EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000027633 (Gene tree)
Gene ID: 101040147
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 41667 bases
Position: chrJH378152.1:12804972-12846638
Accession: 9898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000022412	RRM_1	PF00076.22	1.9e-30	1	3
ENSSBOP00000022412	RRM_1	PF00076.22	1.9e-30	2	3
ENSSBOP00000022412	RRM_1	PF00076.22	1.9e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000039269	RBM12-204	2194	XM_010342651	ENSSBOP00000022420	542 (aa)	XP_010340953	A0A2K6TRY6
ENSSBOT00000039243	RBM12-201	1791	-	ENSSBOP00000022394	596 (aa)	-	A0A2K6TRV0
ENSSBOT00000039247	RBM12-202	2002	XM_010342653	ENSSBOP00000022398	569 (aa)	XP_010340955	A0A2K6TS43
ENSSBOT00000039261	RBM12-203	5390	XM_010342659	ENSSBOP00000022412	953 (aa)	XP_010340961	A0A2K6TRY0

Gene Model

Click here to download ENSSBOG00000027633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000027633	RBM12	54	71.264	ENSSBOG00000027592	RBM12B	57	71.264
ENSSBOG00000027633	RBM12	50	30.337	ENSSBOG00000018361	HNRNPF	86	30.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027633	RBM12	98	98.283	ENSG00000244462	RBM12	100	98.969	Homo_sapiens
ENSSBOG00000027633	RBM12	98	95.596	ENSAMEG00000019189	RBM12	83	95.709	Ailuropoda_melanoleuca
ENSSBOG00000027633	RBM12	99	77.766	ENSACAG00000006330	RBM12	99	77.871	Anolis_carolinensis
ENSSBOG00000027633	RBM12	100	99.475	ENSANAG00000032596	RBM12	100	99.475	Aotus_nancymaae
ENSSBOG00000027633	RBM12	98	92.678	ENSBTAG00000044015	RBM12	83	92.317	Bos_taurus
ENSSBOG00000027633	RBM12	100	95.383	ENSCAFG00000008256	RBM12	98	92.424	Canis_familiaris
ENSSBOG00000027633	RBM12	98	95.381	ENSCAFG00020005650	RBM12	83	95.579	Canis_lupus_dingo
ENSSBOG00000027633	RBM12	98	94.844	ENSCHIG00000024592	RBM12	83	94.928	Capra_hircus
ENSSBOG00000027633	RBM12	100	94.124	ENSTSYG00000030563	RBM12	100	94.439	Carlito_syrichta
ENSSBOG00000027633	RBM12	84	84.578	ENSCAPG00000006176	RBM12	80	93.723	Cavia_aperea
ENSSBOG00000027633	RBM12	98	79.761	ENSCPOG00000035170	RBM12	100	93.723	Cavia_porcellus
ENSSBOG00000027633	RBM12	93	97.419	ENSCCAG00000036056	-	98	97.419	Cebus_capucinus
ENSSBOG00000027633	RBM12	90	93.229	ENSCCAG00000035899	-	100	73.605	Cebus_capucinus
ENSSBOG00000027633	RBM12	100	98.323	ENSCATG00000030934	RBM12	100	98.323	Cercocebus_atys
ENSSBOG00000027633	RBM12	98	94.092	ENSCLAG00000017230	RBM12	100	89.549	Chinchilla_lanigera
ENSSBOG00000027633	RBM12	100	98.428	ENSCANG00000030552	RBM12	100	98.428	Colobus_angolensis_palliatus
ENSSBOG00000027633	RBM12	98	80.280	ENSCGRG00001021144	Rbm12	100	85.513	Cricetulus_griseus_chok1gshd
ENSSBOG00000027633	RBM12	98	80.280	ENSCGRG00000012719	Rbm12	100	85.513	Cricetulus_griseus_crigri
ENSSBOG00000027633	RBM12	98	93.690	ENSDORG00000028509	-	100	93.262	Dipodomys_ordii
ENSSBOG00000027633	RBM12	98	73.617	ENSDORG00000000606	-	100	80.645	Dipodomys_ordii
ENSSBOG00000027633	RBM12	54	65.649	ENSEBUG00000016806	rbm12	99	65.649	Eptatretus_burgeri
ENSSBOG00000027633	RBM12	98	95.166	ENSECAG00000021997	RBM12	83	95.579	Equus_caballus
ENSSBOG00000027633	RBM12	98	94.200	ENSFDAG00000014663	RBM12	100	93.770	Fukomys_damarensis
ENSSBOG00000027633	RBM12	98	79.292	ENSGALG00000030253	RBM12	82	79.221	Gallus_gallus
ENSSBOG00000027633	RBM12	100	98.323	ENSGGOG00000028500	RBM12	100	98.323	Gorilla_gorilla
ENSSBOG00000027633	RBM12	98	94.200	ENSHGLG00000013208	RBM12	100	94.629	Heterocephalus_glaber_female
ENSSBOG00000027633	RBM12	88	97.022	ENSHGLG00100019158	RBM12	90	97.022	Heterocephalus_glaber_male
ENSSBOG00000027633	RBM12	98	90.536	ENSSTOG00000019739	RBM12	100	90.326	Ictidomys_tridecemlineatus
ENSSBOG00000027633	RBM12	98	93.985	ENSLAFG00000010341	RBM12	100	94.415	Loxodonta_africana
ENSSBOG00000027633	RBM12	100	98.323	ENSMFAG00000032583	RBM12	100	98.323	Macaca_fascicularis
ENSSBOG00000027633	RBM12	98	98.391	ENSMMUG00000020960	CPNE1	100	98.391	Macaca_mulatta
ENSSBOG00000027633	RBM12	100	98.428	ENSMNEG00000045365	RBM12	100	98.428	Macaca_nemestrina
ENSSBOG00000027633	RBM12	100	98.428	ENSMLEG00000032492	RBM12	100	98.428	Mandrillus_leucophaeus
ENSSBOG00000027633	RBM12	99	78.188	ENSMGAG00000001502	RBM12	83	79.091	Meleagris_gallopavo
ENSSBOG00000027633	RBM12	98	87.626	ENSMAUG00000012800	Rbm12	100	86.821	Mesocricetus_auratus
ENSSBOG00000027633	RBM12	73	85.079	ENSMICG00000029540	-	56	83.271	Microcebus_murinus
ENSSBOG00000027633	RBM12	100	93.914	ENSMICG00000032761	-	100	93.914	Microcebus_murinus
ENSSBOG00000027633	RBM12	98	79.940	ENSMOCG00000012950	Rbm12	100	92.351	Microtus_ochrogaster
ENSSBOG00000027633	RBM12	100	85.414	ENSMODG00000001591	RBM12	83	85.949	Monodelphis_domestica
ENSSBOG00000027633	RBM12	98	77.224	MGP_CAROLIEiJ_G0024551	Rbm12	98	93.010	Mus_caroli
ENSSBOG00000027633	RBM12	98	85.743	ENSMUSG00000089824	Rbm12	100	92.582	Mus_musculus
ENSSBOG00000027633	RBM12	98	77.712	MGP_PahariEiJ_G0025996	Rbm12	100	93.010	Mus_pahari
ENSSBOG00000027633	RBM12	71	94.118	MGP_SPRETEiJ_G0025473	Rbm12	100	83.300	Mus_spretus
ENSSBOG00000027633	RBM12	98	94.737	ENSMPUG00000017789	-	83	95.059	Mustela_putorius_furo
ENSSBOG00000027633	RBM12	100	94.753	ENSMLUG00000011217	RBM12	83	94.690	Myotis_lucifugus
ENSSBOG00000027633	RBM12	98	87.450	ENSNGAG00000015846	Rbm12	100	86.446	Nannospalax_galili
ENSSBOG00000027633	RBM12	100	98.008	ENSNLEG00000010268	RBM12	100	98.008	Nomascus_leucogenys
ENSSBOG00000027633	RBM12	98	85.070	ENSMEUG00000007621	RBM12	82	85.417	Notamacropus_eugenii
ENSSBOG00000027633	RBM12	98	92.455	ENSOPRG00000005687	RBM12	100	92.030	Ochotona_princeps
ENSSBOG00000027633	RBM12	84	89.505	ENSODEG00000013870	RBM12	82	89.625	Octodon_degus
ENSSBOG00000027633	RBM12	100	98.323	ENSPPAG00000040719	RBM12	100	98.323	Pan_paniscus
ENSSBOG00000027633	RBM12	100	98.323	ENSPTRG00000013446	RBM12	100	98.323	Pan_troglodytes
ENSSBOG00000027633	RBM12	100	98.323	ENSPTRG00000040708	-	100	98.323	Pan_troglodytes
ENSSBOG00000027633	RBM12	100	98.428	ENSPANG00000020003	CPNE1	100	98.428	Papio_anubis
ENSSBOG00000027633	RBM12	89	85.821	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSSBOG00000027633	RBM12	98	79.584	ENSPEMG00000017769	Rbm12	100	84.508	Peromyscus_maniculatus_bairdii
ENSSBOG00000027633	RBM12	62	78.571	ENSPFOG00000023551	rbm12	90	78.873	Poecilia_formosa
ENSSBOG00000027633	RBM12	98	98.180	ENSPPYG00000010960	RBM12	100	98.180	Pongo_abelii
ENSSBOG00000027633	RBM12	98	92.589	ENSPCAG00000008653	RBM12	83	93.758	Procavia_capensis
ENSSBOG00000027633	RBM12	100	96.013	ENSPCOG00000023724	RBM12	100	96.013	Propithecus_coquereli
ENSSBOG00000027633	RBM12	81	94.928	ENSPVAG00000014937	RBM12	83	94.928	Pteropus_vampyrus
ENSSBOG00000027633	RBM12	74	92.725	ENSRNOG00000049913	LOC100910990	82	92.725	Rattus_norvegicus
ENSSBOG00000027633	RBM12	74	92.725	ENSRNOG00000019723	Rbm12	82	92.725	Rattus_norvegicus
ENSSBOG00000027633	RBM12	100	98.637	ENSRBIG00000042965	RBM12	100	98.637	Rhinopithecus_bieti
ENSSBOG00000027633	RBM12	100	98.637	ENSRROG00000037485	RBM12	100	98.637	Rhinopithecus_roxellana
ENSSBOG00000027633	RBM12	98	85.607	ENSSHAG00000018585	RBM12	82	86.198	Sarcophilus_harrisii
ENSSBOG00000027633	RBM12	98	95.085	ENSSSCG00000036156	RBM12	83	95.220	Sus_scrofa
ENSSBOG00000027633	RBM12	98	79.807	ENSTGUG00000003002	RBM12	82	78.934	Taeniopygia_guttata
ENSSBOG00000027633	RBM12	98	94.844	ENSTTRG00000017035	RBM12	83	95.189	Tursiops_truncatus
ENSSBOG00000027633	RBM12	98	93.555	ENSUAMG00000010430	RBM12	83	95.189	Ursus_americanus
ENSSBOG00000027633	RBM12	86	100.000	ENSVPAG00000003812	RBM12	86	100.000	Vicugna_pacos
ENSSBOG00000027633	RBM12	98	60.423	ENSXETG00000033541	RBM12	81	59.974	Xenopus_tropicalis