EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSBOG00000027263 (Gene tree)
Gene ID
101042576
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Saimiri_boliviensis_boliviensis
Status
putative
Strand
Minus strand
Length
51418 bases
Position
chrJH378126.1:23857347-23908764
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSBOP00000021471CPSF73-100_CPF11718.87.6e-4211
ENSSBOP00000021471Beta-CaspPF10996.86.4e-3411
ENSSBOP00000021471Lactamase_BPF00753.271.6e-1811
ENSSBOP00000021471RMMBLPF07521.121.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSBOT00000038307CPSF3-2012058XM_010337978ENSSBOP00000021471685 (aa)XP_010336280A0A2K6TP83
Gene Model
Click here to download ENSSBOG00000027263's gene model file
Pathways
Pathway IDPathway NameSource
sbq03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027263's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSBOG00000027263CPSF36440.089ENSSBOG00000018848INTS117339.955
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSBOG00000027263CPSF310093.478ENSG00000119203CPSF3100100.000Homo_sapiens
ENSSBOG00000027263CPSF39781.654ENSAPOG00000022087cpsf39681.654Acanthochromis_polyacanthus
ENSSBOG00000027263CPSF36698.226ENSAPOG00000012241CPSF38298.226Acanthochromis_polyacanthus
ENSSBOG00000027263CPSF310093.188ENSAMEG00000008493CPSF310093.188Ailuropoda_melanoleuca
ENSSBOG00000027263CPSF39282.808ENSACIG00000023663CPSF39982.808Amphilophus_citrinellus
ENSSBOG00000027263CPSF39178.639ENSACIG00000009846cpsf39978.639Amphilophus_citrinellus
ENSSBOG00000027263CPSF39784.328ENSAOCG00000010077CPSF39684.328Amphiprion_ocellaris
ENSSBOG00000027263CPSF39781.654ENSAOCG00000022056cpsf39187.108Amphiprion_ocellaris
ENSSBOG00000027263CPSF39781.654ENSAPEG00000019526cpsf39681.654Amphiprion_percula
ENSSBOG00000027263CPSF39784.328ENSAPEG00000021167CPSF39981.388Amphiprion_percula
ENSSBOG00000027263CPSF39781.504ENSATEG00000003959cpsf39979.140Anabas_testudineus
ENSSBOG00000027263CPSF39779.671ENSATEG00000014525CPSF39679.671Anabas_testudineus
ENSSBOG00000027263CPSF39791.754ENSAPLG00000006941CPSF39891.754Anas_platyrhynchos
ENSSBOG00000027263CPSF39288.576ENSACAG00000001759CPSF39988.576Anolis_carolinensis
ENSSBOG00000027263CPSF310086.957ENSANAG00000031254CPSF39989.121Aotus_nancymaae
ENSSBOG00000027263CPSF39282.650ENSACLG00000018846CPSF39982.650Astatotilapia_calliptera
ENSSBOG00000027263CPSF39781.764ENSACLG00000014484cpsf39981.764Astatotilapia_calliptera
ENSSBOG00000027263CPSF39784.535ENSAMXG00000004786cpsf39981.558Astyanax_mexicanus
ENSSBOG00000027263CPSF310093.333ENSBTAG00000019735CPSF310093.333Bos_taurus
ENSSBOG00000027263CPSF38958.054WBGene00013460cpsf-38758.054Caenorhabditis_elegans
ENSSBOG00000027263CPSF310093.478ENSCJAG00000006276CPSF310093.478Callithrix_jacchus
ENSSBOG00000027263CPSF310093.188ENSCAFG00000003375CPSF39593.188Canis_familiaris
ENSSBOG00000027263CPSF39193.120ENSCAFG00020026799CPSF310093.120Canis_lupus_dingo
ENSSBOG00000027263CPSF310093.333ENSCHIG00000013973CPSF310093.333Capra_hircus
ENSSBOG00000027263CPSF310093.478ENSTSYG00000002967CPSF310093.478Carlito_syrichta
ENSSBOG00000027263CPSF39793.294ENSCAPG00000013851CPSF310093.294Cavia_aperea
ENSSBOG00000027263CPSF310091.594ENSCPOG00000011299CPSF310091.594Cavia_porcellus
ENSSBOG00000027263CPSF310093.623ENSCCAG00000036730CPSF39995.380Cebus_capucinus
ENSSBOG00000027263CPSF310091.172ENSCATG00000014770CPSF39992.675Cercocebus_atys
ENSSBOG00000027263CPSF310091.159ENSCLAG00000002727CPSF310091.159Chinchilla_lanigera
ENSSBOG00000027263CPSF310086.087ENSCSAG00000007125CPSF310086.087Chlorocebus_sabaeus
ENSSBOG00000027263CPSF375100.000ENSCHOG00000000180CPSF37487.000Choloepus_hoffmanni
ENSSBOG00000027263CPSF39791.194ENSCPBG00000014074CPSF39691.194Chrysemys_picta_bellii
ENSSBOG00000027263CPSF39765.872ENSCING00000007214-9665.872Ciona_intestinalis
ENSSBOG00000027263CPSF310080.435ENSCANG00000034435CPSF310080.435Colobus_angolensis_palliatus
ENSSBOG00000027263CPSF310092.609ENSCGRG00001013134Cpsf310092.609Cricetulus_griseus_chok1gshd
ENSSBOG00000027263CPSF310092.609ENSCGRG00000018319Cpsf310092.609Cricetulus_griseus_crigri
ENSSBOG00000027263CPSF39783.607ENSCSEG00000002021CPSF39983.103Cynoglossus_semilaevis
ENSSBOG00000027263CPSF39784.627ENSCVAG00000015067CPSF39684.627Cyprinodon_variegatus
ENSSBOG00000027263CPSF39785.586ENSDARG00000027649cpsf39685.586Danio_rerio
ENSSBOG00000027263CPSF310091.606ENSDNOG00000008940CPSF39591.606Dasypus_novemcinctus
ENSSBOG00000027263CPSF39592.542ENSDORG00000014263Cpsf310092.542Dipodomys_ordii
ENSSBOG00000027263CPSF39765.564FBgn0261065Cpsf739665.564Drosophila_melanogaster
ENSSBOG00000027263CPSF38983.306ENSETEG00000003893CPSF39483.306Echinops_telfairi
ENSSBOG00000027263CPSF39775.620ENSEBUG00000009018cpsf39675.766Eptatretus_burgeri
ENSSBOG00000027263CPSF310093.188ENSEASG00005003970CPSF310093.188Equus_asinus_asinus
ENSSBOG00000027263CPSF310093.188ENSECAG00000019911CPSF310093.188Equus_caballus
ENSSBOG00000027263CPSF310077.971ENSEEUG00000015422CPSF310077.971Erinaceus_europaeus
ENSSBOG00000027263CPSF39784.305ENSELUG00000013775cpsf39981.377Esox_lucius
ENSSBOG00000027263CPSF310093.333ENSFCAG00000007852CPSF310094.931Felis_catus
ENSSBOG00000027263CPSF39491.190ENSFALG00000006572CPSF310091.190Ficedula_albicollis
ENSSBOG00000027263CPSF39990.988ENSFDAG00000006317CPSF39990.988Fukomys_damarensis
ENSSBOG00000027263CPSF35963.171ENSFHEG00000012186CPSF39963.171Fundulus_heteroclitus
ENSSBOG00000027263CPSF39781.353ENSFHEG00000014774cpsf39681.353Fundulus_heteroclitus
ENSSBOG00000027263CPSF39782.537ENSGMOG00000003157cpsf39682.537Gadus_morhua
ENSSBOG00000027263CPSF39791.004ENSGALG00000016424CPSF39990.551Gallus_gallus
ENSSBOG00000027263CPSF39178.855ENSGAFG00000019449cpsf39978.855Gambusia_affinis
ENSSBOG00000027263CPSF39784.454ENSGAFG00000008016CPSF39684.454Gambusia_affinis
ENSSBOG00000027263CPSF36887.049ENSGAGG00000025583CPSF39387.049Gopherus_agassizii
ENSSBOG00000027263CPSF310091.348ENSGGOG00000001757CPSF310095.149Gorilla_gorilla
ENSSBOG00000027263CPSF35975.795ENSHBUG00000014332CPSF39975.795Haplochromis_burtoni
ENSSBOG00000027263CPSF39781.764ENSHBUG00000001188cpsf39979.114Haplochromis_burtoni
ENSSBOG00000027263CPSF310090.580ENSHGLG00000000666CPSF39990.580Heterocephalus_glaber_female
ENSSBOG00000027263CPSF310090.580ENSHGLG00100007765CPSF39990.580Heterocephalus_glaber_male
ENSSBOG00000027263CPSF39782.985ENSHCOG00000015957CPSF39582.985Hippocampus_comes
ENSSBOG00000027263CPSF39781.381ENSHCOG00000007251cpsf39681.381Hippocampus_comes
ENSSBOG00000027263CPSF39783.582ENSIPUG00000023488cpsf39683.582Ictalurus_punctatus
ENSSBOG00000027263CPSF310092.609ENSSTOG00000004476CPSF310092.609Ictidomys_tridecemlineatus
ENSSBOG00000027263CPSF310091.594ENSJJAG00000023415Cpsf310091.594Jaculus_jaculus
ENSSBOG00000027263CPSF39781.504ENSKMAG00000002806cpsf39681.504Kryptolebias_marmoratus
ENSSBOG00000027263CPSF39784.030ENSKMAG00000007317CPSF39684.030Kryptolebias_marmoratus
ENSSBOG00000027263CPSF39775.635ENSLBEG00000020569cpsf39275.635Labrus_bergylta
ENSSBOG00000027263CPSF35473.740ENSLBEG00000015018-9973.740Labrus_bergylta
ENSSBOG00000027263CPSF39285.266ENSLBEG00000013492CPSF39685.266Labrus_bergylta
ENSSBOG00000027263CPSF39780.120ENSLACG00000008308CPSF39680.120Latimeria_chalumnae
ENSSBOG00000027263CPSF39785.097ENSLOCG00000016823cpsf39685.097Lepisosteus_oculatus
ENSSBOG00000027263CPSF39894.214ENSLAFG00000009467CPSF39994.214Loxodonta_africana
ENSSBOG00000027263CPSF310093.768ENSMFAG00000001339CPSF39995.385Macaca_fascicularis
ENSSBOG00000027263CPSF39495.392ENSMMUG00000018038CPSF310095.392Macaca_mulatta
ENSSBOG00000027263CPSF310081.159ENSMNEG00000039447CPSF310081.159Macaca_nemestrina
ENSSBOG00000027263CPSF310093.623ENSMLEG00000026825CPSF310093.623Mandrillus_leucophaeus
ENSSBOG00000027263CPSF39782.105ENSMAMG00000003076cpsf39682.105Mastacembelus_armatus
ENSSBOG00000027263CPSF39281.604ENSMAMG00000008835CPSF39981.604Mastacembelus_armatus
ENSSBOG00000027263CPSF39781.764ENSMZEG00005014358cpsf39979.114Maylandia_zebra
ENSSBOG00000027263CPSF39784.925ENSMZEG00005006258CPSF39982.650Maylandia_zebra
ENSSBOG00000027263CPSF39791.154ENSMGAG00000013995CPSF310091.154Meleagris_gallopavo
ENSSBOG00000027263CPSF35589.211ENSMAUG00000000166Cpsf310089.211Mesocricetus_auratus
ENSSBOG00000027263CPSF310087.681ENSMICG00000002363CPSF310088.665Microcebus_murinus
ENSSBOG00000027263CPSF310088.116ENSMOCG00000020067Cpsf310088.116Microtus_ochrogaster
ENSSBOG00000027263CPSF36677.857ENSMMOG00000011923CPSF37677.857Mola_mola
ENSSBOG00000027263CPSF39478.891ENSMMOG00000018212CPSF39878.891Mola_mola
ENSSBOG00000027263CPSF310089.813ENSMODG00000014703CPSF310089.813Monodelphis_domestica
ENSSBOG00000027263CPSF39279.969ENSMALG00000011474CPSF39979.969Monopterus_albus
ENSSBOG00000027263CPSF39782.362ENSMALG00000016416cpsf39979.430Monopterus_albus
ENSSBOG00000027263CPSF310092.319MGP_CAROLIEiJ_G0017640Cpsf310092.319Mus_caroli
ENSSBOG00000027263CPSF310092.319ENSMUSG00000054309Cpsf39798.750Mus_musculus
ENSSBOG00000027263CPSF310092.174MGP_PahariEiJ_G0029397Cpsf310092.174Mus_pahari
ENSSBOG00000027263CPSF310092.319MGP_SPRETEiJ_G0018481Cpsf310092.319Mus_spretus
ENSSBOG00000027263CPSF310092.464ENSMPUG00000013213CPSF310092.464Mustela_putorius_furo
ENSSBOG00000027263CPSF310092.185ENSMLUG00000010636CPSF310092.185Myotis_lucifugus
ENSSBOG00000027263CPSF310092.464ENSNGAG00000019836Cpsf310092.464Nannospalax_galili
ENSSBOG00000027263CPSF39781.465ENSNBRG00000004770cpsf39978.797Neolamprologus_brichardi
ENSSBOG00000027263CPSF39282.650ENSNBRG00000010525CPSF39982.650Neolamprologus_brichardi
ENSSBOG00000027263CPSF310093.768ENSNLEG00000013359CPSF310095.392Nomascus_leucogenys
ENSSBOG00000027263CPSF38373.333ENSMEUG00000013117-8373.333Notamacropus_eugenii
ENSSBOG00000027263CPSF39785.097ENSOPRG00000008902CPSF39885.097Ochotona_princeps
ENSSBOG00000027263CPSF310090.725ENSODEG00000003129CPSF310090.725Octodon_degus
ENSSBOG00000027263CPSF39781.913ENSONIG00000018812cpsf39681.913Oreochromis_niloticus
ENSSBOG00000027263CPSF38291.312ENSOANG00000008577CPSF310091.312Ornithorhynchus_anatinus
ENSSBOG00000027263CPSF310092.754ENSOCUG00000003728CPSF310092.754Oryctolagus_cuniculus
ENSSBOG00000027263CPSF39780.150ENSORLG00000018854cpsf39680.150Oryzias_latipes
ENSSBOG00000027263CPSF39780.150ENSORLG00020013331cpsf39680.150Oryzias_latipes_hni
ENSSBOG00000027263CPSF39780.150ENSORLG00015011017cpsf39680.150Oryzias_latipes_hsok
ENSSBOG00000027263CPSF39780.301ENSOMEG00000010647cpsf39280.301Oryzias_melastigma
ENSSBOG00000027263CPSF310083.478ENSOGAG00000001680CPSF310083.478Otolemur_garnettii
ENSSBOG00000027263CPSF310093.333ENSOARG00000015073CPSF310093.333Ovis_aries
ENSSBOG00000027263CPSF310093.623ENSPPAG00000042457CPSF310093.623Pan_paniscus
ENSSBOG00000027263CPSF310093.043ENSPPRG00000016790CPSF310094.624Panthera_pardus
ENSSBOG00000027263CPSF39794.784ENSPTIG00000003920CPSF310094.523Panthera_tigris_altaica
ENSSBOG00000027263CPSF310093.623ENSPTRG00000011638CPSF310093.623Pan_troglodytes
ENSSBOG00000027263CPSF310093.623ENSPANG00000016798CPSF310093.623Papio_anubis
ENSSBOG00000027263CPSF39786.099ENSPKIG00000023646cpsf39985.670Paramormyrops_kingsleyae
ENSSBOG00000027263CPSF39790.164ENSPSIG00000016144CPSF39890.164Pelodiscus_sinensis
ENSSBOG00000027263CPSF35974.572ENSPMGG00000015311CPSF39974.572Periophthalmus_magnuspinnatus
ENSSBOG00000027263CPSF38281.152ENSPMGG00000006141-9981.152Periophthalmus_magnuspinnatus
ENSSBOG00000027263CPSF310092.029ENSPEMG00000017668Cpsf310092.029Peromyscus_maniculatus_bairdii
ENSSBOG00000027263CPSF37586.180ENSPMAG00000004841cpsf39686.180Petromyzon_marinus
ENSSBOG00000027263CPSF39792.996ENSPCIG00000009823CPSF39892.996Phascolarctos_cinereus
ENSSBOG00000027263CPSF39784.006ENSPFOG00000010418-9684.006Poecilia_formosa
ENSSBOG00000027263CPSF39781.231ENSPFOG00000015922cpsf39681.231Poecilia_formosa
ENSSBOG00000027263CPSF39781.231ENSPLAG00000000882cpsf39681.231Poecilia_latipinna
ENSSBOG00000027263CPSF35975.000ENSPLAG00000021300-9975.000Poecilia_latipinna
ENSSBOG00000027263CPSF39781.231ENSPMEG00000018309cpsf39681.231Poecilia_mexicana
ENSSBOG00000027263CPSF39178.696ENSPREG00000014875cpsf39978.696Poecilia_reticulata
ENSSBOG00000027263CPSF39778.625ENSPREG00000004482CPSF39678.625Poecilia_reticulata
ENSSBOG00000027263CPSF310089.420ENSPPYG00000012666CPSF310089.420Pongo_abelii
ENSSBOG00000027263CPSF38964.927ENSPCAG00000015042CPSF39464.927Procavia_capensis
ENSSBOG00000027263CPSF38887.676ENSPCOG00000023016CPSF39887.676Propithecus_coquereli
ENSSBOG00000027263CPSF39993.169ENSPVAG00000005324CPSF39993.169Pteropus_vampyrus
ENSSBOG00000027263CPSF39781.764ENSPNYG00000004405cpsf39979.114Pundamilia_nyererei
ENSSBOG00000027263CPSF37987.386ENSPNYG00000021047CPSF39187.386Pundamilia_nyererei
ENSSBOG00000027263CPSF39783.881ENSPNAG00000023060cpsf39981.517Pygocentrus_nattereri
ENSSBOG00000027263CPSF39992.297ENSRNOG00000052418Cpsf39992.297Rattus_norvegicus
ENSSBOG00000027263CPSF310092.555ENSRBIG00000041615CPSF39995.820Rhinopithecus_bieti
ENSSBOG00000027263CPSF310093.623ENSRROG00000033792CPSF310093.623Rhinopithecus_roxellana
ENSSBOG00000027263CPSF39439.840YLR277CYSH19639.840Saccharomyces_cerevisiae
ENSSBOG00000027263CPSF310091.449ENSSHAG00000007024CPSF310091.449Sarcophilus_harrisii
ENSSBOG00000027263CPSF39786.398ENSSFOG00015002108cpsf39985.714Scleropages_formosus
ENSSBOG00000027263CPSF39283.856ENSSMAG00000020534CPSF39383.856Scophthalmus_maximus
ENSSBOG00000027263CPSF39782.406ENSSDUG00000002828cpsf39482.406Seriola_dumerili
ENSSBOG00000027263CPSF39784.328ENSSDUG00000018498CPSF39982.334Seriola_dumerili
ENSSBOG00000027263CPSF39784.328ENSSLDG00000005234CPSF39982.334Seriola_lalandi_dorsalis
ENSSBOG00000027263CPSF39782.556ENSSLDG00000008469cpsf38987.631Seriola_lalandi_dorsalis
ENSSBOG00000027263CPSF310075.217ENSSARG00000005186CPSF310075.217Sorex_araneus
ENSSBOG00000027263CPSF39788.000ENSSPUG00000015525CPSF39788.000Sphenodon_punctatus
ENSSBOG00000027263CPSF39781.764ENSSPAG00000018579cpsf39681.764Stegastes_partitus
ENSSBOG00000027263CPSF39784.179ENSSPAG00000002906CPSF39982.019Stegastes_partitus
ENSSBOG00000027263CPSF39993.033ENSSSCG00000020799CPSF39993.175Sus_scrofa
ENSSBOG00000027263CPSF39791.304ENSTGUG00000013016CPSF39891.304Taeniopygia_guttata
ENSSBOG00000027263CPSF35968.049ENSTRUG00000013905CPSF39968.049Takifugu_rubripes
ENSSBOG00000027263CPSF39781.465ENSTRUG00000007030cpsf39581.465Takifugu_rubripes
ENSSBOG00000027263CPSF38290.191ENSTBEG00000002707CPSF38190.191Tupaia_belangeri
ENSSBOG00000027263CPSF38798.352ENSTTRG00000000861CPSF38798.352Tursiops_truncatus
ENSSBOG00000027263CPSF39990.116ENSUAMG00000007535CPSF39890.116Ursus_americanus
ENSSBOG00000027263CPSF39494.777ENSUMAG00000003676CPSF310094.777Ursus_maritimus
ENSSBOG00000027263CPSF39291.066ENSVPAG00000008041CPSF310091.066Vicugna_pacos
ENSSBOG00000027263CPSF310093.188ENSVVUG00000002194CPSF310093.188Vulpes_vulpes
ENSSBOG00000027263CPSF39786.015ENSXETG00000008263cpsf39686.015Xenopus_tropicalis
ENSSBOG00000027263CPSF39781.532ENSXCOG00000019695cpsf39681.532Xiphophorus_couchianus
ENSSBOG00000027263CPSF35473.067ENSXCOG00000000957-8772.800Xiphophorus_couchianus
ENSSBOG00000027263CPSF39784.305ENSXMAG00000027291CPSF39684.305Xiphophorus_maculatus
ENSSBOG00000027263CPSF39781.231ENSXMAG00000009784cpsf39980.650Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us