EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000027568 (Gene tree)
Gene ID: 101045213
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 6166 bases
Position: chrJH378114.1:7107190-7113355
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000022005	Ribosomal_S18	PF01084.20	1.3e-21	1	1
ENSSBOP00000022010	Ribosomal_S18	PF01084.20	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000038851	-	619	XM_003923972	ENSSBOP00000022005	144 (aa)	XP_003924021	A0A2K6TQT3
ENSSBOT00000038861	-	213	-	ENSSBOP00000022015	71 (aa)	-	A0A2K6TQU5
ENSSBOT00000038856	-	351	-	ENSSBOP00000022010	116 (aa)	-	A0A2K6TQT8

Gene Model

Click here to download ENSSBOG00000027568's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000027568	-	95	75.912	ENSSBOG00000032292	-	98	75.912
ENSSBOG00000027568	-	99	81.818	ENSSBOG00000022205	-	92	81.818
ENSSBOG00000027568	-	100	69.444	ENSSBOG00000029234	-	100	69.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027568	-	100	92.361	ENSG00000163319	MRPS18C	100	92.361	Homo_sapiens
ENSSBOG00000027568	-	100	75.000	ENSAMEG00000004915	MRPS18C	100	75.000	Ailuropoda_melanoleuca
ENSSBOG00000027568	-	99	77.311	ENSANAG00000025323	-	94	77.311	Aotus_nancymaae
ENSSBOG00000027568	-	100	84.028	ENSANAG00000028055	-	100	84.028	Aotus_nancymaae
ENSSBOG00000027568	-	100	81.250	ENSBTAG00000018155	MRPS18C	100	81.250	Bos_taurus
ENSSBOG00000027568	-	100	70.690	ENSBTAG00000049836	-	100	70.690	Bos_taurus
ENSSBOG00000027568	-	100	95.139	ENSCJAG00000042247	MRPS18C	100	93.966	Callithrix_jacchus
ENSSBOG00000027568	-	100	81.250	ENSCAFG00020010491	MRPS18C	100	81.250	Canis_lupus_dingo
ENSSBOG00000027568	-	91	84.733	ENSCHIG00000004461	-	91	84.733	Capra_hircus
ENSSBOG00000027568	-	100	66.379	ENSCHIG00000016551	-	100	66.379	Capra_hircus
ENSSBOG00000027568	-	100	70.833	ENSCHIG00000022740	-	100	70.833	Capra_hircus
ENSSBOG00000027568	-	75	74.074	ENSCHIG00000019359	-	98	74.074	Capra_hircus
ENSSBOG00000027568	-	99	66.667	ENSCHIG00000018805	-	99	66.667	Capra_hircus
ENSSBOG00000027568	-	100	82.639	ENSTSYG00000012924	MRPS18C	100	82.639	Carlito_syrichta
ENSSBOG00000027568	-	100	83.333	ENSCPOG00000009198	MRPS18C	100	83.333	Cavia_porcellus
ENSSBOG00000027568	-	99	81.119	ENSCCAG00000025155	-	95	81.119	Cebus_capucinus
ENSSBOG00000027568	-	100	94.444	ENSCCAG00000026577	-	100	94.444	Cebus_capucinus
ENSSBOG00000027568	-	100	79.167	ENSCCAG00000028283	-	100	79.167	Cebus_capucinus
ENSSBOG00000027568	-	100	93.056	ENSCCAG00000019347	-	100	93.056	Cebus_capucinus
ENSSBOG00000027568	-	100	94.444	ENSCATG00000040697	MRPS18C	100	94.444	Cercocebus_atys
ENSSBOG00000027568	-	100	83.333	ENSCLAG00000017397	-	100	83.333	Chinchilla_lanigera
ENSSBOG00000027568	-	100	82.877	ENSCLAG00000008205	-	100	82.877	Chinchilla_lanigera
ENSSBOG00000027568	-	100	94.444	ENSCANG00000038907	MRPS18C	100	94.444	Colobus_angolensis_palliatus
ENSSBOG00000027568	-	100	77.083	ENSCANG00000041165	-	100	77.083	Colobus_angolensis_palliatus
ENSSBOG00000027568	-	97	81.416	ENSCANG00000037347	-	96	81.416	Colobus_angolensis_palliatus
ENSSBOG00000027568	-	100	84.028	ENSCGRG00001000103	Mrps18c	100	84.028	Cricetulus_griseus_chok1gshd
ENSSBOG00000027568	-	100	84.028	ENSCGRG00000002192	Mrps18c	100	84.028	Cricetulus_griseus_crigri
ENSSBOG00000027568	-	99	80.986	ENSDORG00000012749	Mrps18c	100	80.986	Dipodomys_ordii
ENSSBOG00000027568	-	100	55.634	ENSETEG00000012223	-	100	55.634	Echinops_telfairi
ENSSBOG00000027568	-	100	85.417	ENSEASG00005013234	MRPS18C	100	85.417	Equus_asinus_asinus
ENSSBOG00000027568	-	100	86.111	ENSECAG00000020387	MRPS18C	100	86.111	Equus_caballus
ENSSBOG00000027568	-	100	57.639	ENSEEUG00000003504	MRPS18C	99	57.639	Erinaceus_europaeus
ENSSBOG00000027568	-	100	83.333	ENSFCAG00000042464	MRPS18C	100	83.333	Felis_catus
ENSSBOG00000027568	-	100	71.528	ENSFDAG00000008778	-	100	71.528	Fukomys_damarensis
ENSSBOG00000027568	-	100	84.028	ENSFDAG00000000250	-	100	84.028	Fukomys_damarensis
ENSSBOG00000027568	-	100	76.389	ENSGGOG00000008603	MRPS18C	100	76.389	Gorilla_gorilla
ENSSBOG00000027568	-	100	75.000	ENSGGOG00000037903	-	100	75.000	Gorilla_gorilla
ENSSBOG00000027568	-	100	81.034	ENSGGOG00000040785	-	100	81.034	Gorilla_gorilla
ENSSBOG00000027568	-	100	84.247	ENSHGLG00000002953	-	100	84.247	Heterocephalus_glaber_female
ENSSBOG00000027568	-	100	78.472	ENSHGLG00000020134	-	100	78.472	Heterocephalus_glaber_female
ENSSBOG00000027568	-	100	77.778	ENSHGLG00000012671	-	98	77.778	Heterocephalus_glaber_female
ENSSBOG00000027568	-	100	84.247	ENSHGLG00100016235	-	100	84.247	Heterocephalus_glaber_male
ENSSBOG00000027568	-	100	78.472	ENSHGLG00100019678	-	100	78.472	Heterocephalus_glaber_male
ENSSBOG00000027568	-	100	77.778	ENSHGLG00100015568	-	98	77.778	Heterocephalus_glaber_male
ENSSBOG00000027568	-	100	83.333	ENSSTOG00000007989	MRPS18C	100	83.333	Ictidomys_tridecemlineatus
ENSSBOG00000027568	-	100	67.241	ENSJJAG00000022437	Mrps18c	100	67.241	Jaculus_jaculus
ENSSBOG00000027568	-	100	81.944	ENSLAFG00000001059	MRPS18C	100	81.944	Loxodonta_africana
ENSSBOG00000027568	-	100	93.056	ENSMFAG00000003991	MRPS18C	100	93.056	Macaca_fascicularis
ENSSBOG00000027568	-	100	75.000	ENSMFAG00000041276	-	100	75.000	Macaca_fascicularis
ENSSBOG00000027568	-	100	78.472	ENSMMUG00000039146	-	100	78.472	Macaca_mulatta
ENSSBOG00000027568	-	100	81.944	ENSMMUG00000048717	-	100	81.944	Macaca_mulatta
ENSSBOG00000027568	-	100	92.241	ENSMMUG00000015353	MRPS18C	100	92.241	Macaca_mulatta
ENSSBOG00000027568	-	100	93.056	ENSMNEG00000043663	MRPS18C	100	93.056	Macaca_nemestrina
ENSSBOG00000027568	-	100	70.833	ENSMNEG00000018700	-	100	70.833	Macaca_nemestrina
ENSSBOG00000027568	-	100	94.444	ENSMLEG00000038884	MRPS18C	100	94.444	Mandrillus_leucophaeus
ENSSBOG00000027568	-	100	78.632	ENSMICG00000037615	-	100	78.632	Microcebus_murinus
ENSSBOG00000027568	-	100	84.722	ENSMICG00000032609	-	100	84.722	Microcebus_murinus
ENSSBOG00000027568	-	100	81.944	ENSMOCG00000015591	-	100	81.944	Microtus_ochrogaster
ENSSBOG00000027568	-	100	79.861	ENSMOCG00000009898	-	100	79.861	Microtus_ochrogaster
ENSSBOG00000027568	-	99	72.603	ENSMODG00000020773	MRPS18C	100	72.603	Monodelphis_domestica
ENSSBOG00000027568	-	100	78.767	MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	Mus_caroli
ENSSBOG00000027568	-	100	77.397	ENSMUSG00000016833	Mrps18c	100	77.397	Mus_musculus
ENSSBOG00000027568	-	100	80.137	MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	Mus_pahari
ENSSBOG00000027568	-	83	76.230	MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	Mus_spretus
ENSSBOG00000027568	-	100	79.167	ENSMLUG00000017057	MRPS18C	100	79.167	Myotis_lucifugus
ENSSBOG00000027568	-	88	88.889	ENSNGAG00000015980	Mrps18c	100	84.722	Nannospalax_galili
ENSSBOG00000027568	-	100	86.301	ENSNLEG00000018188	-	100	86.301	Nomascus_leucogenys
ENSSBOG00000027568	-	100	92.361	ENSNLEG00000009119	MRPS18C	100	92.361	Nomascus_leucogenys
ENSSBOG00000027568	-	69	79.798	ENSOPRG00000004113	MRPS18C	68	79.798	Ochotona_princeps
ENSSBOG00000027568	-	100	80.556	ENSODEG00000020349	-	100	80.556	Octodon_degus
ENSSBOG00000027568	-	100	78.767	ENSODEG00000007599	-	100	78.767	Octodon_degus
ENSSBOG00000027568	-	100	82.639	ENSOARG00000002770	MRPS18C	100	82.639	Ovis_aries
ENSSBOG00000027568	-	100	92.361	ENSPPAG00000037122	MRPS18C	100	92.361	Pan_paniscus
ENSSBOG00000027568	-	100	75.862	ENSPPAG00000037400	-	100	75.862	Pan_paniscus
ENSSBOG00000027568	-	100	84.028	ENSPPRG00000011089	MRPS18C	100	84.028	Panthera_pardus
ENSSBOG00000027568	-	100	83.333	ENSPTIG00000021242	MRPS18C	100	83.333	Panthera_tigris_altaica
ENSSBOG00000027568	-	100	92.361	ENSPTRG00000016233	MRPS18C	100	92.361	Pan_troglodytes
ENSSBOG00000027568	-	100	75.000	ENSPTRG00000047058	-	100	75.000	Pan_troglodytes
ENSSBOG00000027568	-	100	93.056	ENSPANG00000033931	MRPS18C	100	93.056	Papio_anubis
ENSSBOG00000027568	-	100	78.472	ENSPANG00000034202	-	100	78.472	Papio_anubis
ENSSBOG00000027568	-	100	81.944	ENSPEMG00000008390	Mrps18c	100	81.944	Peromyscus_maniculatus_bairdii
ENSSBOG00000027568	-	71	90.196	ENSPCIG00000019737	-	100	90.196	Phascolarctos_cinereus
ENSSBOG00000027568	-	98	61.702	ENSPCIG00000000097	-	99	61.702	Phascolarctos_cinereus
ENSSBOG00000027568	-	92	75.188	ENSPCIG00000005376	-	94	75.188	Phascolarctos_cinereus
ENSSBOG00000027568	-	100	93.056	ENSPPYG00000025867	MRPS18C	100	93.056	Pongo_abelii
ENSSBOG00000027568	-	98	87.943	ENSPPYG00000025835	-	99	87.943	Pongo_abelii
ENSSBOG00000027568	-	100	82.639	ENSPCAG00000004975	MRPS18C	100	82.639	Procavia_capensis
ENSSBOG00000027568	-	100	85.417	ENSPCOG00000017634	MRPS18C	100	85.417	Propithecus_coquereli
ENSSBOG00000027568	-	69	77.778	ENSPVAG00000006439	MRPS18C	100	77.778	Pteropus_vampyrus
ENSSBOG00000027568	-	100	76.712	ENSRNOG00000002178	Mrps18c	100	76.712	Rattus_norvegicus
ENSSBOG00000027568	-	100	73.276	ENSRBIG00000031637	-	100	73.276	Rhinopithecus_bieti
ENSSBOG00000027568	-	100	79.167	ENSRBIG00000035023	-	100	79.167	Rhinopithecus_bieti
ENSSBOG00000027568	-	100	94.444	ENSRBIG00000041685	MRPS18C	100	94.444	Rhinopithecus_bieti
ENSSBOG00000027568	-	100	79.167	ENSRROG00000033834	-	100	79.167	Rhinopithecus_roxellana
ENSSBOG00000027568	-	100	94.444	ENSRROG00000044334	MRPS18C	100	94.444	Rhinopithecus_roxellana
ENSSBOG00000027568	-	100	72.414	ENSRROG00000030722	-	100	72.414	Rhinopithecus_roxellana
ENSSBOG00000027568	-	92	76.471	ENSSHAG00000007084	MRPS18C	94	76.471	Sarcophilus_harrisii
ENSSBOG00000027568	-	100	83.333	ENSSSCG00000038042	MRPS18C	100	83.333	Sus_scrofa
ENSSBOG00000027568	-	100	80.556	ENSTBEG00000012505	MRPS18C	100	80.556	Tupaia_belangeri
ENSSBOG00000027568	-	100	84.028	ENSTTRG00000004897	MRPS18C	100	84.028	Tursiops_truncatus
ENSSBOG00000027568	-	100	86.111	ENSUAMG00000012878	MRPS18C	100	86.111	Ursus_americanus
ENSSBOG00000027568	-	100	86.111	ENSUMAG00000008829	MRPS18C	100	86.111	Ursus_maritimus
ENSSBOG00000027568	-	100	82.639	ENSVPAG00000011358	MRPS18C	100	82.639	Vicugna_pacos
ENSSBOG00000027568	-	100	81.944	ENSVVUG00000015672	MRPS18C	100	81.944	Vulpes_vulpes