EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000026693 (Gene tree)
Gene ID: 101033038
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 113551 bases
Position: chrJH378120.1:17147186-17260736
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000020259	rRNA_proc-arch	PF13234.6	8.8e-87	1	1
ENSSBOP00000020241	rRNA_proc-arch	PF13234.6	9.1e-87	1	1
ENSSBOP00000020257	rRNA_proc-arch	PF13234.6	9.3e-87	1	1
ENSSBOP00000020223	rRNA_proc-arch	PF13234.6	9.4e-87	1	1
ENSSBOP00000020259	DEAD	PF00270.29	6.1e-17	1	1
ENSSBOP00000020241	DEAD	PF00270.29	6.4e-17	1	1
ENSSBOP00000020257	DEAD	PF00270.29	6.4e-17	1	1
ENSSBOP00000020223	DEAD	PF00270.29	6.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000037087	MTREX-203	3147	-	ENSSBOP00000020257	1048 (aa)	-	A0A2K6TKT0
ENSSBOT00000037071	MTREX-202	4209	XM_003925848	ENSSBOP00000020241	1042 (aa)	XP_003925897	A0A2K6TKX1
ENSSBOT00000037052	MTREX-201	3162	-	ENSSBOP00000020223	1053 (aa)	-	A0A2K6TKR2
ENSSBOT00000037089	MTREX-204	3066	-	ENSSBOP00000020259	1021 (aa)	-	A0A2K6TKT6

Gene Model

Click here to download ENSSBOG00000026693's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000026693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000026693	MTREX	93	36.785	ENSSBOG00000027920	SKIV2L	86	35.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000026693	MTREX	100	99.040	ENSG00000039123	MTREX	100	99.040	Homo_sapiens
ENSSBOG00000026693	MTREX	100	83.524	ENSAPOG00000007814	mtrex	100	83.302	Acanthochromis_polyacanthus
ENSSBOG00000026693	MTREX	100	98.466	ENSAMEG00000013856	MTREX	100	98.466	Ailuropoda_melanoleuca
ENSSBOG00000026693	MTREX	100	81.611	ENSACIG00000015117	mtrex	96	87.983	Amphilophus_citrinellus
ENSSBOG00000026693	MTREX	100	83.333	ENSAOCG00000011884	mtrex	100	83.333	Amphiprion_ocellaris
ENSSBOG00000026693	MTREX	100	83.238	ENSAPEG00000019384	mtrex	100	83.238	Amphiprion_percula
ENSSBOG00000026693	MTREX	100	84.271	ENSATEG00000015117	mtrex	100	84.080	Anabas_testudineus
ENSSBOG00000026693	MTREX	95	94.245	ENSAPLG00000009694	MTREX	98	94.245	Anas_platyrhynchos
ENSSBOG00000026693	MTREX	100	90.979	ENSACAG00000015200	MTREX	96	90.787	Anolis_carolinensis
ENSSBOG00000026693	MTREX	100	99.905	ENSANAG00000023095	MTREX	100	99.905	Aotus_nancymaae
ENSSBOG00000026693	MTREX	100	83.048	ENSACLG00000001921	mtrex	100	82.920	Astatotilapia_calliptera
ENSSBOG00000026693	MTREX	97	81.729	ENSAMXG00000018751	mtrex	99	84.036	Astyanax_mexicanus
ENSSBOG00000026693	MTREX	100	98.273	ENSBTAG00000010518	MTREX	100	98.273	Bos_taurus
ENSSBOG00000026693	MTREX	93	53.628	WBGene00012342	mtr-4	94	53.251	Caenorhabditis_elegans
ENSSBOG00000026693	MTREX	100	99.905	ENSCJAG00000001773	MTREX	100	99.905	Callithrix_jacchus
ENSSBOG00000026693	MTREX	100	98.560	ENSCAFG00000006818	MTREX	100	98.560	Canis_familiaris
ENSSBOG00000026693	MTREX	100	98.560	ENSCAFG00020024352	MTREX	100	98.560	Canis_lupus_dingo
ENSSBOG00000026693	MTREX	100	98.369	ENSCHIG00000024413	MTREX	100	98.369	Capra_hircus
ENSSBOG00000026693	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSSBOG00000026693	MTREX	98	73.948	ENSCAPG00000008696	MTREX	100	73.948	Cavia_aperea
ENSSBOG00000026693	MTREX	100	98.177	ENSCPOG00000009797	MTREX	100	98.177	Cavia_porcellus
ENSSBOG00000026693	MTREX	100	99.618	ENSCCAG00000014177	MTREX	100	99.618	Cebus_capucinus
ENSSBOG00000026693	MTREX	100	98.848	ENSCATG00000042153	MTREX	100	98.848	Cercocebus_atys
ENSSBOG00000026693	MTREX	100	97.985	ENSCLAG00000006622	MTREX	100	97.985	Chinchilla_lanigera
ENSSBOG00000026693	MTREX	100	94.450	ENSCSAG00000016445	MTREX	100	94.450	Chlorocebus_sabaeus
ENSSBOG00000026693	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSSBOG00000026693	MTREX	98	94.483	ENSCPBG00000026551	MTREX	94	92.234	Chrysemys_picta_bellii
ENSSBOG00000026693	MTREX	99	66.444	ENSCING00000003239	-	100	66.796	Ciona_intestinalis
ENSSBOG00000026693	MTREX	99	65.990	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSSBOG00000026693	MTREX	100	98.752	ENSCANG00000035770	MTREX	100	98.752	Colobus_angolensis_palliatus
ENSSBOG00000026693	MTREX	100	97.601	ENSCGRG00001024680	Mtrex	100	97.601	Cricetulus_griseus_chok1gshd
ENSSBOG00000026693	MTREX	100	97.601	ENSCGRG00000000307	Mtrex	100	97.601	Cricetulus_griseus_crigri
ENSSBOG00000026693	MTREX	100	81.948	ENSCSEG00000018621	mtrex	98	82.061	Cynoglossus_semilaevis
ENSSBOG00000026693	MTREX	100	83.889	ENSCVAG00000004556	mtrex	100	83.859	Cyprinodon_variegatus
ENSSBOG00000026693	MTREX	100	84.909	ENSDARG00000013457	mtrex	100	84.623	Danio_rerio
ENSSBOG00000026693	MTREX	100	96.941	ENSDNOG00000015375	MTREX	100	96.941	Dasypus_novemcinctus
ENSSBOG00000026693	MTREX	100	98.081	ENSDORG00000006782	Mtrex	100	98.081	Dipodomys_ordii
ENSSBOG00000026693	MTREX	94	66.701	FBgn0001986	Mtr4	94	64.606	Drosophila_melanogaster
ENSSBOG00000026693	MTREX	90	80.193	ENSETEG00000000727	MTREX	90	80.055	Echinops_telfairi
ENSSBOG00000026693	MTREX	99	74.563	ENSEBUG00000012869	mtrex	100	74.563	Eptatretus_burgeri
ENSSBOG00000026693	MTREX	100	97.985	ENSEASG00005013270	MTREX	100	97.985	Equus_asinus_asinus
ENSSBOG00000026693	MTREX	100	98.081	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSSBOG00000026693	MTREX	98	88.195	ENSEEUG00000000527	MTREX	100	88.195	Erinaceus_europaeus
ENSSBOG00000026693	MTREX	96	87.284	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSSBOG00000026693	MTREX	100	98.369	ENSFCAG00000010575	MTREX	100	98.369	Felis_catus
ENSSBOG00000026693	MTREX	100	89.943	ENSFALG00000010850	MTREX	100	89.847	Ficedula_albicollis
ENSSBOG00000026693	MTREX	100	97.601	ENSFDAG00000011199	MTREX	100	97.601	Fukomys_damarensis
ENSSBOG00000026693	MTREX	100	83.794	ENSFHEG00000023014	mtrex	100	82.241	Fundulus_heteroclitus
ENSSBOG00000026693	MTREX	100	79.962	ENSGMOG00000014702	mtrex	100	79.962	Gadus_morhua
ENSSBOG00000026693	MTREX	100	91.363	ENSGALG00000014709	MTREX	86	91.228	Gallus_gallus
ENSSBOG00000026693	MTREX	100	83.889	ENSGAFG00000012425	mtrex	98	87.500	Gambusia_affinis
ENSSBOG00000026693	MTREX	100	79.314	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSSBOG00000026693	MTREX	100	91.850	ENSGAGG00000020036	MTREX	100	91.563	Gopherus_agassizii
ENSSBOG00000026693	MTREX	100	99.136	ENSGGOG00000001867	MTREX	100	99.136	Gorilla_gorilla
ENSSBOG00000026693	MTREX	100	83.048	ENSHBUG00000006229	mtrex	100	82.920	Haplochromis_burtoni
ENSSBOG00000026693	MTREX	100	97.889	ENSHGLG00000019445	SKIV2L2	100	97.889	Heterocephalus_glaber_female
ENSSBOG00000026693	MTREX	100	97.889	ENSHGLG00100011833	SKIV2L2	100	97.889	Heterocephalus_glaber_male
ENSSBOG00000026693	MTREX	93	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSSBOG00000026693	MTREX	98	87.264	ENSIPUG00000024348	skiv2l2	100	85.182	Ictalurus_punctatus
ENSSBOG00000026693	MTREX	100	98.273	ENSSTOG00000010802	MTREX	100	98.273	Ictidomys_tridecemlineatus
ENSSBOG00000026693	MTREX	100	90.211	ENSJJAG00000020975	Mtrex	100	90.019	Jaculus_jaculus
ENSSBOG00000026693	MTREX	100	83.127	ENSKMAG00000012642	mtrex	96	87.043	Kryptolebias_marmoratus
ENSSBOG00000026693	MTREX	100	83.619	ENSLBEG00000019367	mtrex	99	86.340	Labrus_bergylta
ENSSBOG00000026693	MTREX	98	90.490	ENSLACG00000009075	MTREX	100	87.870	Latimeria_chalumnae
ENSSBOG00000026693	MTREX	100	87.261	ENSLOCG00000010186	mtrex	100	86.973	Lepisosteus_oculatus
ENSSBOG00000026693	MTREX	99	95.777	ENSLAFG00000010497	MTREX	100	95.777	Loxodonta_africana
ENSSBOG00000026693	MTREX	100	98.848	ENSMFAG00000031610	MTREX	100	98.848	Macaca_fascicularis
ENSSBOG00000026693	MTREX	100	97.318	ENSMMUG00000010379	MTREX	100	97.318	Macaca_mulatta
ENSSBOG00000026693	MTREX	100	98.848	ENSMNEG00000032746	MTREX	100	98.848	Macaca_nemestrina
ENSSBOG00000026693	MTREX	100	98.848	ENSMLEG00000041051	MTREX	100	98.848	Mandrillus_leucophaeus
ENSSBOG00000026693	MTREX	97	86.273	ENSMAMG00000016753	mtrex	99	85.728	Mastacembelus_armatus
ENSSBOG00000026693	MTREX	100	83.048	ENSMZEG00005000414	mtrex	100	82.920	Maylandia_zebra
ENSSBOG00000026693	MTREX	96	67.611	ENSMGAG00000003980	MTREX	99	67.611	Meleagris_gallopavo
ENSSBOG00000026693	MTREX	100	97.505	ENSMAUG00000010727	Mtrex	100	97.505	Mesocricetus_auratus
ENSSBOG00000026693	MTREX	100	99.136	ENSMICG00000012779	MTREX	100	99.136	Microcebus_murinus
ENSSBOG00000026693	MTREX	100	97.505	ENSMOCG00000019886	Mtrex	100	97.505	Microtus_ochrogaster
ENSSBOG00000026693	MTREX	100	81.775	ENSMMOG00000002476	mtrex	96	87.591	Mola_mola
ENSSBOG00000026693	MTREX	98	95.085	ENSMODG00000019494	MTREX	100	92.898	Monodelphis_domestica
ENSSBOG00000026693	MTREX	93	82.600	ENSMALG00000002917	mtrex	99	82.600	Monopterus_albus
ENSSBOG00000026693	MTREX	100	96.929	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	Mus_caroli
ENSSBOG00000026693	MTREX	100	97.217	ENSMUSG00000016018	Mtrex	100	97.217	Mus_musculus
ENSSBOG00000026693	MTREX	100	97.121	MGP_PahariEiJ_G0015967	Mtrex	100	97.121	Mus_pahari
ENSSBOG00000026693	MTREX	100	97.217	MGP_SPRETEiJ_G0019775	Mtrex	100	97.217	Mus_spretus
ENSSBOG00000026693	MTREX	100	98.752	ENSMPUG00000007619	MTREX	100	98.752	Mustela_putorius_furo
ENSSBOG00000026693	MTREX	100	96.555	ENSMLUG00000001152	MTREX	100	96.555	Myotis_lucifugus
ENSSBOG00000026693	MTREX	100	97.985	ENSNGAG00000011938	Mtrex	100	97.985	Nannospalax_galili
ENSSBOG00000026693	MTREX	100	83.143	ENSNBRG00000011293	mtrex	100	83.015	Neolamprologus_brichardi
ENSSBOG00000026693	MTREX	100	94.923	ENSNLEG00000001494	MTREX	100	94.923	Nomascus_leucogenys
ENSSBOG00000026693	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSSBOG00000026693	MTREX	100	81.862	ENSOPRG00000008009	MTREX	100	81.766	Ochotona_princeps
ENSSBOG00000026693	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSSBOG00000026693	MTREX	100	82.729	ENSONIG00000007587	mtrex	100	82.824	Oreochromis_niloticus
ENSSBOG00000026693	MTREX	50	93.945	ENSOANG00000004885	-	99	93.945	Ornithorhynchus_anatinus
ENSSBOG00000026693	MTREX	100	98.464	ENSOCUG00000004463	MTREX	100	98.464	Oryctolagus_cuniculus
ENSSBOG00000026693	MTREX	100	82.745	ENSORLG00000005443	mtrex	100	82.555	Oryzias_latipes
ENSSBOG00000026693	MTREX	100	82.650	ENSORLG00020006329	mtrex	100	82.459	Oryzias_latipes_hni
ENSSBOG00000026693	MTREX	100	82.650	ENSORLG00015012924	mtrex	100	82.459	Oryzias_latipes_hsok
ENSSBOG00000026693	MTREX	100	82.129	ENSOMEG00000008825	mtrex	100	81.749	Oryzias_melastigma
ENSSBOG00000026693	MTREX	100	98.560	ENSOGAG00000002886	MTREX	100	98.560	Otolemur_garnettii
ENSSBOG00000026693	MTREX	100	98.086	ENSOARG00000007764	MTREX	100	98.086	Ovis_aries
ENSSBOG00000026693	MTREX	100	99.040	ENSPPAG00000039291	MTREX	100	99.040	Pan_paniscus
ENSSBOG00000026693	MTREX	100	98.369	ENSPPRG00000019701	MTREX	100	98.369	Panthera_pardus
ENSSBOG00000026693	MTREX	100	96.833	ENSPTIG00000009313	MTREX	100	96.833	Panthera_tigris_altaica
ENSSBOG00000026693	MTREX	100	99.040	ENSPTRG00000016878	MTREX	100	99.040	Pan_troglodytes
ENSSBOG00000026693	MTREX	100	98.752	ENSPANG00000009697	MTREX	100	98.752	Papio_anubis
ENSSBOG00000026693	MTREX	100	87.011	ENSPKIG00000020833	mtrex	99	87.894	Paramormyrops_kingsleyae
ENSSBOG00000026693	MTREX	98	94.082	ENSPSIG00000012150	MTREX	100	91.946	Pelodiscus_sinensis
ENSSBOG00000026693	MTREX	100	81.030	ENSPMGG00000002582	mtrex	98	84.631	Periophthalmus_magnuspinnatus
ENSSBOG00000026693	MTREX	95	65.763	ENSPMAG00000009668	mtrex	100	65.562	Petromyzon_marinus
ENSSBOG00000026693	MTREX	93	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSSBOG00000026693	MTREX	77	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSSBOG00000026693	MTREX	100	83.794	ENSPLAG00000021311	mtrex	100	83.603	Poecilia_latipinna
ENSSBOG00000026693	MTREX	93	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSSBOG00000026693	MTREX	100	83.508	ENSPREG00000003089	mtrex	100	83.317	Poecilia_reticulata
ENSSBOG00000026693	MTREX	98	99.122	ENSPPYG00000015469	MTREX	98	99.122	Pongo_abelii
ENSSBOG00000026693	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSSBOG00000026693	MTREX	99	92.850	ENSPCOG00000018092	MTREX	100	92.744	Propithecus_coquereli
ENSSBOG00000026693	MTREX	100	98.560	ENSPVAG00000002445	MTREX	100	98.560	Pteropus_vampyrus
ENSSBOG00000026693	MTREX	100	82.952	ENSPNYG00000006164	mtrex	100	82.824	Pundamilia_nyererei
ENSSBOG00000026693	MTREX	100	86.055	ENSPNAG00000008794	mtrex	100	86.055	Pygocentrus_nattereri
ENSSBOG00000026693	MTREX	99	97.085	ENSRNOG00000010125	Mtrex	100	94.653	Rattus_norvegicus
ENSSBOG00000026693	MTREX	100	97.121	ENSRBIG00000034930	MTREX	100	97.121	Rhinopithecus_bieti
ENSSBOG00000026693	MTREX	100	98.848	ENSRROG00000039895	MTREX	100	98.848	Rhinopithecus_roxellana
ENSSBOG00000026693	MTREX	91	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSSBOG00000026693	MTREX	98	95.286	ENSSHAG00000004600	MTREX	100	95.286	Sarcophilus_harrisii
ENSSBOG00000026693	MTREX	100	87.380	ENSSFOG00015014355	skiv2l2	100	87.380	Scleropages_formosus
ENSSBOG00000026693	MTREX	100	83.143	ENSSMAG00000007572	mtrex	100	83.143	Scophthalmus_maximus
ENSSBOG00000026693	MTREX	100	83.779	ENSSDUG00000023789	mtrex	100	83.779	Seriola_dumerili
ENSSBOG00000026693	MTREX	100	83.683	ENSSLDG00000006301	mtrex	100	83.588	Seriola_lalandi_dorsalis
ENSSBOG00000026693	MTREX	100	94.434	ENSSARG00000008387	MTREX	100	94.434	Sorex_araneus
ENSSBOG00000026693	MTREX	100	79.866	ENSSPUG00000007071	MTREX	100	80.058	Sphenodon_punctatus
ENSSBOG00000026693	MTREX	93	87.513	ENSSPAG00000011319	mtrex	94	87.933	Stegastes_partitus
ENSSBOG00000026693	MTREX	100	98.560	ENSSSCG00000016911	MTREX	100	98.560	Sus_scrofa
ENSSBOG00000026693	MTREX	100	89.837	ENSTGUG00000002480	MTREX	100	89.539	Taeniopygia_guttata
ENSSBOG00000026693	MTREX	100	82.687	ENSTRUG00000014571	mtrex	100	82.745	Takifugu_rubripes
ENSSBOG00000026693	MTREX	100	82.342	ENSTBEG00000007769	MTREX	100	82.342	Tupaia_belangeri
ENSSBOG00000026693	MTREX	100	98.081	ENSTTRG00000008678	MTREX	100	98.081	Tursiops_truncatus
ENSSBOG00000026693	MTREX	100	98.464	ENSUAMG00000023061	MTREX	100	98.464	Ursus_americanus
ENSSBOG00000026693	MTREX	100	97.893	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSSBOG00000026693	MTREX	100	87.236	ENSVPAG00000011174	MTREX	100	87.236	Vicugna_pacos
ENSSBOG00000026693	MTREX	100	98.752	ENSVVUG00000021337	MTREX	100	98.752	Vulpes_vulpes
ENSSBOG00000026693	MTREX	100	88.495	ENSXETG00000032798	MTREX	100	88.495	Xenopus_tropicalis
ENSSBOG00000026693	MTREX	100	83.603	ENSXMAG00000004799	mtrex	97	87.578	Xiphophorus_maculatus