EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000027023 (Gene tree)
Gene ID: 104652307
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 222447 bases
Position: chrJH378164.1:2681240-2903686
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000021082	RRM_1	PF00076.22	4.3e-09	1	1
ENSSBOP00000021087	RRM_1	PF00076.22	4.3e-09	1	1
ENSSBOP00000021098	RRM_1	PF00076.22	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000037922	SCAF8-202	4010	XM_010344280	ENSSBOP00000021087	1271 (aa)	XP_010342582	A0A2K6TNA1
ENSSBOT00000037933	SCAF8-203	4596	XM_010344281	ENSSBOP00000021098	1271 (aa)	XP_010342583	A0A2K6TNA1
ENSSBOT00000037917	SCAF8-201	4667	XM_010344282	ENSSBOP00000021082	1271 (aa)	XP_010342584	A0A2K6TNA1

Gene Model

Click here to download ENSSBOG00000027023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027023	SCAF8	100	98.348	ENSG00000213079	SCAF8	100	98.348	Homo_sapiens
ENSSBOG00000027023	SCAF8	87	68.825	ENSAPOG00000015527	SCAF8	77	68.465	Acanthochromis_polyacanthus
ENSSBOG00000027023	SCAF8	100	94.118	ENSAMEG00000007583	SCAF8	97	94.118	Ailuropoda_melanoleuca
ENSSBOG00000027023	SCAF8	87	68.825	ENSAOCG00000002421	SCAF8	76	68.465	Amphiprion_ocellaris
ENSSBOG00000027023	SCAF8	88	65.745	ENSATEG00000006959	SCAF8	97	65.102	Anabas_testudineus
ENSSBOG00000027023	SCAF8	100	79.345	ENSAPLG00000005765	SCAF8	100	79.267	Anas_platyrhynchos
ENSSBOG00000027023	SCAF8	99	74.843	ENSACAG00000005282	SCAF8	99	74.607	Anolis_carolinensis
ENSSBOG00000027023	SCAF8	100	99.213	ENSANAG00000036184	SCAF8	100	99.213	Aotus_nancymaae
ENSSBOG00000027023	SCAF8	86	69.306	ENSACLG00000018828	SCAF8	80	68.902	Astatotilapia_calliptera
ENSSBOG00000027023	SCAF8	100	94.650	ENSBTAG00000031917	SCAF8	100	94.650	Bos_taurus
ENSSBOG00000027023	SCAF8	100	98.820	ENSCJAG00000012631	SCAF8	97	97.214	Callithrix_jacchus
ENSSBOG00000027023	SCAF8	99	95.649	ENSCAFG00000000570	SCAF8	99	95.649	Canis_familiaris
ENSSBOG00000027023	SCAF8	99	95.645	ENSCAFG00020015048	SCAF8	99	95.580	Canis_lupus_dingo
ENSSBOG00000027023	SCAF8	100	94.571	ENSCHIG00000025041	SCAF8	100	94.571	Capra_hircus
ENSSBOG00000027023	SCAF8	99	96.200	ENSTSYG00000010991	SCAF8	97	96.200	Carlito_syrichta
ENSSBOG00000027023	SCAF8	65	97.845	ENSCAPG00000003300	SCAF8	86	97.807	Cavia_aperea
ENSSBOG00000027023	SCAF8	99	87.283	ENSCPOG00000022216	-	99	86.493	Cavia_porcellus
ENSSBOG00000027023	SCAF8	100	99.056	ENSCCAG00000024952	SCAF8	100	99.056	Cebus_capucinus
ENSSBOG00000027023	SCAF8	100	98.348	ENSCATG00000035361	SCAF8	100	98.348	Cercocebus_atys
ENSSBOG00000027023	SCAF8	100	94.104	ENSCLAG00000004910	SCAF8	100	94.612	Chinchilla_lanigera
ENSSBOG00000027023	SCAF8	100	96.904	ENSCSAG00000013430	SCAF8	100	96.904	Chlorocebus_sabaeus
ENSSBOG00000027023	SCAF8	100	75.164	ENSCPBG00000016330	SCAF8	100	82.385	Chrysemys_picta_bellii
ENSSBOG00000027023	SCAF8	100	98.190	ENSCANG00000039499	SCAF8	99	98.176	Colobus_angolensis_palliatus
ENSSBOG00000027023	SCAF8	100	91.824	ENSCGRG00001020167	Scaf8	100	91.824	Cricetulus_griseus_chok1gshd
ENSSBOG00000027023	SCAF8	99	91.686	ENSCGRG00000004120	Scaf8	99	91.686	Cricetulus_griseus_crigri
ENSSBOG00000027023	SCAF8	87	66.024	ENSCSEG00000000043	-	78	67.229	Cynoglossus_semilaevis
ENSSBOG00000027023	SCAF8	88	67.104	ENSCVAG00000000925	SCAF8	77	66.579	Cyprinodon_variegatus
ENSSBOG00000027023	SCAF8	96	89.418	ENSDNOG00000025271	SCAF8	100	93.027	Dasypus_novemcinctus
ENSSBOG00000027023	SCAF8	99	92.981	ENSDORG00000006391	Scaf8	100	93.060	Dipodomys_ordii
ENSSBOG00000027023	SCAF8	100	95.833	ENSEASG00005018879	SCAF8	100	95.755	Equus_asinus_asinus
ENSSBOG00000027023	SCAF8	100	95.987	ENSECAG00000005540	SCAF8	100	95.987	Equus_caballus
ENSSBOG00000027023	SCAF8	88	65.000	ENSELUG00000002779	SCAF8	75	65.439	Esox_lucius
ENSSBOG00000027023	SCAF8	100	96.145	ENSFCAG00000023424	SCAF8	100	96.145	Felis_catus
ENSSBOG00000027023	SCAF8	100	78.738	ENSFALG00000012433	SCAF8	100	78.833	Ficedula_albicollis
ENSSBOG00000027023	SCAF8	99	95.166	ENSFDAG00000010335	SCAF8	99	95.020	Fukomys_damarensis
ENSSBOG00000027023	SCAF8	92	68.804	ENSFHEG00000008284	SCAF8	77	68.434	Fundulus_heteroclitus
ENSSBOG00000027023	SCAF8	59	68.519	ENSGMOG00000018812	SCAF8	66	70.635	Gadus_morhua
ENSSBOG00000027023	SCAF8	99	79.751	ENSGALG00000013635	SCAF8	99	79.283	Gallus_gallus
ENSSBOG00000027023	SCAF8	92	68.550	ENSGAFG00000018033	SCAF8	78	65.233	Gambusia_affinis
ENSSBOG00000027023	SCAF8	93	54.173	ENSGACG00000006909	SCAF8	100	54.812	Gasterosteus_aculeatus
ENSSBOG00000027023	SCAF8	63	72.660	ENSGAGG00000017820	-	88	72.167	Gopherus_agassizii
ENSSBOG00000027023	SCAF8	100	98.348	ENSGGOG00000008645	SCAF8	100	98.348	Gorilla_gorilla
ENSSBOG00000027023	SCAF8	86	69.184	ENSHBUG00000019537	SCAF8	80	68.780	Haplochromis_burtoni
ENSSBOG00000027023	SCAF8	100	95.047	ENSHGLG00000003619	SCAF8	100	95.047	Heterocephalus_glaber_female
ENSSBOG00000027023	SCAF8	100	94.418	ENSHGLG00100004708	SCAF8	100	95.008	Heterocephalus_glaber_male
ENSSBOG00000027023	SCAF8	99	95.807	ENSSTOG00000026043	SCAF8	99	95.807	Ictidomys_tridecemlineatus
ENSSBOG00000027023	SCAF8	100	92.531	ENSJJAG00000020480	Scaf8	100	92.531	Jaculus_jaculus
ENSSBOG00000027023	SCAF8	87	68.351	ENSKMAG00000012767	SCAF8	78	67.990	Kryptolebias_marmoratus
ENSSBOG00000027023	SCAF8	62	75.926	ENSLBEG00000012484	-	59	76.071	Labrus_bergylta
ENSSBOG00000027023	SCAF8	88	75.639	ENSLACG00000001394	SCAF8	99	73.691	Latimeria_chalumnae
ENSSBOG00000027023	SCAF8	100	61.376	ENSLOCG00000016856	SCAF8	100	60.000	Lepisosteus_oculatus
ENSSBOG00000027023	SCAF8	100	92.852	ENSLAFG00000000022	SCAF8	100	93.401	Loxodonta_africana
ENSSBOG00000027023	SCAF8	100	98.505	ENSMFAG00000032738	SCAF8	100	98.505	Macaca_fascicularis
ENSSBOG00000027023	SCAF8	100	98.505	ENSMMUG00000015163	SCAF8	100	98.505	Macaca_mulatta
ENSSBOG00000027023	SCAF8	100	98.505	ENSMNEG00000043466	SCAF8	100	98.505	Macaca_nemestrina
ENSSBOG00000027023	SCAF8	99	98.335	ENSMLEG00000034845	SCAF8	99	98.335	Mandrillus_leucophaeus
ENSSBOG00000027023	SCAF8	83	65.478	ENSMAMG00000009457	SCAF8	76	64.586	Mastacembelus_armatus
ENSSBOG00000027023	SCAF8	86	69.184	ENSMZEG00005005698	SCAF8	80	68.780	Maylandia_zebra
ENSSBOG00000027023	SCAF8	99	79.782	ENSMGAG00000012762	SCAF8	100	79.471	Meleagris_gallopavo
ENSSBOG00000027023	SCAF8	99	91.284	ENSMAUG00000009513	Scaf8	100	91.284	Mesocricetus_auratus
ENSSBOG00000027023	SCAF8	100	95.991	ENSMICG00000028965	SCAF8	100	95.833	Microcebus_murinus
ENSSBOG00000027023	SCAF8	100	92.296	ENSMOCG00000014950	Scaf8	100	92.296	Microtus_ochrogaster
ENSSBOG00000027023	SCAF8	84	64.975	ENSMMOG00000002216	SCAF8	78	63.959	Mola_mola
ENSSBOG00000027023	SCAF8	99	86.640	ENSMODG00000008301	SCAF8	99	86.640	Monodelphis_domestica
ENSSBOG00000027023	SCAF8	87	67.866	ENSMALG00000011584	SCAF8	78	68.402	Monopterus_albus
ENSSBOG00000027023	SCAF8	100	91.345	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.345	Mus_caroli
ENSSBOG00000027023	SCAF8	100	91.345	ENSMUSG00000046201	Scaf8	100	91.345	Mus_musculus
ENSSBOG00000027023	SCAF8	100	92.054	MGP_PahariEiJ_G0023334	Scaf8	100	92.054	Mus_pahari
ENSSBOG00000027023	SCAF8	100	93.885	ENSMPUG00000001974	SCAF8	100	93.885	Mustela_putorius_furo
ENSSBOG00000027023	SCAF8	100	93.391	ENSMLUG00000029190	SCAF8	100	93.391	Myotis_lucifugus
ENSSBOG00000027023	SCAF8	100	92.925	ENSNGAG00000012332	Scaf8	100	92.925	Nannospalax_galili
ENSSBOG00000027023	SCAF8	96	63.023	ENSNBRG00000009067	SCAF8	100	52.579	Neolamprologus_brichardi
ENSSBOG00000027023	SCAF8	100	97.096	ENSNLEG00000015509	SCAF8	99	96.777	Nomascus_leucogenys
ENSSBOG00000027023	SCAF8	70	91.964	ENSOPRG00000018413	-	76	92.929	Ochotona_princeps
ENSSBOG00000027023	SCAF8	100	94.737	ENSODEG00000007296	SCAF8	100	94.737	Octodon_degus
ENSSBOG00000027023	SCAF8	100	55.281	ENSONIG00000008119	SCAF8	99	55.108	Oreochromis_niloticus
ENSSBOG00000027023	SCAF8	99	95.965	ENSOCUG00000026063	SCAF8	99	95.965	Oryctolagus_cuniculus
ENSSBOG00000027023	SCAF8	86	68.927	ENSORLG00000017358	SCAF8	78	68.927	Oryzias_latipes
ENSSBOG00000027023	SCAF8	86	69.051	ENSORLG00020002214	SCAF8	78	69.051	Oryzias_latipes_hni
ENSSBOG00000027023	SCAF8	86	69.174	ENSORLG00015015779	SCAF8	78	69.174	Oryzias_latipes_hsok
ENSSBOG00000027023	SCAF8	88	66.980	ENSOMEG00000015471	SCAF8	77	69.174	Oryzias_melastigma
ENSSBOG00000027023	SCAF8	100	94.582	ENSOGAG00000034223	SCAF8	97	94.582	Otolemur_garnettii
ENSSBOG00000027023	SCAF8	99	94.374	ENSOARG00000004159	SCAF8	100	94.374	Ovis_aries
ENSSBOG00000027023	SCAF8	100	98.190	ENSPPAG00000039826	SCAF8	100	98.190	Pan_paniscus
ENSSBOG00000027023	SCAF8	100	96.223	ENSPPRG00000023175	SCAF8	100	96.223	Panthera_pardus
ENSSBOG00000027023	SCAF8	99	96.120	ENSPTIG00000014836	SCAF8	100	96.120	Panthera_tigris_altaica
ENSSBOG00000027023	SCAF8	100	98.190	ENSPTRG00000018727	SCAF8	100	98.190	Pan_troglodytes
ENSSBOG00000027023	SCAF8	100	98.348	ENSPANG00000017489	SCAF8	100	96.381	Papio_anubis
ENSSBOG00000027023	SCAF8	100	55.955	ENSPKIG00000021212	SCAF8	100	70.767	Paramormyrops_kingsleyae
ENSSBOG00000027023	SCAF8	89	74.265	ENSPSIG00000008614	SCAF8	93	78.470	Pelodiscus_sinensis
ENSSBOG00000027023	SCAF8	99	92.076	ENSPEMG00000010531	Scaf8	100	92.076	Peromyscus_maniculatus_bairdii
ENSSBOG00000027023	SCAF8	100	87.431	ENSPCIG00000001141	SCAF8	100	87.431	Phascolarctos_cinereus
ENSSBOG00000027023	SCAF8	92	69.174	ENSPFOG00000004176	SCAF8	100	54.981	Poecilia_formosa
ENSSBOG00000027023	SCAF8	92	69.051	ENSPLAG00000021432	SCAF8	77	68.557	Poecilia_latipinna
ENSSBOG00000027023	SCAF8	92	69.297	ENSPMEG00000007591	SCAF8	84	68.258	Poecilia_mexicana
ENSSBOG00000027023	SCAF8	92	69.051	ENSPREG00000000652	SCAF8	77	68.557	Poecilia_reticulata
ENSSBOG00000027023	SCAF8	100	96.858	ENSPPYG00000017121	SCAF8	100	96.858	Pongo_abelii
ENSSBOG00000027023	SCAF8	85	96.817	ENSPCAG00000013044	SCAF8	90	96.817	Procavia_capensis
ENSSBOG00000027023	SCAF8	100	96.148	ENSPCOG00000002067	SCAF8	99	96.117	Propithecus_coquereli
ENSSBOG00000027023	SCAF8	99	92.252	ENSPVAG00000005582	SCAF8	100	93.291	Pteropus_vampyrus
ENSSBOG00000027023	SCAF8	86	69.306	ENSPNYG00000007277	SCAF8	80	68.902	Pundamilia_nyererei
ENSSBOG00000027023	SCAF8	86	68.176	ENSPNAG00000024740	SCAF8	82	68.543	Pygocentrus_nattereri
ENSSBOG00000027023	SCAF8	100	91.581	ENSRNOG00000016919	Scaf8	100	91.581	Rattus_norvegicus
ENSSBOG00000027023	SCAF8	100	98.269	ENSRBIG00000035769	SCAF8	100	98.269	Rhinopithecus_bieti
ENSSBOG00000027023	SCAF8	100	98.190	ENSRROG00000013580	SCAF8	100	98.190	Rhinopithecus_roxellana
ENSSBOG00000027023	SCAF8	100	86.735	ENSSHAG00000009915	SCAF8	100	86.735	Sarcophilus_harrisii
ENSSBOG00000027023	SCAF8	100	54.343	ENSSFOG00015009481	SCAF8	87	70.000	Scleropages_formosus
ENSSBOG00000027023	SCAF8	87	67.947	ENSSMAG00000008275	SCAF8	77	67.347	Scophthalmus_maximus
ENSSBOG00000027023	SCAF8	100	77.795	ENSSPUG00000015219	SCAF8	100	77.585	Sphenodon_punctatus
ENSSBOG00000027023	SCAF8	100	95.751	ENSSSCG00000004070	SCAF8	100	95.751	Sus_scrofa
ENSSBOG00000027023	SCAF8	99	80.189	ENSTGUG00000011151	SCAF8	100	80.346	Taeniopygia_guttata
ENSSBOG00000027023	SCAF8	85	67.488	ENSTRUG00000009243	SCAF8	78	67.488	Takifugu_rubripes
ENSSBOG00000027023	SCAF8	87	64.982	ENSTNIG00000016885	SCAF8	99	65.102	Tetraodon_nigroviridis
ENSSBOG00000027023	SCAF8	99	94.687	ENSTTRG00000014538	SCAF8	100	94.687	Tursiops_truncatus
ENSSBOG00000027023	SCAF8	100	95.673	ENSUAMG00000024736	SCAF8	99	95.638	Ursus_americanus
ENSSBOG00000027023	SCAF8	98	95.666	ENSUMAG00000013404	SCAF8	100	95.666	Ursus_maritimus
ENSSBOG00000027023	SCAF8	67	85.000	ENSVPAG00000012465	SCAF8	99	84.411	Vicugna_pacos
ENSSBOG00000027023	SCAF8	99	95.724	ENSVVUG00000007532	SCAF8	100	95.746	Vulpes_vulpes
ENSSBOG00000027023	SCAF8	100	61.330	ENSXETG00000013132	scaf8	100	61.348	Xenopus_tropicalis
ENSSBOG00000027023	SCAF8	92	69.174	ENSXMAG00000019192	SCAF8	78	68.681	Xiphophorus_maculatus