EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000027549 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 2155 bases
Position: chrJH378163.1:8819611-8821765
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000022068	RRM_1	PF00076.22	7.2e-47	1	4
ENSSBOP00000022068	RRM_1	PF00076.22	7.2e-47	2	4
ENSSBOP00000022068	RRM_1	PF00076.22	7.2e-47	3	4
ENSSBOP00000022068	RRM_1	PF00076.22	7.2e-47	4	4
ENSSBOP00000022050	RRM_1	PF00076.22	2.6e-46	1	4
ENSSBOP00000022050	RRM_1	PF00076.22	2.6e-46	2	4
ENSSBOP00000022050	RRM_1	PF00076.22	2.6e-46	3	4
ENSSBOP00000022050	RRM_1	PF00076.22	2.6e-46	4	4
ENSSBOP00000022020	RRM_1	PF00076.22	2.7e-46	1	4
ENSSBOP00000022020	RRM_1	PF00076.22	2.7e-46	2	4
ENSSBOP00000022020	RRM_1	PF00076.22	2.7e-46	3	4
ENSSBOP00000022020	RRM_1	PF00076.22	2.7e-46	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000038896	-	1998	-	ENSSBOP00000022050	665 (aa)	-	A0A2K6TQY0
ENSSBOT00000038866	-	2013	XM_010344241	ENSSBOP00000022020	670 (aa)	XP_010342543	A0A2K6TQV0
ENSSBOT00000038914	-	1614	-	ENSSBOP00000022068	537 (aa)	-	A0A2K6TQX8

Gene Model

Click here to download ENSSBOG00000027549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000027549	-	56	30.597	ENSSBOG00000016382	PABPC4L	92	30.597
ENSSBOG00000027549	-	98	91.116	ENSSBOG00000029193	-	71	89.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027549	-	94	90.888	ENSG00000115053	NCL	100	84.972	Homo_sapiens
ENSSBOG00000027549	-	94	89.294	ENSAMEG00000016289	NCL	81	89.294	Ailuropoda_melanoleuca
ENSSBOG00000027549	-	97	91.344	ENSANAG00000035814	-	100	85.211	Aotus_nancymaae
ENSSBOG00000027549	-	98	73.356	ENSANAG00000024378	-	98	78.030	Aotus_nancymaae
ENSSBOG00000027549	-	89	83.333	ENSBTAG00000051320	-	73	81.690	Bos_taurus
ENSSBOG00000027549	-	94	89.294	ENSBTAG00000016174	NCL	70	85.827	Bos_taurus
ENSSBOG00000027549	-	91	83.750	ENSBTAG00000026909	-	63	86.622	Bos_taurus
ENSSBOG00000027549	-	91	82.787	ENSBTAG00000050728	-	89	82.787	Bos_taurus
ENSSBOG00000027549	-	94	91.344	ENSCJAG00000013538	NCL	100	83.708	Callithrix_jacchus
ENSSBOG00000027549	-	96	89.294	ENSCAFG00000011037	NCL	70	86.957	Canis_familiaris
ENSSBOG00000027549	-	77	89.749	ENSCAFG00020023145	NCL	65	89.749	Canis_lupus_dingo
ENSSBOG00000027549	-	91	72.727	ENSCHIG00000026149	-	93	72.111	Capra_hircus
ENSSBOG00000027549	-	84	77.657	ENSCHIG00000012143	-	92	65.055	Capra_hircus
ENSSBOG00000027549	-	100	76.640	ENSCHIG00000021052	-	90	89.860	Capra_hircus
ENSSBOG00000027549	-	77	89.294	ENSCHIG00000010894	-	76	85.236	Capra_hircus
ENSSBOG00000027549	-	88	86.577	ENSTSYG00000029779	-	96	76.348	Carlito_syrichta
ENSSBOG00000027549	-	91	80.793	ENSTSYG00000004355	-	73	88.391	Carlito_syrichta
ENSSBOG00000027549	-	89	71.498	ENSTSYG00000036886	-	84	78.873	Carlito_syrichta
ENSSBOG00000027549	-	97	83.371	ENSCAPG00000009405	NCL	70	80.838	Cavia_aperea
ENSSBOG00000027549	-	98	87.472	ENSCPOG00000001034	NCL	70	84.431	Cavia_porcellus
ENSSBOG00000027549	-	87	81.463	ENSCCAG00000000551	-	77	81.463	Cebus_capucinus
ENSSBOG00000027549	-	97	88.838	ENSCCAG00000021040	-	100	84.746	Cebus_capucinus
ENSSBOG00000027549	-	95	90.888	ENSCATG00000037033	NCL	70	88.845	Cercocebus_atys
ENSSBOG00000027549	-	97	87.699	ENSCLAG00000013080	NCL	70	84.752	Chinchilla_lanigera
ENSSBOG00000027549	-	77	90.682	ENSCSAG00000006660	NCL	95	90.661	Chlorocebus_sabaeus
ENSSBOG00000027549	-	65	75.342	ENSCHOG00000012860	NCL	89	71.132	Choloepus_hoffmanni
ENSSBOG00000027549	-	74	95.455	ENSCANG00000036756	NCL	93	95.455	Colobus_angolensis_palliatus
ENSSBOG00000027549	-	84	71.354	ENSCGRG00001022350	-	68	75.325	Cricetulus_griseus_chok1gshd
ENSSBOG00000027549	-	91	74.809	ENSCGRG00001024315	-	61	78.182	Cricetulus_griseus_chok1gshd
ENSSBOG00000027549	-	82	75.309	ENSCGRG00000000507	-	68	75.325	Cricetulus_griseus_crigri
ENSSBOG00000027549	-	84	74.267	ENSCGRG00000017894	-	63	78.829	Cricetulus_griseus_crigri
ENSSBOG00000027549	-	98	73.636	ENSDNOG00000046347	-	72	72.955	Dasypus_novemcinctus
ENSSBOG00000027549	-	98	84.773	ENSDNOG00000010783	-	100	76.297	Dasypus_novemcinctus
ENSSBOG00000027549	-	91	72.050	ENSDORG00000012513	-	91	72.601	Dipodomys_ordii
ENSSBOG00000027549	-	90	67.397	ENSDORG00000023596	-	94	66.407	Dipodomys_ordii
ENSSBOG00000027549	-	66	81.698	ENSETEG00000014756	-	86	81.794	Echinops_telfairi
ENSSBOG00000027549	-	66	82.105	ENSETEG00000018937	-	85	69.522	Echinops_telfairi
ENSSBOG00000027549	-	87	52.878	ENSETEG00000008139	-	64	61.475	Echinops_telfairi
ENSSBOG00000027549	-	77	56.236	ENSETEG00000008553	-	88	56.335	Echinops_telfairi
ENSSBOG00000027549	-	91	88.838	ENSEASG00005008488	NCL	86	91.429	Equus_asinus_asinus
ENSSBOG00000027549	-	94	88.838	ENSECAG00000021868	NCL	81	88.838	Equus_caballus
ENSSBOG00000027549	-	84	73.841	ENSEEUG00000005913	NCL	62	79.545	Erinaceus_europaeus
ENSSBOG00000027549	-	94	89.522	ENSFCAG00000027622	NCL	92	79.331	Felis_catus
ENSSBOG00000027549	-	96	87.699	ENSFDAG00000014291	NCL	100	78.451	Fukomys_damarensis
ENSSBOG00000027549	-	98	90.888	ENSGGOG00000004300	NCL	100	87.296	Gorilla_gorilla
ENSSBOG00000027549	-	99	88.155	ENSHGLG00000002031	-	70	86.056	Heterocephalus_glaber_female
ENSSBOG00000027549	-	53	77.273	ENSHGLG00000005133	-	100	69.580	Heterocephalus_glaber_female
ENSSBOG00000027549	-	91	71.451	ENSHGLG00000011069	-	92	70.938	Heterocephalus_glaber_female
ENSSBOG00000027549	-	99	87.927	ENSHGLG00100014537	-	70	85.429	Heterocephalus_glaber_male
ENSSBOG00000027549	-	91	65.819	ENSHGLG00100000745	-	59	76.658	Heterocephalus_glaber_male
ENSSBOG00000027549	-	91	82.667	ENSJJAG00000016165	Ncl	93	72.419	Jaculus_jaculus
ENSSBOG00000027549	-	91	69.195	ENSLAFG00000013061	NCL	67	77.690	Loxodonta_africana
ENSSBOG00000027549	-	98	90.888	ENSMFAG00000040385	NCL	85	83.307	Macaca_fascicularis
ENSSBOG00000027549	-	98	90.888	ENSMMUG00000018094	NCL	86	92.857	Macaca_mulatta
ENSSBOG00000027549	-	94	90.888	ENSMNEG00000023839	NCL	100	84.736	Macaca_nemestrina
ENSSBOG00000027549	-	95	90.888	ENSMLEG00000028935	NCL	70	88.845	Mandrillus_leucophaeus
ENSSBOG00000027549	-	91	70.813	ENSMICG00000029975	-	86	81.481	Microcebus_murinus
ENSSBOG00000027549	-	96	90.205	ENSMICG00000002538	-	62	90.205	Microcebus_murinus
ENSSBOG00000027549	-	91	70.732	MGP_CAROLIEiJ_G0014362	Ncl	61	75.854	Mus_caroli
ENSSBOG00000027549	-	91	70.884	ENSMUSG00000026234	Ncl	61	76.310	Mus_musculus
ENSSBOG00000027549	-	91	71.081	MGP_PahariEiJ_G0027599	Ncl	61	76.310	Mus_pahari
ENSSBOG00000027549	-	91	70.776	MGP_SPRETEiJ_G0015164	Ncl	61	75.626	Mus_spretus
ENSSBOG00000027549	-	94	89.066	ENSMLUG00000014547	NCL	74	89.066	Myotis_lucifugus
ENSSBOG00000027549	-	85	81.530	ENSNGAG00000002454	-	61	78.636	Nannospalax_galili
ENSSBOG00000027549	-	84	65.583	ENSNGAG00000006188	-	54	65.583	Nannospalax_galili
ENSSBOG00000027549	-	84	70.872	ENSNLEG00000014107	-	88	74.535	Nomascus_leucogenys
ENSSBOG00000027549	-	97	82.688	ENSODEG00000003281	-	70	80.439	Octodon_degus
ENSSBOG00000027549	-	99	61.420	ENSODEG00000007803	-	67	61.420	Octodon_degus
ENSSBOG00000027549	-	91	69.375	ENSODEG00000002748	-	91	69.764	Octodon_degus
ENSSBOG00000027549	-	94	71.298	ENSODEG00000002441	-	95	66.614	Octodon_degus
ENSSBOG00000027549	-	100	70.909	ENSOCUG00000004312	NCL	79	87.472	Oryctolagus_cuniculus
ENSSBOG00000027549	-	83	82.353	ENSOGAG00000027852	NCL	75	82.620	Otolemur_garnettii
ENSSBOG00000027549	-	62	59.491	ENSOARG00000013270	-	100	56.552	Ovis_aries
ENSSBOG00000027549	-	82	86.649	ENSOARG00000020709	-	68	86.649	Ovis_aries
ENSSBOG00000027549	-	79	71.503	ENSOARG00000004072	-	92	65.128	Ovis_aries
ENSSBOG00000027549	-	72	85.411	ENSOARG00000013710	-	94	70.598	Ovis_aries
ENSSBOG00000027549	-	98	90.888	ENSPPAG00000011619	NCL	100	87.296	Pan_paniscus
ENSSBOG00000027549	-	94	89.294	ENSPPRG00000012603	NCL	81	89.294	Panthera_pardus
ENSSBOG00000027549	-	93	89.294	ENSPTIG00000010393	NCL	70	86.535	Panthera_tigris_altaica
ENSSBOG00000027549	-	94	90.888	ENSPTRG00000013025	NCL	100	87.622	Pan_troglodytes
ENSSBOG00000027549	-	98	90.888	ENSPANG00000010292	NCL	70	88.867	Papio_anubis
ENSSBOG00000027549	-	94	83.900	ENSPPYG00000013265	NCL	92	73.323	Pongo_abelii
ENSSBOG00000027549	-	87	88.391	ENSPCOG00000003051	-	62	86.395	Propithecus_coquereli
ENSSBOG00000027549	-	87	81.698	ENSPCOG00000004160	-	94	77.691	Propithecus_coquereli
ENSSBOG00000027549	-	100	82.937	ENSPVAG00000000297	NCL	74	89.522	Pteropus_vampyrus
ENSSBOG00000027549	-	83	80.211	ENSRNOG00000018273	Ncl	61	76.993	Rattus_norvegicus
ENSSBOG00000027549	-	91	80.930	ENSRBIG00000037525	-	91	80.187	Rhinopithecus_bieti
ENSSBOG00000027549	-	60	91.696	ENSRBIG00000035396	-	66	89.933	Rhinopithecus_bieti
ENSSBOG00000027549	-	93	80.875	ENSRROG00000036103	-	99	79.383	Rhinopithecus_roxellana
ENSSBOG00000027549	-	87	89.446	ENSRROG00000028756	-	91	83.564	Rhinopithecus_roxellana
ENSSBOG00000027549	-	83	87.071	ENSSSCG00000016275	NCL	72	87.071	Sus_scrofa
ENSSBOG00000027549	-	77	76.253	ENSTBEG00000001546	-	62	75.339	Tupaia_belangeri
ENSSBOG00000027549	-	87	71.622	ENSTBEG00000002469	-	66	75.000	Tupaia_belangeri
ENSSBOG00000027549	-	87	86.508	ENSTTRG00000009094	NCL	62	82.619	Tursiops_truncatus
ENSSBOG00000027549	-	77	89.294	ENSUAMG00000005639	NCL	100	85.317	Ursus_americanus
ENSSBOG00000027549	-	94	89.294	ENSUMAG00000015789	NCL	81	89.294	Ursus_maritimus
ENSSBOG00000027549	-	77	76.877	ENSVPAG00000001796	NCL	68	79.577	Vicugna_pacos
ENSSBOG00000027549	-	100	79.775	ENSVVUG00000025564	NCL	64	89.294	Vulpes_vulpes