98.165	ENSG00000122435	TRMT13	100	97.248	Homo_sapiens
ENSSBOG00000026541	TRMT13	86	60.638	ENSAPOG00000015131	trmt13	99	48.297	Acanthochromis_polyacanthus
ENSSBOG00000026541	TRMT13	100	92.661	ENSAMEG00000008917	TRMT13	100	90.229	Ailuropoda_melanoleuca
ENSSBOG00000026541	TRMT13	97	56.604	ENSACIG00000005804	trmt13	97	50.625	Amphilophus_citrinellus
ENSSBOG00000026541	TRMT13	87	60.000	ENSAOCG00000023585	trmt13	99	48.805	Amphiprion_ocellaris
ENSSBOG00000026541	TRMT13	87	60.000	ENSAPEG00000004025	trmt13	99	48.413	Amphiprion_percula
ENSSBOG00000026541	TRMT13	87	65.263	ENSATEG00000006597	trmt13	97	51.674	Anabas_testudineus
ENSSBOG00000026541	TRMT13	88	67.371	ENSAPLG00000014924	TRMT13	99	67.371	Anas_platyrhynchos
ENSSBOG00000026541	TRMT13	96	64.009	ENSACAG00000003498	TRMT13	98	64.009	Anolis_carolinensis
ENSSBOG00000026541	TRMT13	100	100.000	ENSANAG00000019525	TRMT13	100	100.000	Aotus_nancymaae
ENSSBOG00000026541	TRMT13	96	53.390	ENSACLG00000020018	trmt13	99	53.390	Astatotilapia_calliptera
ENSSBOG00000026541	TRMT13	95	55.246	ENSAMXG00000017963	trmt13	97	55.675	Astyanax_mexicanus
ENSSBOG00000026541	TRMT13	100	89.813	ENSBTAG00000015781	TRMT13	100	89.813	Bos_taurus
ENSSBOG00000026541	TRMT13	100	100.000	ENSCJAG00000000200	TRMT13	99	100.000	Callithrix_jacchus
ENSSBOG00000026541	TRMT13	65	91.083	ENSCAFG00000020021	TRMT13	99	91.083	Canis_familiaris
ENSSBOG00000026541	TRMT13	100	88.182	ENSCAFG00020011572	TRMT13	95	92.674	Canis_lupus_dingo
ENSSBOG00000026541	TRMT13	100	90.229	ENSCHIG00000015395	TRMT13	100	90.229	Capra_hircus
ENSSBOG00000026541	TRMT13	98	83.051	ENSTSYG00000010811	TRMT13	98	87.879	Carlito_syrichta
ENSSBOG00000026541	TRMT13	75	69.863	ENSCAPG00000009085	TRMT13	100	70.411	Cavia_aperea
ENSSBOG00000026541	TRMT13	100	89.397	ENSCPOG00000000694	TRMT13	100	89.397	Cavia_porcellus
ENSSBOG00000026541	TRMT13	100	99.083	ENSCCAG00000023772	TRMT13	100	99.083	Cebus_capucinus
ENSSBOG00000026541	TRMT13	100	98.165	ENSCATG00000033556	TRMT13	100	98.165	Cercocebus_atys
ENSSBOG00000026541	TRMT13	89	85.012	ENSCLAG00000008220	TRMT13	100	85.948	Chinchilla_lanigera
ENSSBOG00000026541	TRMT13	100	98.165	ENSCSAG00000001506	TRMT13	100	97.297	Chlorocebus_sabaeus
ENSSBOG00000026541	TRMT13	99	68.958	ENSCPBG00000026671	TRMT13	99	68.958	Chrysemys_picta_bellii
ENSSBOG00000026541	TRMT13	100	99.083	ENSCANG00000034659	TRMT13	100	99.083	Colobus_angolensis_palliatus
ENSSBOG00000026541	TRMT13	99	86.373	ENSCGRG00001021601	Trmt13	99	86.373	Cricetulus_griseus_chok1gshd
ENSSBOG00000026541	TRMT13	53	84.047	ENSCGRG00000000093	-	99	84.047	Cricetulus_griseus_crigri
ENSSBOG00000026541	TRMT13	98	48.203	ENSCSEG00000000591	trmt13	99	48.203	Cynoglossus_semilaevis
ENSSBOG00000026541	TRMT13	95	48.842	ENSCVAG00000017342	trmt13	93	50.420	Cyprinodon_variegatus
ENSSBOG00000026541	TRMT13	95	57.543	ENSDARG00000102846	trmt13	96	57.543	Danio_rerio
ENSSBOG00000026541	TRMT13	100	84.071	ENSDNOG00000001710	TRMT13	84	89.130	Dasypus_novemcinctus
ENSSBOG00000026541	TRMT13	100	88.991	ENSDORG00000015808	Trmt13	99	87.942	Dipodomys_ordii
ENSSBOG00000026541	TRMT13	95	30.498	FBgn0037435	CG18048	94	30.498	Drosophila_melanogaster
ENSSBOG00000026541	TRMT13	99	85.714	ENSETEG00000005819	TRMT13	99	75.157	Echinops_telfairi
ENSSBOG00000026541	TRMT13	95	45.376	ENSEBUG00000014444	trmt13	97	45.376	Eptatretus_burgeri
ENSSBOG00000026541	TRMT13	100	95.413	ENSEASG00005015918	TRMT13	100	92.100	Equus_asinus_asinus
ENSSBOG00000026541	TRMT13	100	95.413	ENSECAG00000022626	TRMT13	100	92.100	Equus_caballus
ENSSBOG00000026541	TRMT13	96	85.714	ENSEEUG00000000294	TRMT13	80	80.380	Erinaceus_europaeus
ENSSBOG00000026541	TRMT13	96	55.769	ENSELUG00000003803	trmt13	98	55.889	Esox_lucius
ENSSBOG00000026541	TRMT13	100	92.661	ENSFCAG00000030618	TRMT13	100	92.661	Felis_catus
ENSSBOG00000026541	TRMT13	100	66.055	ENSFALG00000002424	TRMT13	99	64.854	Ficedula_albicollis
ENSSBOG00000026541	TRMT13	100	90.826	ENSFDAG00000006342	TRMT13	99	90.546	Fukomys_damarensis
ENSSBOG00000026541	TRMT13	83	57.778	ENSFHEG00000022954	trmt13	97	51.372	Fundulus_heteroclitus
ENSSBOG00000026541	TRMT13	95	49.231	ENSGMOG00000013223	trmt13	100	49.670	Gadus_morhua
ENSSBOG00000026541	TRMT13	95	65.714	ENSGALG00000005290	TRMT13	98	64.756	Gallus_gallus
ENSSBOG00000026541	TRMT13	85	56.383	ENSGAFG00000001577	trmt13	81	51.613	Gambusia_affinis
ENSSBOG00000026541	TRMT13	89	58.763	ENSGACG00000013428	trmt13	97	51.398	Gasterosteus_aculeatus
ENSSBOG00000026541	TRMT13	100	69.087	ENSGAGG00000023303	TRMT13	99	73.091	Gopherus_agassizii
ENSSBOG00000026541	TRMT13	100	97.248	ENSGGOG00000005616	TRMT13	100	96.881	Gorilla_gorilla
ENSSBOG00000026541	TRMT13	96	53.602	ENSHBUG00000007754	trmt13	99	53.602	Haplochromis_burtoni
ENSSBOG00000026541	TRMT13	100	92.661	ENSHGLG00000002164	TRMT13	99	91.176	Heterocephalus_glaber_female
ENSSBOG00000026541	TRMT13	100	92.661	ENSHGLG00100001618	TRMT13	99	91.176	Heterocephalus_glaber_male
ENSSBOG00000026541	TRMT13	96	48.283	ENSHCOG00000020553	trmt13	98	47.854	Hippocampus_comes
ENSSBOG00000026541	TRMT13	92	62.000	ENSIPUG00000024787	trmt13	99	55.650	Ictalurus_punctatus
ENSSBOG00000026541	TRMT13	100	94.495	ENSSTOG00000013483	TRMT13	100	93.763	Ictidomys_tridecemlineatus
ENSSBOG00000026541	TRMT13	99	88.235	ENSJJAG00000018012	Trmt13	100	87.708	Jaculus_jaculus
ENSSBOG00000026541	TRMT13	64	50.160	ENSKMAG00000007639	trmt13	92	50.160	Kryptolebias_marmoratus
ENSSBOG00000026541	TRMT13	87	64.211	ENSLBEG00000020238	trmt13	99	51.148	Labrus_bergylta
ENSSBOG00000026541	TRMT13	96	62.232	ENSLACG00000013153	TRMT13	100	61.139	Latimeria_chalumnae
ENSSBOG00000026541	TRMT13	86	69.149	ENSLOCG00000000418	trmt13	97	59.389	Lepisosteus_oculatus
ENSSBOG00000026541	TRMT13	77	88.378	ENSLAFG00000002383	TRMT13	100	88.378	Loxodonta_africana
ENSSBOG00000026541	TRMT13	100	99.083	ENSMFAG00000034681	TRMT13	100	99.083	Macaca_fascicularis
ENSSBOG00000026541	TRMT13	100	99.083	ENSMMUG00000004243	TRMT13	100	99.083	Macaca_mulatta
ENSSBOG00000026541	TRMT13	100	99.083	ENSMNEG00000036102	TRMT13	100	99.083	Macaca_nemestrina
ENSSBOG00000026541	TRMT13	100	98.165	ENSMLEG00000034258	TRMT13	100	98.165	Mandrillus_leucophaeus
ENSSBOG00000026541	TRMT13	96	51.891	ENSMAMG00000016597	trmt13	98	51.891	Mastacembelus_armatus
ENSSBOG00000026541	TRMT13	96	53.178	ENSMZEG00005020959	trmt13	99	53.178	Maylandia_zebra
ENSSBOG00000026541	TRMT13	89	66.511	ENSMGAG00000006970	TRMT13	100	66.511	Meleagris_gallopavo
ENSSBOG00000026541	TRMT13	100	84.404	ENSMAUG00000010448	Trmt13	99	84.792	Mesocricetus_auratus
ENSSBOG00000026541	TRMT13	100	93.971	ENSMICG00000005283	TRMT13	100	93.971	Microcebus_murinus
ENSSBOG00000026541	TRMT13	100	84.404	ENSMOCG00000019914	Trmt13	99	82.292	Microtus_ochrogaster
ENSSBOG00000026541	TRMT13	72	53.165	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSSBOG00000026541	TRMT13	100	76.991	ENSMODG00000003646	TRMT13	100	75.670	Monodelphis_domestica
ENSSBOG00000026541	TRMT13	94	56.311	ENSMALG00000020965	trmt13	99	49.378	Monopterus_albus
ENSSBOG00000026541	TRMT13	99	88.889	MGP_CAROLIEiJ_G0025568	Trmt13	94	91.667	Mus_caroli
ENSSBOG00000026541	TRMT13	99	87.037	ENSMUSG00000033439	Trmt13	94	91.667	Mus_musculus
ENSSBOG00000026541	TRMT13	99	87.963	MGP_PahariEiJ_G0027014	Trmt13	99	86.792	Mus_pahari
ENSSBOG00000026541	TRMT13	99	87.963	MGP_SPRETEiJ_G0026518	Trmt13	94	91.667	Mus_spretus
ENSSBOG00000026541	TRMT13	79	88.451	ENSMPUG00000002078	-	100	88.451	Mustela_putorius_furo
ENSSBOG00000026541	TRMT13	100	90.826	ENSMPUG00000012169	-	98	89.474	Mustela_putorius_furo
ENSSBOG00000026541	TRMT13	100	91.743	ENSMLUG00000002124	TRMT13	100	79.626	Myotis_lucifugus
ENSSBOG00000026541	TRMT13	96	48.941	ENSNBRG00000006783	trmt13	95	50.216	Neolamprologus_brichardi
ENSSBOG00000026541	TRMT13	100	98.165	ENSNLEG00000035917	TRMT13	100	98.165	Nomascus_leucogenys
ENSSBOG00000026541	TRMT13	100	58.182	ENSMEUG00000013346	-	100	72.984	Notamacropus_eugenii
ENSSBOG00000026541	TRMT13	100	88.073	ENSOPRG00000012048	TRMT13	67	90.809	Ochotona_princeps
ENSSBOG00000026541	TRMT13	100	89.908	ENSODEG00000006075	-	95	89.820	Octodon_degus
ENSSBOG00000026541	TRMT13	96	53.390	ENSONIG00000004574	trmt13	99	53.390	Oreochromis_niloticus
ENSSBOG00000026541	TRMT13	89	74.478	ENSOANG00000012057	TRMT13	99	74.478	Ornithorhynchus_anatinus
ENSSBOG00000026541	TRMT13	100	91.060	ENSOCUG00000023095	TRMT13	100	91.060	Oryctolagus_cuniculus
ENSSBOG00000026541	TRMT13	96	48.729	ENSORLG00000003320	trmt13	99	49.364	Oryzias_latipes
ENSSBOG00000026541	TRMT13	95	49.036	ENSORLG00020005972	trmt13	97	49.266	Oryzias_latipes_hni
ENSSBOG00000026541	TRMT13	96	52.654	ENSORLG00015002270	trmt13	99	52.654	Oryzias_latipes_hsok
ENSSBOG00000026541	TRMT13	97	51.586	ENSOMEG00000006724	trmt13	95	52.220	Oryzias_melastigma
ENSSBOG00000026541	TRMT13	100	92.661	ENSOGAG00000005618	TRMT13	97	91.892	Otolemur_garnettii
ENSSBOG00000026541	TRMT13	100	90.229	ENSOARG00000017983	TRMT13	100	90.229	Ovis_aries
ENSSBOG00000026541	TRMT13	100	98.165	ENSPPAG00000043736	TRMT13	100	97.248	Pan_paniscus
ENSSBOG00000026541	TRMT13	100	92.661	ENSPPRG00000003424	TRMT13	100	92.661	Panthera_pardus
ENSSBOG00000026541	TRMT13	100	92.661	ENSPTIG00000018598	TRMT13	100	92.661	Panthera_tigris_altaica
ENSSBOG00000026541	TRMT13	100	98.165	ENSPTRG00000001001	TRMT13	100	97.248	Pan_troglodytes
ENSSBOG00000026541	TRMT13	100	99.083	ENSPANG00000007598	TRMT13	100	99.083	Papio_anubis
ENSSBOG00000026541	TRMT13	96	56.522	ENSPKIG00000001514	trmt13	98	56.522	Paramormyrops_kingsleyae
ENSSBOG00000026541	TRMT13	86	69.065	ENSPSIG00000012703	TRMT13	99	69.065	Pelodiscus_sinensis
ENSSBOG00000026541	TRMT13	85	64.516	ENSPMGG00000013298	trmt13	94	51.606	Periophthalmus_magnuspinnatus
ENSSBOG00000026541	TRMT13	100	84.404	ENSPEMG00000000275	Trmt13	99	83.958	Peromyscus_maniculatus_bairdii
ENSSBOG00000026541	TRMT13	88	55.000	ENSPMAG00000000823	trmt13	97	46.025	Petromyzon_marinus
ENSSBOG00000026541	TRMT13	99	75.676	ENSPCIG00000007699	TRMT13	99	76.299	Phascolarctos_cinereus
ENSSBOG00000026541	TRMT13	99	49.061	ENSPFOG00000008675	trmt13	99	49.061	Poecilia_formosa
ENSSBOG00000026541	TRMT13	95	49.149	ENSPLAG00000009709	trmt13	99	49.149	Poecilia_latipinna
ENSSBOG00000026541	TRMT13	95	48.408	ENSPMEG00000022954	trmt13	99	48.408	Poecilia_mexicana
ENSSBOG00000026541	TRMT13	88	56.000	ENSPREG00000005645	trmt13	91	50.719	Poecilia_reticulata
ENSSBOG00000026541	TRMT13	100	96.330	ENSPPYG00000001120	TRMT13	100	96.258	Pongo_abelii
ENSSBOG00000026541	TRMT13	100	88.150	ENSPCAG00000002340	TRMT13	100	88.150	Procavia_capensis
ENSSBOG00000026541	TRMT13	100	93.578	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSSBOG00000026541	TRMT13	100	91.476	ENSPVAG00000017430	TRMT13	100	91.476	Pteropus_vampyrus
ENSSBOG00000026541	TRMT13	96	51.907	ENSPNYG00000013690	trmt13	99	51.907	Pundamilia_nyererei
ENSSBOG00000026541	TRMT13	90	64.286	ENSPNAG00000022130	trmt13	99	55.603	Pygocentrus_nattereri
ENSSBOG00000026541	TRMT13	99	87.037	ENSRNOG00000015140	Trmt13	96	86.164	Rattus_norvegicus
ENSSBOG00000026541	TRMT13	100	99.083	ENSRBIG00000037686	TRMT13	100	99.083	Rhinopithecus_bieti
ENSSBOG00000026541	TRMT13	100	99.083	ENSRROG00000044057	TRMT13	100	99.083	Rhinopithecus_roxellana
ENSSBOG00000026541	TRMT13	91	76.659	ENSSHAG00000005213	TRMT13	97	76.659	Sarcophilus_harrisii
ENSSBOG00000026541	TRMT13	96	54.194	ENSSFOG00015017560	trmt13	98	54.409	Scleropages_formosus
ENSSBOG00000026541	TRMT13	94	57.843	ENSSMAG00000014592	trmt13	99	50.509	Scophthalmus_maximus
ENSSBOG00000026541	TRMT13	98	55.556	ENSSDUG00000015508	trmt13	99	50.101	Seriola_dumerili
ENSSBOG00000026541	TRMT13	98	55.556	ENSSLDG00000019060	trmt13	98	50.102	Seriola_lalandi_dorsalis
ENSSBOG00000026541	TRMT13	97	84.906	ENSSARG00000010344	TRMT13	99	75.789	Sorex_araneus
ENSSBOG00000026541	TRMT13	96	67.603	ENSSPUG00000016339	TRMT13	100	67.603	Sphenodon_punctatus
ENSSBOG00000026541	TRMT13	95	51.828	ENSSPAG00000011922	trmt13	98	51.915	Stegastes_partitus
ENSSBOG00000026541	TRMT13	100	92.661	ENSSSCG00000006869	TRMT13	100	91.476	Sus_scrofa
ENSSBOG00000026541	TRMT13	97	66.026	ENSTGUG00000005253	TRMT13	100	66.026	Taeniopygia_guttata
ENSSBOG00000026541	TRMT13	90	55.102	ENSTRUG00000008400	trmt13	99	49.269	Takifugu_rubripes
ENSSBOG00000026541	TRMT13	86	75.721	ENSTBEG00000008911	TRMT13	100	75.721	Tupaia_belangeri
ENSSBOG00000026541	TRMT13	70	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSSBOG00000026541	TRMT13	100	89.908	ENSUAMG00000017251	TRMT13	100	84.823	Ursus_americanus
ENSSBOG00000026541	TRMT13	100	91.743	ENSUMAG00000007901	TRMT13	100	90.021	Ursus_maritimus
ENSSBOG00000026541	TRMT13	90	73.843	ENSVPAG00000001034	TRMT13	100	73.843	Vicugna_pacos
ENSSBOG00000026541	TRMT13	99	90.852	ENSVVUG00000021996	TRMT13	99	90.852	Vulpes_vulpes
ENSSBOG00000026541	TRMT13	91	65.657	ENSXETG00000013204	trmt13	96	55.940	Xenopus_tropicalis
ENSSBOG00000026541	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSSBOG00000026541	TRMT13	95	48.085	ENSXMAG00000010765	trmt13	99	48.085	Xiphophorus_maculatus