EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000027456 (Gene tree)
Gene ID: 101029695
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 117456 bases
Position: chrJH378160.1:14044799-14162254
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000021823	ResIII	PF04851.15	1.7e-11	1	1
ENSSBOP00000021823	DEAD	PF00270.29	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000038666	HFM1-201	4230	XM_010343866	ENSSBOP00000021823	1409 (aa)	XP_010342168	A0A2K6TQ72

Gene Model

Click here to download ENSSBOG00000027456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000027456	HFM1	59	31.907	ENSSBOG00000035471	SNRNP200	75	31.907
ENSSBOG00000027456	HFM1	52	35.224	ENSSBOG00000025142	ASCC3	62	35.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027456	HFM1	100	91.220	ENSG00000162669	HFM1	100	91.304	Homo_sapiens
ENSSBOG00000027456	HFM1	63	65.311	ENSAPOG00000005304	hfm1	100	65.311	Acanthochromis_polyacanthus
ENSSBOG00000027456	HFM1	100	82.766	ENSAMEG00000000432	HFM1	100	82.766	Ailuropoda_melanoleuca
ENSSBOG00000027456	HFM1	66	63.365	ENSACIG00000021553	hfm1	83	63.365	Amphilophus_citrinellus
ENSSBOG00000027456	HFM1	59	66.307	ENSAOCG00000022839	hfm1	100	66.307	Amphiprion_ocellaris
ENSSBOG00000027456	HFM1	59	66.067	ENSAPEG00000014316	hfm1	100	66.067	Amphiprion_percula
ENSSBOG00000027456	HFM1	68	64.190	ENSATEG00000019181	hfm1	80	63.319	Anabas_testudineus
ENSSBOG00000027456	HFM1	100	58.836	ENSAPLG00000013639	HFM1	100	58.836	Anas_platyrhynchos
ENSSBOG00000027456	HFM1	100	92.179	ENSANAG00000029513	HFM1	100	92.179	Aotus_nancymaae
ENSSBOG00000027456	HFM1	66	63.412	ENSACLG00000009033	hfm1	97	64.875	Astatotilapia_calliptera
ENSSBOG00000027456	HFM1	87	54.394	ENSAMXG00000006108	hfm1	83	54.394	Astyanax_mexicanus
ENSSBOG00000027456	HFM1	100	82.292	ENSBTAG00000020856	HFM1	100	82.292	Bos_taurus
ENSSBOG00000027456	HFM1	100	93.929	ENSCJAG00000001843	HFM1	100	93.929	Callithrix_jacchus
ENSSBOG00000027456	HFM1	100	82.349	ENSCAFG00000020187	HFM1	100	82.349	Canis_familiaris
ENSSBOG00000027456	HFM1	100	82.488	ENSTSYG00000014250	HFM1	100	82.488	Carlito_syrichta
ENSSBOG00000027456	HFM1	99	75.860	ENSCPOG00000007421	HFM1	99	75.860	Cavia_porcellus
ENSSBOG00000027456	HFM1	100	94.068	ENSCCAG00000033206	HFM1	100	94.068	Cebus_capucinus
ENSSBOG00000027456	HFM1	100	90.801	ENSCATG00000030987	HFM1	100	90.801	Cercocebus_atys
ENSSBOG00000027456	HFM1	99	83.002	ENSCLAG00000005173	HFM1	94	83.002	Chinchilla_lanigera
ENSSBOG00000027456	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSSBOG00000027456	HFM1	100	70.914	ENSCGRG00001016995	Hfm1	100	70.914	Cricetulus_griseus_chok1gshd
ENSSBOG00000027456	HFM1	100	74.705	ENSCGRG00000017181	Hfm1	100	74.705	Cricetulus_griseus_crigri
ENSSBOG00000027456	HFM1	66	62.565	ENSCSEG00000017659	hfm1	87	62.878	Cynoglossus_semilaevis
ENSSBOG00000027456	HFM1	51	68.303	ENSCVAG00000005075	hfm1	86	68.303	Cyprinodon_variegatus
ENSSBOG00000027456	HFM1	80	54.426	ENSDARG00000104288	hfm1	99	54.426	Danio_rerio
ENSSBOG00000027456	HFM1	100	75.135	ENSDNOG00000004776	HFM1	100	75.135	Dasypus_novemcinctus
ENSSBOG00000027456	HFM1	100	75.481	ENSDORG00000014661	Hfm1	100	75.481	Dipodomys_ordii
ENSSBOG00000027456	HFM1	67	87.381	ENSEASG00005015424	HFM1	98	81.957	Equus_asinus_asinus
ENSSBOG00000027456	HFM1	99	86.994	ENSECAG00000024039	HFM1	94	86.994	Equus_caballus
ENSSBOG00000027456	HFM1	64	66.959	ENSELUG00000018944	hfm1	97	66.959	Esox_lucius
ENSSBOG00000027456	HFM1	100	82.500	ENSFCAG00000029116	HFM1	100	82.500	Felis_catus
ENSSBOG00000027456	HFM1	100	59.262	ENSFALG00000001781	HFM1	100	59.876	Ficedula_albicollis
ENSSBOG00000027456	HFM1	99	82.084	ENSFDAG00000020816	HFM1	95	82.084	Fukomys_damarensis
ENSSBOG00000027456	HFM1	67	60.250	ENSGMOG00000017436	hfm1	100	60.250	Gadus_morhua
ENSSBOG00000027456	HFM1	66	65.129	ENSGAFG00000018093	hfm1	92	66.707	Gambusia_affinis
ENSSBOG00000027456	HFM1	68	61.618	ENSGACG00000015686	hfm1	100	61.618	Gasterosteus_aculeatus
ENSSBOG00000027456	HFM1	100	90.871	ENSGGOG00000038524	HFM1	100	90.871	Gorilla_gorilla
ENSSBOG00000027456	HFM1	66	64.485	ENSHBUG00000007309	hfm1	86	64.485	Haplochromis_burtoni
ENSSBOG00000027456	HFM1	58	63.480	ENSHCOG00000019632	hfm1	97	63.480	Hippocampus_comes
ENSSBOG00000027456	HFM1	67	64.557	ENSIPUG00000017020	hfm1	92	65.714	Ictalurus_punctatus
ENSSBOG00000027456	HFM1	100	78.107	ENSJJAG00000017198	Hfm1	100	78.107	Jaculus_jaculus
ENSSBOG00000027456	HFM1	63	63.082	ENSKMAG00000002282	hfm1	91	63.082	Kryptolebias_marmoratus
ENSSBOG00000027456	HFM1	66	63.383	ENSLBEG00000006759	hfm1	98	64.865	Labrus_bergylta
ENSSBOG00000027456	HFM1	68	70.764	ENSLACG00000010698	HFM1	91	70.764	Latimeria_chalumnae
ENSSBOG00000027456	HFM1	72	64.981	ENSLOCG00000004931	hfm1	94	65.078	Lepisosteus_oculatus
ENSSBOG00000027456	HFM1	53	88.964	ENSLAFG00000015903	-	99	88.964	Loxodonta_africana
ENSSBOG00000027456	HFM1	100	87.370	ENSMFAG00000003649	HFM1	100	87.370	Macaca_fascicularis
ENSSBOG00000027456	HFM1	100	90.314	ENSMMUG00000006819	HFM1	100	90.314	Macaca_mulatta
ENSSBOG00000027456	HFM1	59	66.304	ENSMAMG00000004623	hfm1	97	66.304	Mastacembelus_armatus
ENSSBOG00000027456	HFM1	66	63.412	ENSMZEG00005004679	hfm1	97	64.875	Maylandia_zebra
ENSSBOG00000027456	HFM1	56	76.913	ENSMGAG00000008437	HFM1	98	76.913	Meleagris_gallopavo
ENSSBOG00000027456	HFM1	100	75.139	ENSMAUG00000018858	Hfm1	100	75.139	Mesocricetus_auratus
ENSSBOG00000027456	HFM1	100	83.878	ENSMICG00000037935	HFM1	100	83.878	Microcebus_murinus
ENSSBOG00000027456	HFM1	100	73.227	ENSMOCG00000014812	Hfm1	100	73.227	Microtus_ochrogaster
ENSSBOG00000027456	HFM1	63	63.453	ENSMMOG00000006148	hfm1	96	63.995	Mola_mola
ENSSBOG00000027456	HFM1	66	63.927	ENSMALG00000002401	hfm1	96	65.304	Monopterus_albus
ENSSBOG00000027456	HFM1	94	77.875	MGP_CAROLIEiJ_G0027496	Hfm1	95	77.875	Mus_caroli
ENSSBOG00000027456	HFM1	100	73.992	ENSMUSG00000043410	Hfm1	100	73.992	Mus_musculus
ENSSBOG00000027456	HFM1	100	73.783	MGP_PahariEiJ_G0017268	Hfm1	100	73.783	Mus_pahari
ENSSBOG00000027456	HFM1	100	73.853	MGP_SPRETEiJ_G0028495	Hfm1	100	73.853	Mus_spretus
ENSSBOG00000027456	HFM1	99	85.170	ENSMPUG00000004594	HFM1	94	85.170	Mustela_putorius_furo
ENSSBOG00000027456	HFM1	100	80.556	ENSMLUG00000010200	HFM1	100	80.556	Myotis_lucifugus
ENSSBOG00000027456	HFM1	69	58.836	ENSNBRG00000002910	hfm1	97	65.333	Neolamprologus_brichardi
ENSSBOG00000027456	HFM1	100	86.708	ENSNLEG00000010285	HFM1	100	86.708	Nomascus_leucogenys
ENSSBOG00000027456	HFM1	84	66.567	ENSMEUG00000015788	HFM1	83	66.567	Notamacropus_eugenii
ENSSBOG00000027456	HFM1	84	77.226	ENSOPRG00000013916	HFM1	84	77.226	Ochotona_princeps
ENSSBOG00000027456	HFM1	70	62.826	ENSONIG00000010590	hfm1	95	62.826	Oreochromis_niloticus
ENSSBOG00000027456	HFM1	58	65.683	ENSORLG00000026844	hfm1	99	65.683	Oryzias_latipes
ENSSBOG00000027456	HFM1	69	57.259	ENSORLG00020002951	hfm1	96	49.718	Oryzias_latipes_hni
ENSSBOG00000027456	HFM1	69	63.131	ENSOMEG00000016474	hfm1	68	63.131	Oryzias_melastigma
ENSSBOG00000027456	HFM1	87	86.726	ENSOGAG00000032369	HFM1	100	86.726	Otolemur_garnettii
ENSSBOG00000027456	HFM1	100	82.823	ENSOARG00000015812	HFM1	100	82.823	Ovis_aries
ENSSBOG00000027456	HFM1	92	91.692	ENSPPAG00000024582	HFM1	100	91.692	Pan_paniscus
ENSSBOG00000027456	HFM1	100	82.431	ENSPPRG00000003270	HFM1	100	82.431	Panthera_pardus
ENSSBOG00000027456	HFM1	100	82.292	ENSPTIG00000018881	HFM1	100	82.292	Panthera_tigris_altaica
ENSSBOG00000027456	HFM1	100	91.080	ENSPTRG00000000948	HFM1	100	91.080	Pan_troglodytes
ENSSBOG00000027456	HFM1	100	90.592	ENSPANG00000009838	HFM1	100	90.592	Papio_anubis
ENSSBOG00000027456	HFM1	63	67.079	ENSPKIG00000003810	hfm1	95	67.636	Paramormyrops_kingsleyae
ENSSBOG00000027456	HFM1	59	65.659	ENSPMGG00000011059	hfm1	100	65.659	Periophthalmus_magnuspinnatus
ENSSBOG00000027456	HFM1	100	76.356	ENSPEMG00000022852	Hfm1	100	76.356	Peromyscus_maniculatus_bairdii
ENSSBOG00000027456	HFM1	98	72.222	ENSPCIG00000014233	HFM1	94	72.222	Phascolarctos_cinereus
ENSSBOG00000027456	HFM1	68	65.564	ENSPFOG00000017194	hfm1	92	65.564	Poecilia_formosa
ENSSBOG00000027456	HFM1	66	66.560	ENSPLAG00000000571	hfm1	85	66.560	Poecilia_latipinna
ENSSBOG00000027456	HFM1	66	66.208	ENSPMEG00000019475	hfm1	86	66.208	Poecilia_mexicana
ENSSBOG00000027456	HFM1	66	65.951	ENSPREG00000007803	hfm1	92	66.423	Poecilia_reticulata
ENSSBOG00000027456	HFM1	100	90.801	ENSPPYG00000001163	HFM1	100	90.801	Pongo_abelii
ENSSBOG00000027456	HFM1	74	81.081	ENSPCAG00000004289	-	74	81.081	Procavia_capensis
ENSSBOG00000027456	HFM1	100	77.260	ENSPVAG00000009713	HFM1	100	77.260	Pteropus_vampyrus
ENSSBOG00000027456	HFM1	66	63.197	ENSPNYG00000001795	hfm1	97	64.755	Pundamilia_nyererei
ENSSBOG00000027456	HFM1	60	67.494	ENSPNAG00000010865	hfm1	84	67.494	Pygocentrus_nattereri
ENSSBOG00000027456	HFM1	100	73.296	ENSRNOG00000023299	Hfm1	100	73.296	Rattus_norvegicus
ENSSBOG00000027456	HFM1	100	90.523	ENSRROG00000045569	HFM1	100	90.523	Rhinopithecus_roxellana
ENSSBOG00000027456	HFM1	61	71.214	ENSSHAG00000014616	-	98	71.214	Sarcophilus_harrisii
ENSSBOG00000027456	HFM1	87	56.260	ENSSFOG00015020129	hfm1	83	56.260	Scleropages_formosus
ENSSBOG00000027456	HFM1	63	64.358	ENSSMAG00000006907	hfm1	87	64.358	Scophthalmus_maximus
ENSSBOG00000027456	HFM1	61	64.094	ENSSDUG00000011424	hfm1	96	64.094	Seriola_dumerili
ENSSBOG00000027456	HFM1	64	65.663	ENSSLDG00000016386	hfm1	100	65.663	Seriola_lalandi_dorsalis
ENSSBOG00000027456	HFM1	67	60.063	ENSSPAG00000001023	hfm1	95	65.599	Stegastes_partitus
ENSSBOG00000027456	HFM1	100	78.055	ENSSSCG00000006912	HFM1	100	78.055	Sus_scrofa
ENSSBOG00000027456	HFM1	68	74.817	ENSTGUG00000006172	HFM1	100	74.817	Taeniopygia_guttata
ENSSBOG00000027456	HFM1	100	77.939	ENSTTRG00000013933	HFM1	100	77.939	Tursiops_truncatus
ENSSBOG00000027456	HFM1	93	80.471	ENSVPAG00000011331	HFM1	93	80.471	Vicugna_pacos
ENSSBOG00000027456	HFM1	67	85.896	ENSVVUG00000020760	HFM1	91	85.896	Vulpes_vulpes
ENSSBOG00000027456	HFM1	59	66.228	ENSXMAG00000004178	hfm1	93	66.228	Xiphophorus_maculatus