EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000027169 (Gene tree)
Gene ID: 101035757
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 59009 bases
Position: chrJH378121.1:28076775-28135783
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000021397	MBD	PF01429.19	3.6e-16	1	1
ENSSBOP00000021402	MBD	PF01429.19	4e-16	1	1
ENSSBOP00000021385	MBD	PF01429.19	4.1e-16	1	1
ENSSBOP00000021383	MBD	PF01429.19	4.2e-16	1	1
ENSSBOP00000021243	MBD	PF01429.19	4.5e-16	1	1
ENSSBOP00000021225	MBD	PF01429.19	4.5e-16	1	1
ENSSBOP00000021349	MBD	PF01429.19	4.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000038061	MBD1-201	2550	-	ENSSBOP00000021225	757 (aa)	-	A0A2K6TNK5
ENSSBOT00000038185	MBD1-203	1968	XM_010336809	ENSSBOP00000021349	655 (aa)	XP_010335111	A0A2K6TNX9
ENSSBOT00000038079	MBD1-202	2775	XM_003926121	ENSSBOP00000021243	756 (aa)	XP_003926170	A0A2K6TNK4
ENSSBOT00000038233	MBD1-206	1635	-	ENSSBOP00000021397	545 (aa)	-	A0A2K6TP72
ENSSBOT00000038218	MBD1-204	1830	-	ENSSBOP00000021383	609 (aa)	-	A0A2K6TNZ3
ENSSBOT00000038238	MBD1-207	1725	XM_010336824	ENSSBOP00000021402	574 (aa)	XP_010335126	A0A2K6TP76
ENSSBOT00000038221	MBD1-205	1821	-	ENSSBOP00000021385	606 (aa)	-	A0A2K6TP12
ENSSBOT00000038243	MBD1-208	2261	XM_003926073	ENSSBOP00000021407	514 (aa)	XP_003926122	A0A2K6TP82

Gene Model

Click here to download ENSSBOG00000027169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027169	MBD1	100	95.878	ENSG00000141644	MBD1	100	95.878	Homo_sapiens
ENSSBOG00000027169	MBD1	90	83.360	ENSAMEG00000000238	MBD1	97	84.485	Ailuropoda_melanoleuca
ENSSBOG00000027169	MBD1	70	45.545	ENSACAG00000006091	-	100	44.802	Anolis_carolinensis
ENSSBOG00000027169	MBD1	100	97.405	ENSANAG00000036253	MBD1	100	97.405	Aotus_nancymaae
ENSSBOG00000027169	MBD1	91	89.803	ENSBTAG00000003801	MBD1	98	87.015	Bos_taurus
ENSSBOG00000027169	MBD1	100	97.252	ENSCJAG00000004959	MBD1	100	97.819	Callithrix_jacchus
ENSSBOG00000027169	MBD1	100	80.916	ENSCAFG00000018928	MBD1	97	84.923	Canis_familiaris
ENSSBOG00000027169	MBD1	99	75.281	ENSCAFG00020024272	MBD1	97	84.277	Canis_lupus_dingo
ENSSBOG00000027169	MBD1	100	76.825	ENSCHIG00000021134	MBD1	98	87.015	Capra_hircus
ENSSBOG00000027169	MBD1	100	89.924	ENSTSYG00000000509	MBD1	100	89.924	Carlito_syrichta
ENSSBOG00000027169	MBD1	99	69.081	ENSCAPG00000015782	MBD1	96	69.081	Cavia_aperea
ENSSBOG00000027169	MBD1	92	72.205	ENSCPOG00000001671	MBD1	98	73.549	Cavia_porcellus
ENSSBOG00000027169	MBD1	100	96.696	ENSCCAG00000034600	MBD1	100	96.696	Cebus_capucinus
ENSSBOG00000027169	MBD1	100	95.819	ENSCATG00000029959	MBD1	100	95.819	Cercocebus_atys
ENSSBOG00000027169	MBD1	100	75.556	ENSCLAG00000007457	MBD1	93	83.804	Chinchilla_lanigera
ENSSBOG00000027169	MBD1	90	96.453	ENSCSAG00000018070	MBD1	98	96.453	Chlorocebus_sabaeus
ENSSBOG00000027169	MBD1	100	94.150	ENSCANG00000033425	MBD1	100	94.393	Colobus_angolensis_palliatus
ENSSBOG00000027169	MBD1	92	73.510	ENSCGRG00001014843	Mbd1	98	74.161	Cricetulus_griseus_chok1gshd
ENSSBOG00000027169	MBD1	99	62.257	ENSCGRG00000014135	Mbd1	96	62.081	Cricetulus_griseus_crigri
ENSSBOG00000027169	MBD1	100	74.010	ENSDNOG00000015998	MBD1	100	81.804	Dasypus_novemcinctus
ENSSBOG00000027169	MBD1	99	75.088	ENSDORG00000013917	Mbd1	96	79.268	Dipodomys_ordii
ENSSBOG00000027169	MBD1	100	85.693	ENSEASG00005003857	MBD1	100	87.367	Equus_asinus_asinus
ENSSBOG00000027169	MBD1	97	81.301	ENSECAG00000011497	MBD1	91	82.466	Equus_caballus
ENSSBOG00000027169	MBD1	100	86.454	ENSFCAG00000015730	MBD1	100	86.910	Felis_catus
ENSSBOG00000027169	MBD1	99	79.965	ENSFDAG00000011085	MBD1	95	80.660	Fukomys_damarensis
ENSSBOG00000027169	MBD1	51	52.174	ENSGAFG00000008975	mbd1b	50	37.640	Gambusia_affinis
ENSSBOG00000027169	MBD1	70	32.170	ENSGACG00000012106	-	58	33.149	Gasterosteus_aculeatus
ENSSBOG00000027169	MBD1	100	95.420	ENSGGOG00000016966	MBD1	100	95.420	Gorilla_gorilla
ENSSBOG00000027169	MBD1	91	86.074	ENSHGLG00000008740	MBD1	99	86.074	Heterocephalus_glaber_female
ENSSBOG00000027169	MBD1	100	80.314	ENSHGLG00100005198	MBD1	100	84.953	Heterocephalus_glaber_male
ENSSBOG00000027169	MBD1	63	38.650	ENSIPUG00000015243	-	50	36.905	Ictalurus_punctatus
ENSSBOG00000027169	MBD1	92	81.892	ENSSTOG00000007780	MBD1	98	83.056	Ictidomys_tridecemlineatus
ENSSBOG00000027169	MBD1	98	75.532	ENSJJAG00000022859	Mbd1	96	75.532	Jaculus_jaculus
ENSSBOG00000027169	MBD1	74	33.803	ENSKMAG00000020760	mbd1b	50	30.392	Kryptolebias_marmoratus
ENSSBOG00000027169	MBD1	88	35.791	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSSBOG00000027169	MBD1	98	69.778	ENSLAFG00000031328	MBD1	98	75.041	Loxodonta_africana
ENSSBOG00000027169	MBD1	100	95.470	ENSMFAG00000026335	MBD1	100	95.470	Macaca_fascicularis
ENSSBOG00000027169	MBD1	100	93.967	ENSMMUG00000009050	MBD1	100	94.237	Macaca_mulatta
ENSSBOG00000027169	MBD1	100	95.470	ENSMNEG00000038822	MBD1	100	95.470	Macaca_nemestrina
ENSSBOG00000027169	MBD1	100	95.819	ENSMLEG00000043121	MBD1	100	95.819	Mandrillus_leucophaeus
ENSSBOG00000027169	MBD1	69	37.288	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSSBOG00000027169	MBD1	99	89.134	ENSMICG00000006414	MBD1	100	88.889	Microcebus_murinus
ENSSBOG00000027169	MBD1	52	72.438	ENSMOCG00000011976	-	100	72.438	Microtus_ochrogaster
ENSSBOG00000027169	MBD1	72	43.902	ENSMODG00000001286	-	58	43.659	Monodelphis_domestica
ENSSBOG00000027169	MBD1	99	60.368	ENSMUSG00000024561	Mbd1	97	66.826	Mus_musculus
ENSSBOG00000027169	MBD1	99	61.525	MGP_PahariEiJ_G0019128	Mbd1	98	67.370	Mus_pahari
ENSSBOG00000027169	MBD1	97	62.437	MGP_SPRETEiJ_G0023304	Mbd1	99	68.506	Mus_spretus
ENSSBOG00000027169	MBD1	100	77.215	ENSMPUG00000008843	MBD1	98	85.780	Mustela_putorius_furo
ENSSBOG00000027169	MBD1	100	75.238	ENSMLUG00000008286	MBD1	98	83.129	Myotis_lucifugus
ENSSBOG00000027169	MBD1	98	72.348	ENSNGAG00000011412	Mbd1	96	72.348	Nannospalax_galili
ENSSBOG00000027169	MBD1	100	94.809	ENSNLEG00000011661	-	100	94.809	Nomascus_leucogenys
ENSSBOG00000027169	MBD1	98	82.531	ENSNLEG00000032711	-	100	79.310	Nomascus_leucogenys
ENSSBOG00000027169	MBD1	97	70.455	ENSOPRG00000007647	MBD1	98	74.324	Ochotona_princeps
ENSSBOG00000027169	MBD1	99	77.739	ENSODEG00000018451	MBD1	97	81.106	Octodon_degus
ENSSBOG00000027169	MBD1	93	46.516	ENSOANG00000014593	-	100	46.542	Ornithorhynchus_anatinus
ENSSBOG00000027169	MBD1	100	74.762	ENSOCUG00000006554	MBD1	100	82.426	Oryctolagus_cuniculus
ENSSBOG00000027169	MBD1	100	77.812	ENSOGAG00000003784	MBD1	99	83.756	Otolemur_garnettii
ENSSBOG00000027169	MBD1	100	76.266	ENSOARG00000004218	MBD1	95	84.080	Ovis_aries
ENSSBOG00000027169	MBD1	100	95.645	ENSPPAG00000038886	MBD1	100	95.645	Pan_paniscus
ENSSBOG00000027169	MBD1	100	85.930	ENSPPRG00000021387	MBD1	100	86.384	Panthera_pardus
ENSSBOG00000027169	MBD1	100	86.454	ENSPTIG00000021231	MBD1	100	86.910	Panthera_tigris_altaica
ENSSBOG00000027169	MBD1	100	95.645	ENSPTRG00000010021	MBD1	100	95.645	Pan_troglodytes
ENSSBOG00000027169	MBD1	100	95.878	ENSPANG00000010867	MBD1	100	95.878	Papio_anubis
ENSSBOG00000027169	MBD1	99	62.457	ENSPEMG00000022630	Mbd1	97	62.457	Peromyscus_maniculatus_bairdii
ENSSBOG00000027169	MBD1	81	60.606	ENSPCIG00000027937	-	79	47.213	Phascolarctos_cinereus
ENSSBOG00000027169	MBD1	57	52.308	ENSPMEG00000024145	mbd1b	50	36.517	Poecilia_mexicana
ENSSBOG00000027169	MBD1	90	96.284	ENSPPYG00000009158	MBD1	89	96.284	Pongo_abelii
ENSSBOG00000027169	MBD1	85	86.364	ENSPCAG00000001648	MBD1	93	82.482	Procavia_capensis
ENSSBOG00000027169	MBD1	99	90.840	ENSPCOG00000012450	MBD1	100	91.111	Propithecus_coquereli
ENSSBOG00000027169	MBD1	99	50.853	ENSRNOG00000024104	Mbd1	98	58.416	Rattus_norvegicus
ENSSBOG00000027169	MBD1	100	86.934	ENSRBIG00000041294	MBD1	98	95.396	Rhinopithecus_bieti
ENSSBOG00000027169	MBD1	100	91.289	ENSRROG00000032517	MBD1	100	94.237	Rhinopithecus_roxellana
ENSSBOG00000027169	MBD1	85	47.009	ENSSHAG00000003661	-	100	47.872	Sarcophilus_harrisii
ENSSBOG00000027169	MBD1	58	34.764	ENSSPAG00000021447	mbd1b	51	37.791	Stegastes_partitus
ENSSBOG00000027169	MBD1	97	83.333	ENSSSCG00000004516	MBD1	98	85.642	Sus_scrofa
ENSSBOG00000027169	MBD1	76	30.805	ENSTRUG00000013422	mbd1b	50	31.358	Takifugu_rubripes
ENSSBOG00000027169	MBD1	67	83.691	ENSTBEG00000012651	-	68	82.917	Tupaia_belangeri
ENSSBOG00000027169	MBD1	90	84.512	ENSTTRG00000015523	MBD1	98	85.185	Tursiops_truncatus
ENSSBOG00000027169	MBD1	91	89.644	ENSUAMG00000004752	MBD1	98	82.799	Ursus_americanus
ENSSBOG00000027169	MBD1	90	87.037	ENSUMAG00000002947	MBD1	98	87.542	Ursus_maritimus