EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000027228 (Gene tree)
Gene ID: 101041990
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 85403 bases
Position: chrJH378169.1:344158-429560
Accession: 20368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000021376	zf-CCCH	PF00642.24	9.5e-07	1	1
ENSSBOP00000021363	zf-CCCH	PF00642.24	9.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000038199	ZC3H13-201	6793	XM_003934357	ENSSBOP00000021363	1666 (aa)	XP_003934406	A0A2K6TNX5
ENSSBOT00000038212	ZC3H13-202	4944	-	ENSSBOP00000021376	1647 (aa)	-	A0A2K6TNY7

Gene Model

Click here to download ENSSBOG00000027228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027228	ZC3H13	100	97.305	ENSG00000123200	ZC3H13	100	97.305	Homo_sapiens
ENSSBOG00000027228	ZC3H13	75	80.640	ENSAPLG00000002707	ZC3H13	65	80.828	Anas_platyrhynchos
ENSSBOG00000027228	ZC3H13	100	98.681	ENSANAG00000033079	ZC3H13	100	98.681	Aotus_nancymaae
ENSSBOG00000027228	ZC3H13	100	98.322	ENSCJAG00000016756	ZC3H13	100	98.322	Callithrix_jacchus
ENSSBOG00000027228	ZC3H13	100	97.066	ENSCATG00000041075	ZC3H13	100	97.066	Cercocebus_atys
ENSSBOG00000027228	ZC3H13	100	97.068	ENSCSAG00000017764	ZC3H13	100	97.068	Chlorocebus_sabaeus
ENSSBOG00000027228	ZC3H13	88	94.690	ENSCHOG00000009724	ZC3H13	65	94.690	Choloepus_hoffmanni
ENSSBOG00000027228	ZC3H13	100	97.187	ENSCANG00000037422	ZC3H13	100	97.187	Colobus_angolensis_palliatus
ENSSBOG00000027228	ZC3H13	53	79.886	ENSCGRG00001014490	Zc3h13	50	79.797	Cricetulus_griseus_chok1gshd
ENSSBOG00000027228	ZC3H13	53	79.977	ENSCGRG00000002575	Zc3h13	50	79.887	Cricetulus_griseus_crigri
ENSSBOG00000027228	ZC3H13	53	86.667	ENSECAG00000022843	ZC3H13	54	86.893	Equus_caballus
ENSSBOG00000027228	ZC3H13	69	60.632	ENSGACG00000015166	zc3h13	58	53.497	Gasterosteus_aculeatus
ENSSBOG00000027228	ZC3H13	100	96.886	ENSGGOG00000005496	ZC3H13	100	96.886	Gorilla_gorilla
ENSSBOG00000027228	ZC3H13	52	44.207	ENSKMAG00000010701	zc3h13	61	45.822	Kryptolebias_marmoratus
ENSSBOG00000027228	ZC3H13	52	58.140	ENSLACG00000003806	ZC3H13	58	63.881	Latimeria_chalumnae
ENSSBOG00000027228	ZC3H13	100	97.066	ENSMFAG00000004060	ZC3H13	100	97.066	Macaca_fascicularis
ENSSBOG00000027228	ZC3H13	100	97.066	ENSMMUG00000017025	ZC3H13	100	97.066	Macaca_mulatta
ENSSBOG00000027228	ZC3H13	100	97.006	ENSMNEG00000044356	ZC3H13	100	97.006	Macaca_nemestrina
ENSSBOG00000027228	ZC3H13	100	93.713	ENSMLEG00000039387	ZC3H13	100	93.713	Mandrillus_leucophaeus
ENSSBOG00000027228	ZC3H13	53	90.600	ENSMICG00000014772	ZC3H13	53	90.600	Microcebus_murinus
ENSSBOG00000027228	ZC3H13	53	80.204	MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.158	Mus_caroli
ENSSBOG00000027228	ZC3H13	53	79.977	ENSMUSG00000022000	Zc3h13	50	79.932	Mus_musculus
ENSSBOG00000027228	ZC3H13	53	80.090	MGP_PahariEiJ_G0030530	Zc3h13	50	79.820	Mus_pahari
ENSSBOG00000027228	ZC3H13	53	79.977	MGP_SPRETEiJ_G0020407	Zc3h13	51	79.932	Mus_spretus
ENSSBOG00000027228	ZC3H13	100	96.946	ENSNLEG00000002498	ZC3H13	100	96.946	Nomascus_leucogenys
ENSSBOG00000027228	ZC3H13	69	58.788	ENSOMEG00000007044	zc3h13	55	58.687	Oryzias_melastigma
ENSSBOG00000027228	ZC3H13	53	86.538	ENSOGAG00000012032	ZC3H13	52	86.878	Otolemur_garnettii
ENSSBOG00000027228	ZC3H13	53	84.050	ENSPTIG00000014867	ZC3H13	53	83.597	Panthera_tigris_altaica
ENSSBOG00000027228	ZC3H13	100	97.365	ENSPTRG00000005851	ZC3H13	100	97.365	Pan_troglodytes
ENSSBOG00000027228	ZC3H13	100	96.228	ENSPANG00000014127	ZC3H13	100	96.228	Papio_anubis
ENSSBOG00000027228	ZC3H13	78	97.177	ENSPCAG00000001146	ZC3H13	77	95.161	Procavia_capensis
ENSSBOG00000027228	ZC3H13	64	97.315	ENSPVAG00000012353	ZC3H13	63	97.315	Pteropus_vampyrus
ENSSBOG00000027228	ZC3H13	100	96.707	ENSRBIG00000010463	ZC3H13	100	96.707	Rhinopithecus_bieti
ENSSBOG00000027228	ZC3H13	68	54.853	ENSTNIG00000014523	zc3h13	55	56.506	Tetraodon_nigroviridis
ENSSBOG00000027228	ZC3H13	84	90.909	ENSVPAG00000005179	ZC3H13	79	97.345	Vicugna_pacos