EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSBOG00000027089 (Gene tree)
Gene ID
101030186
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Saimiri_boliviensis_boliviensis
Status
putative
Strand
Plus strand
Length
10548 bases
Position
chrJH378258.1:1114766-1125313
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSBOP00000021175RRM_1PF00076.222.5e-4312
ENSSBOP00000021175RRM_1PF00076.222.5e-4322
ENSSBOP00000021131RRM_1PF00076.222.7e-4312
ENSSBOP00000021131RRM_1PF00076.222.7e-4322
ENSSBOP00000021167RRM_1PF00076.222.9e-4312
ENSSBOP00000021167RRM_1PF00076.222.9e-4322
ENSSBOP00000021116RRM_1PF00076.223.2e-4312
ENSSBOP00000021116RRM_1PF00076.223.2e-4322
ENSSBOP00000021138RRM_1PF00076.223.5e-4312
ENSSBOP00000021138RRM_1PF00076.223.5e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSBOT00000037973PUF60-2031668-ENSSBOP00000021138555 (aa)-A0A2K6TNA3
ENSSBOT00000038001PUF60-2041941XM_003942059ENSSBOP00000021167532 (aa)XP_003942108A0A2K6TNJ5
ENSSBOT00000038010PUF60-2051890XM_003942060ENSSBOP00000021175515 (aa)XP_003942109A0A2K6TNF7
ENSSBOT00000037951PUF60-2011635-ENSSBOP00000021116544 (aa)-A0A2K6TN81
ENSSBOT00000037966PUF60-2021575-ENSSBOP00000021131524 (aa)-A0A2K6TN95
Gene Model
Click here to download ENSSBOG00000027089's gene model file
Pathways
Pathway IDPathway NameSource
sbq03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027089's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSBOG00000027089PUF605235.294ENSSBOG00000023891U2AF26137.255
ENSSBOG00000027089PUF605334.586ENSSBOG00000022216PABPC17334.586
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSBOG00000027089PUF609997.921ENSG00000179950PUF6010098.450Homo_sapiens
ENSSBOG00000027089PUF609983.490ENSAPOG00000001713puf60b9984.091Acanthochromis_polyacanthus
ENSSBOG00000027089PUF609898.259ENSAMEG00000006406PUF609696.981Ailuropoda_melanoleuca
ENSSBOG00000027089PUF609784.069ENSACIG00000021705puf60b10084.069Amphilophus_citrinellus
ENSSBOG00000027089PUF609776.008ENSACIG00000003263-9976.628Amphilophus_citrinellus
ENSSBOG00000027089PUF609879.848ENSAOCG00000015558-9980.418Amphiprion_ocellaris
ENSSBOG00000027089PUF609983.490ENSAOCG00000005395puf60b10084.837Amphiprion_ocellaris
ENSSBOG00000027089PUF609673.810ENSAPEG00000001836-9975.098Amphiprion_percula
ENSSBOG00000027089PUF609781.213ENSAPEG00000011923puf60b9981.213Amphiprion_percula
ENSSBOG00000027089PUF609978.908ENSATEG00000006303-9980.000Anabas_testudineus
ENSSBOG00000027089PUF609883.871ENSATEG00000001730puf60b9983.902Anabas_testudineus
ENSSBOG00000027089PUF609896.935ENSAPLG00000010150PUF6010096.935Anas_platyrhynchos
ENSSBOG00000027089PUF609895.057ENSACAG00000001645PUF609993.855Anolis_carolinensis
ENSSBOG00000027089PUF609998.479ENSANAG00000018626PUF6010098.450Aotus_nancymaae
ENSSBOG00000027089PUF609784.069ENSACLG00000004462puf60b10084.069Astatotilapia_calliptera
ENSSBOG00000027089PUF609775.000ENSAMXG00000041030puf60b10075.422Astyanax_mexicanus
ENSSBOG00000027089PUF609883.205ENSAMXG00000036570puf60a9983.012Astyanax_mexicanus
ENSSBOG00000027089PUF609997.543ENSBTAG00000037493PUF609998.084Bos_taurus
ENSSBOG00000027089PUF607949.502WBGene00004389rnp-68650.000Caenorhabditis_elegans
ENSSBOG00000027089PUF609998.110ENSCJAG00000021485PUF609998.110Callithrix_jacchus
ENSSBOG00000027089PUF609897.656ENSCAFG00000001400PUF609795.933Canis_familiaris
ENSSBOG00000027089PUF609997.921ENSCAFG00020018754PUF609997.921Canis_lupus_dingo
ENSSBOG00000027089PUF609898.084ENSCHIG00000001618PUF608996.822Capra_hircus
ENSSBOG00000027089PUF609997.732ENSTSYG00000011912PUF6010098.450Carlito_syrichta
ENSSBOG00000027089PUF609892.586ENSCPOG00000014613PUF609989.369Cavia_porcellus
ENSSBOG00000027089PUF6010098.667ENSCCAG00000007744PUF6010098.667Cebus_capucinus
ENSSBOG00000027089PUF609997.921ENSCATG00000035405PUF609997.921Cercocebus_atys
ENSSBOG00000027089PUF609898.276ENSCLAG00000009154PUF609894.746Chinchilla_lanigera
ENSSBOG00000027089PUF609798.450ENSCSAG00000008878PUF6010098.450Chlorocebus_sabaeus
ENSSBOG00000027089PUF6010095.857ENSCPBG00000005595PUF6010095.857Chrysemys_picta_bellii
ENSSBOG00000027089PUF609849.522ENSCING00000008436-9850.484Ciona_intestinalis
ENSSBOG00000027089PUF605960.248ENSCING00000002156-8761.180Ciona_intestinalis
ENSSBOG00000027089PUF609550.301ENSCSAVG00000004765-9751.148Ciona_savignyi
ENSSBOG00000027089PUF609553.640ENSCSAVG00000001385-9954.038Ciona_savignyi
ENSSBOG00000027089PUF607997.094ENSCANG00000041843PUF6010098.082Colobus_angolensis_palliatus
ENSSBOG00000027089PUF609897.510ENSCGRG00001017442Puf609894.022Cricetulus_griseus_chok1gshd
ENSSBOG00000027089PUF609897.510ENSCGRG00000003717Puf609397.510Cricetulus_griseus_crigri
ENSSBOG00000027089PUF609982.584ENSCSEG00000019887puf60b9383.112Cynoglossus_semilaevis
ENSSBOG00000027089PUF609673.320ENSCSEG00000014845-8976.285Cynoglossus_semilaevis
ENSSBOG00000027089PUF608978.316ENSCVAG00000001560-9878.059Cyprinodon_variegatus
ENSSBOG00000027089PUF609783.301ENSCVAG00000009386puf60b10084.453Cyprinodon_variegatus
ENSSBOG00000027089PUF609777.444ENSDARG00000001241puf60b9996.032Danio_rerio
ENSSBOG00000027089PUF609785.822ENSDARG00000032175puf60a9994.043Danio_rerio
ENSSBOG00000027089PUF609582.643ENSDNOG00000043278PUF609877.477Dasypus_novemcinctus
ENSSBOG00000027089PUF609898.084ENSDORG00000004585Puf609796.822Dipodomys_ordii
ENSSBOG00000027089PUF609547.766FBgn0028577hfp9948.991Drosophila_melanogaster
ENSSBOG00000027089PUF609761.485ENSEBUG00000014291puf60b8464.860Eptatretus_burgeri
ENSSBOG00000027089PUF609371.162ENSEBUG00000005470-9565.505Eptatretus_burgeri
ENSSBOG00000027089PUF609997.921ENSEASG00005009695PUF609997.921Equus_asinus_asinus
ENSSBOG00000027089PUF609998.286ENSECAG00000024681PUF609898.286Equus_caballus
ENSSBOG00000027089PUF609881.939ENSELUG00000006507puf60b9978.938Esox_lucius
ENSSBOG00000027089PUF609982.868ENSELUG00000018443-9984.221Esox_lucius
ENSSBOG00000027089PUF609997.543ENSFCAG00000001045PUF6010098.062Felis_catus
ENSSBOG00000027089PUF609983.397ENSFALG00000001136PUF609985.524Ficedula_albicollis
ENSSBOG00000027089PUF609897.893ENSFDAG00000017177PUF609894.384Fukomys_damarensis
ENSSBOG00000027089PUF609982.176ENSFHEG00000020046puf60b10084.645Fundulus_heteroclitus
ENSSBOG00000027089PUF609377.711ENSFHEG00000021687PUF6010078.528Fundulus_heteroclitus
ENSSBOG00000027089PUF609870.301ENSGMOG00000006392puf60b10069.549Gadus_morhua
ENSSBOG00000027089PUF606496.221ENSGALG00000039901PUF609496.221Gallus_gallus
ENSSBOG00000027089PUF609777.992ENSGAFG00000004334-9977.445Gambusia_affinis
ENSSBOG00000027089PUF609981.426ENSGAFG00000021040puf60b10084.069Gambusia_affinis
ENSSBOG00000027089PUF609969.070ENSGACG00000001484-10069.112Gasterosteus_aculeatus
ENSSBOG00000027089PUF609971.536ENSGACG00000004717puf60b9970.865Gasterosteus_aculeatus
ENSSBOG00000027089PUF6010095.857ENSGAGG00000013289PUF609594.610Gopherus_agassizii
ENSSBOG00000027089PUF609997.921ENSGGOG00000004646PUF6010097.547Gorilla_gorilla
ENSSBOG00000027089PUF609982.739ENSHBUG00000015118puf60b10084.069Haplochromis_burtoni
ENSSBOG00000027089PUF609979.737ENSHBUG00000009634-10081.548Haplochromis_burtoni
ENSSBOG00000027089PUF609897.893ENSHGLG00000006111PUF609894.384Heterocephalus_glaber_female
ENSSBOG00000027089PUF609897.893ENSHGLG00100012362PUF609894.384Heterocephalus_glaber_male
ENSSBOG00000027089PUF609880.110ENSHCOG00000015541puf60b10080.258Hippocampus_comes
ENSSBOG00000027089PUF609567.530ENSHCOG00000000378-9965.714Hippocampus_comes
ENSSBOG00000027089PUF609781.096ENSIPUG00000002453puf60a9981.474Ictalurus_punctatus
ENSSBOG00000027089PUF609777.256ENSIPUG00000004660puf60b9977.024Ictalurus_punctatus
ENSSBOG00000027089PUF609898.276ENSSTOG00000025037PUF609697.009Ictidomys_tridecemlineatus
ENSSBOG00000027089PUF609897.893ENSJJAG00000001076Puf609894.374Jaculus_jaculus
ENSSBOG00000027089PUF609783.493ENSKMAG00000016745puf60b10084.645Kryptolebias_marmoratus
ENSSBOG00000027089PUF609776.938ENSKMAG00000010106-10076.938Kryptolebias_marmoratus
ENSSBOG00000027089PUF609883.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSSBOG00000027089PUF606988.798ENSLACG00000005456PUF6010088.525Latimeria_chalumnae
ENSSBOG00000027089PUF6010088.202ENSLOCG00000010106puf60b10087.079Lepisosteus_oculatus
ENSSBOG00000027089PUF609896.743ENSLAFG00000022929PUF609695.149Loxodonta_africana
ENSSBOG00000027089PUF609997.921ENSMFAG00000043373PUF609998.467Macaca_fascicularis
ENSSBOG00000027089PUF609997.921ENSMMUG00000013558PUF6010097.547Macaca_mulatta
ENSSBOG00000027089PUF609997.921ENSMNEG00000031099PUF609997.921Macaca_nemestrina
ENSSBOG00000027089PUF609798.450ENSMLEG00000040009PUF6010098.450Mandrillus_leucophaeus
ENSSBOG00000027089PUF609883.681ENSMAMG00000010394puf60b10082.243Mastacembelus_armatus
ENSSBOG00000027089PUF609980.488ENSMAMG00000019476-9980.645Mastacembelus_armatus
ENSSBOG00000027089PUF609979.925ENSMZEG00005019425-9980.835Maylandia_zebra
ENSSBOG00000027089PUF609784.069ENSMZEG00005018515puf60b10084.069Maylandia_zebra
ENSSBOG00000027089PUF609896.935ENSMGAG00000013070PUF609896.935Meleagris_gallopavo
ENSSBOG00000027089PUF609184.211ENSMAUG00000018549-9584.454Mesocricetus_auratus
ENSSBOG00000027089PUF606996.995ENSMAUG00000014267-9792.172Mesocricetus_auratus
ENSSBOG00000027089PUF609997.921ENSMICG00000012226PUF609998.467Microcebus_murinus
ENSSBOG00000027089PUF609897.701ENSMOCG00000018780Puf609994.203Microtus_ochrogaster
ENSSBOG00000027089PUF609873.973ENSMMOG00000018059-9976.659Mola_mola
ENSSBOG00000027089PUF609784.261ENSMMOG00000004217puf60b10084.261Mola_mola
ENSSBOG00000027089PUF609897.701ENSMODG00000009161PUF609597.706Monodelphis_domestica
ENSSBOG00000027089PUF609878.462ENSMALG00000006797puf60b9978.503Monopterus_albus
ENSSBOG00000027089PUF609979.699ENSMALG00000000200-9979.206Monopterus_albus
ENSSBOG00000027089PUF609897.510MGP_CAROLIEiJ_G0019910Puf609894.022Mus_caroli
ENSSBOG00000027089PUF609897.510ENSMUSG00000002524Puf609894.022Mus_musculus
ENSSBOG00000027089PUF609897.510MGP_PahariEiJ_G0019920Puf609894.022Mus_pahari
ENSSBOG00000027089PUF609897.510MGP_SPRETEiJ_G0020812Puf609894.022Mus_spretus
ENSSBOG00000027089PUF609898.084ENSMPUG00000008137PUF609596.822Mustela_putorius_furo
ENSSBOG00000027089PUF609897.318ENSMLUG00000000238-9696.075Myotis_lucifugus
ENSSBOG00000027089PUF609793.861ENSMLUG00000013032-9893.861Myotis_lucifugus
ENSSBOG00000027089PUF609897.893ENSNGAG00000000712Puf6010097.868Nannospalax_galili
ENSSBOG00000027089PUF609980.113ENSNBRG00000017223-9980.989Neolamprologus_brichardi
ENSSBOG00000027089PUF607982.588ENSNBRG00000013047puf60b9782.588Neolamprologus_brichardi
ENSSBOG00000027089PUF609997.547ENSNLEG00000002156PUF6010097.547Nomascus_leucogenys
ENSSBOG00000027089PUF607297.270ENSOPRG00000002147PUF607597.270Ochotona_princeps
ENSSBOG00000027089PUF609574.104ENSODEG00000015513-9673.581Octodon_degus
ENSSBOG00000027089PUF6071100.000ENSODEG00000014024-97100.000Octodon_degus
ENSSBOG00000027089PUF609883.302ENSONIG00000006247puf60b9983.333Oreochromis_niloticus
ENSSBOG00000027089PUF609880.835ENSONIG00000014030-9981.061Oreochromis_niloticus
ENSSBOG00000027089PUF609679.447ENSOANG00000006962PUF6010078.516Ornithorhynchus_anatinus
ENSSBOG00000027089PUF609777.273ENSORLG00000028655-9977.376Oryzias_latipes
ENSSBOG00000027089PUF609982.739ENSORLG00000012279puf60b10083.493Oryzias_latipes
ENSSBOG00000027089PUF609982.739ENSORLG00020007333puf6010083.493Oryzias_latipes_hni
ENSSBOG00000027089PUF609976.493ENSORLG00020018144-9977.024Oryzias_latipes_hni
ENSSBOG00000027089PUF609976.723ENSORLG00015016833-9976.822Oryzias_latipes_hsok
ENSSBOG00000027089PUF609981.869ENSORLG00015007718puf60b10083.365Oryzias_latipes_hsok
ENSSBOG00000027089PUF609977.486ENSOMEG00000022185-9977.925Oryzias_melastigma
ENSSBOG00000027089PUF609979.412ENSOMEG00000001643puf60b9981.616Oryzias_melastigma
ENSSBOG00000027089PUF609898.276ENSOGAG00000006259PUF609697.009Otolemur_garnettii
ENSSBOG00000027089PUF609995.429ENSOARG00000016235PUF609996.718Ovis_aries
ENSSBOG00000027089PUF609997.921ENSPPAG00000029933PUF609998.282Pan_paniscus
ENSSBOG00000027089PUF609997.543ENSPPRG00000003257PUF6010098.062Panthera_pardus
ENSSBOG00000027089PUF609897.266ENSPTIG00000009795PUF609995.977Panthera_tigris_altaica
ENSSBOG00000027089PUF609997.358ENSPTRG00000043963-10097.358Pan_troglodytes
ENSSBOG00000027089PUF609997.732ENSPTRG00000020670PUF609998.092Pan_troglodytes
ENSSBOG00000027089PUF609997.921ENSPANG00000021936PUF609997.921Papio_anubis
ENSSBOG00000027089PUF609985.150ENSPKIG00000012204puf60b10086.538Paramormyrops_kingsleyae
ENSSBOG00000027089PUF6010083.829ENSPKIG00000004295puf60a9990.294Paramormyrops_kingsleyae
ENSSBOG00000027089PUF609896.743ENSPSIG00000004679PUF6010096.015Pelodiscus_sinensis
ENSSBOG00000027089PUF609783.015ENSPMGG00000013444puf60b9983.015Periophthalmus_magnuspinnatus
ENSSBOG00000027089PUF609897.701ENSPEMG00000008820Puf609894.203Peromyscus_maniculatus_bairdii
ENSSBOG00000027089PUF609997.714ENSPCIG00000020270PUF609998.081Phascolarctos_cinereus
ENSSBOG00000027089PUF609982.176ENSPFOG00000019217puf60b9983.236Poecilia_formosa
ENSSBOG00000027089PUF609977.966ENSPFOG00000011118-9978.748Poecilia_formosa
ENSSBOG00000027089PUF609977.966ENSPLAG00000017025-9277.925Poecilia_latipinna
ENSSBOG00000027089PUF609783.493ENSPLAG00000010754puf60b10084.645Poecilia_latipinna
ENSSBOG00000027089PUF609977.966ENSPMEG00000009767-9278.302Poecilia_mexicana
ENSSBOG00000027089PUF609982.176ENSPMEG00000000838puf60b10084.645Poecilia_mexicana
ENSSBOG00000027089PUF609978.976ENSPREG00000005440puf60b10082.341Poecilia_reticulata
ENSSBOG00000027089PUF607896.403ENSPPYG00000018951-9596.403Pongo_abelii
ENSSBOG00000027089PUF607897.842ENSPCAG00000014837PUF6010097.842Procavia_capensis
ENSSBOG00000027089PUF609997.732ENSPCOG00000027981PUF609998.276Propithecus_coquereli
ENSSBOG00000027089PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSSBOG00000027089PUF609979.925ENSPNYG00000004273-9980.835Pundamilia_nyererei
ENSSBOG00000027089PUF609784.069ENSPNYG00000002556puf60b10084.069Pundamilia_nyererei
ENSSBOG00000027089PUF609783.789ENSPNAG00000019909puf60a9983.594Pygocentrus_nattereri
ENSSBOG00000027089PUF609678.600ENSPNAG00000019415puf60b9672.482Pygocentrus_nattereri
ENSSBOG00000027089PUF609897.510ENSRNOG00000009960Puf6010092.895Rattus_norvegicus
ENSSBOG00000027089PUF609997.921ENSRBIG00000035274PUF6010097.547Rhinopithecus_bieti
ENSSBOG00000027089PUF609997.921ENSRROG00000029360PUF6010097.538Rhinopithecus_roxellana
ENSSBOG00000027089PUF608897.447ENSSHAG00000006668PUF609296.258Sarcophilus_harrisii
ENSSBOG00000027089PUF609384.818ENSSFOG00015019619puf60b9984.818Scleropages_formosus
ENSSBOG00000027089PUF609880.435ENSSFOG00015019371puf60a9885.714Scleropages_formosus
ENSSBOG00000027089PUF607491.349ENSSMAG00000016381puf60b7889.508Scophthalmus_maximus
ENSSBOG00000027089PUF609978.113ENSSDUG00000007048-9978.302Seriola_dumerili
ENSSBOG00000027089PUF609880.891ENSSDUG00000009935puf60b10082.004Seriola_dumerili
ENSSBOG00000027089PUF609884.030ENSSLDG00000024011puf60b10082.430Seriola_lalandi_dorsalis
ENSSBOG00000027089PUF609778.897ENSSLDG00000007366-9979.317Seriola_lalandi_dorsalis
ENSSBOG00000027089PUF606583.237ENSSPUG00000013518PUF609483.526Sphenodon_punctatus
ENSSBOG00000027089PUF609980.256ENSSPAG00000012144puf60b10082.617Stegastes_partitus
ENSSBOG00000027089PUF609780.534ENSSPAG00000020285-10081.107Stegastes_partitus
ENSSBOG00000027089PUF609896.975ENSSSCG00000038800PUF609897.624Sus_scrofa
ENSSBOG00000027089PUF609893.678ENSTGUG00000012797-10093.678Taeniopygia_guttata
ENSSBOG00000027089PUF609678.357ENSTRUG00000008843-10078.758Takifugu_rubripes
ENSSBOG00000027089PUF609882.732ENSTRUG00000005420puf60b10081.308Takifugu_rubripes
ENSSBOG00000027089PUF609875.479ENSTNIG00000003069-10076.482Tetraodon_nigroviridis
ENSSBOG00000027089PUF609882.732ENSTNIG00000013675puf60b10082.576Tetraodon_nigroviridis
ENSSBOG00000027089PUF607882.111ENSTBEG00000001899-10082.405Tupaia_belangeri
ENSSBOG00000027089PUF606093.581ENSTBEG00000002751-9993.559Tupaia_belangeri
ENSSBOG00000027089PUF609797.864ENSTTRG00000017088PUF6010097.864Tursiops_truncatus
ENSSBOG00000027089PUF609997.921ENSUAMG00000024917PUF609997.921Ursus_americanus
ENSSBOG00000027089PUF609894.605ENSUMAG00000000272PUF609891.423Ursus_maritimus
ENSSBOG00000027089PUF609898.467ENSVVUG00000022527PUF6010098.450Vulpes_vulpes
ENSSBOG00000027089PUF609892.734ENSXETG00000012469puf609993.241Xenopus_tropicalis
ENSSBOG00000027089PUF609682.937ENSXCOG00000012355puf60b10084.127Xiphophorus_couchianus
ENSSBOG00000027089PUF609982.176ENSXMAG00000001862puf60b10084.645Xiphophorus_maculatus
ENSSBOG00000027089PUF609878.320ENSXMAG00000010507-10077.539Xiphophorus_maculatus

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