EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000027672 (Gene tree)
Gene ID: 101040120
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 76529 bases
Position: chrJH378129.1:11591069-11667597
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000022282	Npa1	PF11707.8	2.7e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000039129	URB1-201	7804	XM_010338325	ENSSBOP00000022282	2272 (aa)	XP_010336627	A0A2K6TRI9

Gene Model

Click here to download ENSSBOG00000027672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027672	URB1	99	92.797	ENSG00000142207	URB1	100	92.694	Homo_sapiens
ENSSBOG00000027672	URB1	96	48.068	ENSAPOG00000020308	urb1	98	48.513	Acanthochromis_polyacanthus
ENSSBOG00000027672	URB1	100	81.478	ENSAMEG00000011998	URB1	99	81.522	Ailuropoda_melanoleuca
ENSSBOG00000027672	URB1	94	44.714	ENSACIG00000003248	urb1	96	44.807	Amphilophus_citrinellus
ENSSBOG00000027672	URB1	99	41.202	ENSAOCG00000010364	urb1	99	41.469	Amphiprion_ocellaris
ENSSBOG00000027672	URB1	97	53.115	ENSAPEG00000010758	urb1	98	53.838	Amphiprion_percula
ENSSBOG00000027672	URB1	99	43.637	ENSATEG00000011790	urb1	97	44.400	Anabas_testudineus
ENSSBOG00000027672	URB1	97	56.557	ENSAPLG00000012791	URB1	100	56.467	Anas_platyrhynchos
ENSSBOG00000027672	URB1	99	53.846	ENSACAG00000002817	URB1	98	53.792	Anolis_carolinensis
ENSSBOG00000027672	URB1	100	95.158	ENSANAG00000024617	URB1	100	95.158	Aotus_nancymaae
ENSSBOG00000027672	URB1	99	44.974	ENSACLG00000024865	urb1	99	44.822	Astatotilapia_calliptera
ENSSBOG00000027672	URB1	99	39.588	ENSAMXG00000012306	urb1	99	39.762	Astyanax_mexicanus
ENSSBOG00000027672	URB1	99	77.651	ENSBTAG00000012412	URB1	99	77.651	Bos_taurus
ENSSBOG00000027672	URB1	100	94.200	ENSCJAG00000009118	URB1	100	94.200	Callithrix_jacchus
ENSSBOG00000027672	URB1	100	81.667	ENSCAFG00000008892	URB1	100	81.667	Canis_familiaris
ENSSBOG00000027672	URB1	100	81.626	ENSCAFG00020025987	-	100	81.626	Canis_lupus_dingo
ENSSBOG00000027672	URB1	100	80.791	ENSCAFG00020025994	-	100	80.791	Canis_lupus_dingo
ENSSBOG00000027672	URB1	99	77.301	ENSCHIG00000015645	URB1	99	77.344	Capra_hircus
ENSSBOG00000027672	URB1	100	85.475	ENSTSYG00000013286	URB1	99	85.475	Carlito_syrichta
ENSSBOG00000027672	URB1	98	79.092	ENSCAPG00000015589	URB1	99	79.092	Cavia_aperea
ENSSBOG00000027672	URB1	99	80.246	ENSCPOG00000006748	URB1	99	80.246	Cavia_porcellus
ENSSBOG00000027672	URB1	100	95.995	ENSCCAG00000021299	URB1	100	95.995	Cebus_capucinus
ENSSBOG00000027672	URB1	100	92.342	ENSCATG00000042630	URB1	100	92.342	Cercocebus_atys
ENSSBOG00000027672	URB1	100	80.492	ENSCLAG00000005262	URB1	100	80.492	Chinchilla_lanigera
ENSSBOG00000027672	URB1	100	90.578	ENSCSAG00000009584	URB1	100	90.578	Chlorocebus_sabaeus
ENSSBOG00000027672	URB1	99	59.397	ENSCPBG00000006454	URB1	99	59.612	Chrysemys_picta_bellii
ENSSBOG00000027672	URB1	100	92.342	ENSCANG00000031088	URB1	100	92.342	Colobus_angolensis_palliatus
ENSSBOG00000027672	URB1	99	76.447	ENSCGRG00001010616	Urb1	99	76.199	Cricetulus_griseus_chok1gshd
ENSSBOG00000027672	URB1	98	76.225	ENSCGRG00000015840	Urb1	99	76.293	Cricetulus_griseus_crigri
ENSSBOG00000027672	URB1	99	41.927	ENSCSEG00000012616	urb1	99	41.840	Cynoglossus_semilaevis
ENSSBOG00000027672	URB1	97	52.239	ENSCVAG00000009076	urb1	99	52.478	Cyprinodon_variegatus
ENSSBOG00000027672	URB1	99	42.788	ENSDARG00000060308	urb1	99	43.129	Danio_rerio
ENSSBOG00000027672	URB1	85	80.807	ENSDNOG00000015586	URB1	99	80.807	Dasypus_novemcinctus
ENSSBOG00000027672	URB1	100	79.938	ENSDORG00000006735	Urb1	100	79.938	Dipodomys_ordii
ENSSBOG00000027672	URB1	92	80.182	ENSETEG00000009080	URB1	92	80.182	Echinops_telfairi
ENSSBOG00000027672	URB1	100	81.962	ENSEASG00005007711	URB1	100	81.890	Equus_asinus_asinus
ENSSBOG00000027672	URB1	97	88.523	ENSECAG00000013206	URB1	100	88.523	Equus_caballus
ENSSBOG00000027672	URB1	58	86.250	ENSEEUG00000003626	-	57	86.250	Erinaceus_europaeus
ENSSBOG00000027672	URB1	99	44.686	ENSELUG00000020516	urb1	98	44.783	Esox_lucius
ENSSBOG00000027672	URB1	100	81.135	ENSFCAG00000002177	URB1	100	81.091	Felis_catus
ENSSBOG00000027672	URB1	98	51.393	ENSFALG00000004636	URB1	99	51.557	Ficedula_albicollis
ENSSBOG00000027672	URB1	100	80.254	ENSFDAG00000007288	URB1	95	80.254	Fukomys_damarensis
ENSSBOG00000027672	URB1	99	41.261	ENSFHEG00000000202	urb1	99	41.759	Fundulus_heteroclitus
ENSSBOG00000027672	URB1	92	48.000	ENSGMOG00000001838	urb1	93	47.826	Gadus_morhua
ENSSBOG00000027672	URB1	99	57.162	ENSGALG00000015887	URB1	99	57.187	Gallus_gallus
ENSSBOG00000027672	URB1	94	53.319	ENSGAFG00000020694	urb1	97	53.571	Gambusia_affinis
ENSSBOG00000027672	URB1	99	44.357	ENSGACG00000011703	urb1	99	44.376	Gasterosteus_aculeatus
ENSSBOG00000027672	URB1	99	58.759	ENSGAGG00000022544	URB1	99	58.969	Gopherus_agassizii
ENSSBOG00000027672	URB1	100	92.870	ENSGGOG00000000285	URB1	100	92.870	Gorilla_gorilla
ENSSBOG00000027672	URB1	99	44.974	ENSHBUG00000001904	urb1	99	44.822	Haplochromis_burtoni
ENSSBOG00000027672	URB1	99	78.596	ENSHGLG00000004907	URB1	99	78.596	Heterocephalus_glaber_female
ENSSBOG00000027672	URB1	99	79.368	ENSHGLG00100010749	URB1	99	79.368	Heterocephalus_glaber_male
ENSSBOG00000027672	URB1	74	47.647	ENSHCOG00000018683	urb1	97	48.039	Hippocampus_comes
ENSSBOG00000027672	URB1	99	40.456	ENSIPUG00000014721	urb1	99	40.201	Ictalurus_punctatus
ENSSBOG00000027672	URB1	100	82.689	ENSSTOG00000004539	URB1	100	82.689	Ictidomys_tridecemlineatus
ENSSBOG00000027672	URB1	96	47.430	ENSKMAG00000006001	urb1	98	47.645	Kryptolebias_marmoratus
ENSSBOG00000027672	URB1	97	41.398	ENSLBEG00000027208	urb1	99	51.868	Labrus_bergylta
ENSSBOG00000027672	URB1	99	48.702	ENSLACG00000017059	URB1	99	49.039	Latimeria_chalumnae
ENSSBOG00000027672	URB1	99	45.824	ENSLOCG00000009190	urb1	99	45.781	Lepisosteus_oculatus
ENSSBOG00000027672	URB1	99	78.957	ENSLAFG00000010407	URB1	100	78.957	Loxodonta_africana
ENSSBOG00000027672	URB1	100	92.474	ENSMFAG00000034391	URB1	97	92.474	Macaca_fascicularis
ENSSBOG00000027672	URB1	100	92.342	ENSMMUG00000010295	URB1	100	92.342	Macaca_mulatta
ENSSBOG00000027672	URB1	100	91.021	ENSMNEG00000032981	URB1	100	91.021	Macaca_nemestrina
ENSSBOG00000027672	URB1	100	92.694	ENSMLEG00000041435	URB1	100	92.694	Mandrillus_leucophaeus
ENSSBOG00000027672	URB1	99	43.188	ENSMAMG00000011238	urb1	99	43.197	Mastacembelus_armatus
ENSSBOG00000027672	URB1	99	40.744	ENSMZEG00005011862	urb1	99	41.733	Maylandia_zebra
ENSSBOG00000027672	URB1	98	58.115	ENSMGAG00000014512	URB1	99	57.937	Meleagris_gallopavo
ENSSBOG00000027672	URB1	92	79.416	ENSMAUG00000010516	Urb1	99	79.381	Mesocricetus_auratus
ENSSBOG00000027672	URB1	99	84.903	ENSMICG00000016424	URB1	99	84.903	Microcebus_murinus
ENSSBOG00000027672	URB1	99	74.813	ENSMOCG00000012613	Urb1	99	74.593	Microtus_ochrogaster
ENSSBOG00000027672	URB1	99	64.167	ENSMODG00000021076	URB1	99	63.860	Monodelphis_domestica
ENSSBOG00000027672	URB1	96	52.532	ENSMALG00000017411	urb1	99	53.219	Monopterus_albus
ENSSBOG00000027672	URB1	99	76.121	MGP_CAROLIEiJ_G0020948	Urb1	99	76.121	Mus_caroli
ENSSBOG00000027672	URB1	99	76.385	ENSMUSG00000039929	Urb1	99	76.385	Mus_musculus
ENSSBOG00000027672	URB1	99	76.561	MGP_PahariEiJ_G0016653	Urb1	99	76.561	Mus_pahari
ENSSBOG00000027672	URB1	99	76.155	MGP_SPRETEiJ_G0021854	Urb1	99	76.155	Mus_spretus
ENSSBOG00000027672	URB1	100	79.850	ENSMPUG00000001123	URB1	100	79.850	Mustela_putorius_furo
ENSSBOG00000027672	URB1	99	77.641	ENSNGAG00000001905	Urb1	99	77.641	Nannospalax_galili
ENSSBOG00000027672	URB1	82	45.386	ENSNBRG00000001049	urb1	98	45.664	Neolamprologus_brichardi
ENSSBOG00000027672	URB1	99	91.162	ENSNLEG00000026872	URB1	100	91.065	Nomascus_leucogenys
ENSSBOG00000027672	URB1	96	59.155	ENSMEUG00000010828	URB1	96	59.155	Notamacropus_eugenii
ENSSBOG00000027672	URB1	99	73.913	ENSOPRG00000013482	URB1	100	73.913	Ochotona_princeps
ENSSBOG00000027672	URB1	100	78.779	ENSODEG00000002587	URB1	99	78.779	Octodon_degus
ENSSBOG00000027672	URB1	99	44.847	ENSONIG00000005599	urb1	99	45.018	Oreochromis_niloticus
ENSSBOG00000027672	URB1	99	80.713	ENSOCUG00000009381	URB1	99	80.713	Oryctolagus_cuniculus
ENSSBOG00000027672	URB1	99	43.289	ENSORLG00000003429	urb1	99	43.329	Oryzias_latipes
ENSSBOG00000027672	URB1	99	42.926	ENSORLG00020013785	urb1	99	42.964	Oryzias_latipes_hni
ENSSBOG00000027672	URB1	95	46.192	ENSORLG00015019421	urb1	97	46.255	Oryzias_latipes_hsok
ENSSBOG00000027672	URB1	77	50.117	ENSOMEG00000002094	urb1	98	51.174	Oryzias_melastigma
ENSSBOG00000027672	URB1	99	83.972	ENSOGAG00000017140	URB1	100	83.972	Otolemur_garnettii
ENSSBOG00000027672	URB1	97	78.069	ENSOARG00000013679	URB1	99	78.069	Ovis_aries
ENSSBOG00000027672	URB1	100	92.958	ENSPPAG00000003423	URB1	100	92.958	Pan_paniscus
ENSSBOG00000027672	URB1	100	81.346	ENSPPRG00000023131	URB1	100	81.346	Panthera_pardus
ENSSBOG00000027672	URB1	93	79.536	ENSPTIG00000016125	URB1	98	80.020	Panthera_tigris_altaica
ENSSBOG00000027672	URB1	100	92.914	ENSPTRG00000013852	URB1	100	92.914	Pan_troglodytes
ENSSBOG00000027672	URB1	100	92.738	ENSPANG00000021964	URB1	100	92.738	Papio_anubis
ENSSBOG00000027672	URB1	99	45.892	ENSPKIG00000003683	urb1	98	46.011	Paramormyrops_kingsleyae
ENSSBOG00000027672	URB1	100	76.460	ENSPEMG00000021205	Urb1	99	76.460	Peromyscus_maniculatus_bairdii
ENSSBOG00000027672	URB1	80	34.119	ENSPMAG00000009733	URB1	100	34.119	Petromyzon_marinus
ENSSBOG00000027672	URB1	99	63.875	ENSPCIG00000016350	URB1	99	63.923	Phascolarctos_cinereus
ENSSBOG00000027672	URB1	96	43.347	ENSPLAG00000004371	urb1	99	43.347	Poecilia_latipinna
ENSSBOG00000027672	URB1	98	44.000	ENSPMEG00000006634	urb1	98	44.062	Poecilia_mexicana
ENSSBOG00000027672	URB1	98	43.995	ENSPREG00000013453	urb1	98	44.102	Poecilia_reticulata
ENSSBOG00000027672	URB1	99	92.532	ENSPPYG00000011359	URB1	100	92.386	Pongo_abelii
ENSSBOG00000027672	URB1	99	67.019	ENSPCAG00000007430	URB1	99	67.019	Procavia_capensis
ENSSBOG00000027672	URB1	100	85.915	ENSPCOG00000022695	URB1	100	85.915	Propithecus_coquereli
ENSSBOG00000027672	URB1	100	79.894	ENSPVAG00000000889	URB1	100	79.894	Pteropus_vampyrus
ENSSBOG00000027672	URB1	99	43.476	ENSPNYG00000010589	urb1	99	43.324	Pundamilia_nyererei
ENSSBOG00000027672	URB1	99	40.527	ENSPNAG00000019324	urb1	99	40.650	Pygocentrus_nattereri
ENSSBOG00000027672	URB1	99	76.000	ENSRNOG00000002080	Urb1	99	76.132	Rattus_norvegicus
ENSSBOG00000027672	URB1	100	91.989	ENSRBIG00000033122	URB1	100	91.989	Rhinopithecus_bieti
ENSSBOG00000027672	URB1	100	92.033	ENSRROG00000040237	URB1	100	92.033	Rhinopithecus_roxellana
ENSSBOG00000027672	URB1	99	63.823	ENSSHAG00000005140	URB1	100	63.497	Sarcophilus_harrisii
ENSSBOG00000027672	URB1	91	46.158	ENSSFOG00015000339	urb1	98	45.963	Scleropages_formosus
ENSSBOG00000027672	URB1	99	43.918	ENSSMAG00000003782	urb1	99	44.046	Scophthalmus_maximus
ENSSBOG00000027672	URB1	99	44.784	ENSSDUG00000012313	urb1	99	44.855	Seriola_dumerili
ENSSBOG00000027672	URB1	99	44.788	ENSSLDG00000023179	urb1	99	44.614	Seriola_lalandi_dorsalis
ENSSBOG00000027672	URB1	99	55.754	ENSSPUG00000012447	URB1	99	55.754	Sphenodon_punctatus
ENSSBOG00000027672	URB1	99	44.444	ENSSPAG00000006325	urb1	99	44.654	Stegastes_partitus
ENSSBOG00000027672	URB1	100	79.130	ENSSSCG00000032024	URB1	100	79.130	Sus_scrofa
ENSSBOG00000027672	URB1	73	57.945	ENSTGUG00000013442	URB1	100	57.945	Taeniopygia_guttata
ENSSBOG00000027672	URB1	99	44.119	ENSTRUG00000009372	urb1	99	43.982	Takifugu_rubripes
ENSSBOG00000027672	URB1	99	43.001	ENSTNIG00000016277	urb1	99	42.995	Tetraodon_nigroviridis
ENSSBOG00000027672	URB1	81	84.638	ENSTBEG00000010044	URB1	81	84.638	Tupaia_belangeri
ENSSBOG00000027672	URB1	91	79.184	ENSTTRG00000007712	URB1	92	79.393	Tursiops_truncatus
ENSSBOG00000027672	URB1	100	81.302	ENSUAMG00000012231	URB1	99	81.302	Ursus_americanus
ENSSBOG00000027672	URB1	94	81.539	ENSUMAG00000017419	URB1	99	82.150	Ursus_maritimus
ENSSBOG00000027672	URB1	68	86.508	ENSVPAG00000001164	URB1	68	86.508	Vicugna_pacos
ENSSBOG00000027672	URB1	100	81.291	ENSVVUG00000000551	URB1	100	81.291	Vulpes_vulpes
ENSSBOG00000027672	URB1	99	50.066	ENSXETG00000009895	urb1	99	50.153	Xenopus_tropicalis
ENSSBOG00000027672	URB1	99	41.480	ENSXCOG00000005500	urb1	99	41.530	Xiphophorus_couchianus
ENSSBOG00000027672	URB1	99	41.568	ENSXMAG00000007253	urb1	99	41.589	Xiphophorus_maculatus