EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000027830 (Gene tree)
Gene ID: 101045011
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 11020 bases
Position: chrJH378113.1:26093036-26104055
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000022591	RRM_5	PF13893.6	1e-07	1	1
ENSSBOP00000022602	RRM_5	PF13893.6	1.9e-07	1	1
ENSSBOP00000022591	RRM_1	PF00076.22	3.5e-19	1	1
ENSSBOP00000022602	RRM_1	PF00076.22	5.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000039452	-	795	XM_003945172	ENSSBOP00000022602	264 (aa)	XP_003945221	A0A2K6TSG8
ENSSBOT00000039441	-	636	-	ENSSBOP00000022591	211 (aa)	-	A0A2K6TSF9

Gene Model

Click here to download ENSSBOG00000027830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000027830	-	51	33.645	ENSSBOG00000034106	TIA1	59	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027830	-	100	92.884	ENSG00000076053	RBM7	99	98.649	Homo_sapiens
ENSSBOG00000027830	-	96	42.697	ENSAPOG00000012768	rbm7	97	41.667	Acanthochromis_polyacanthus
ENSSBOG00000027830	-	100	89.015	ENSAMEG00000013276	-	100	89.015	Ailuropoda_melanoleuca
ENSSBOG00000027830	-	96	42.804	ENSAOCG00000004178	rbm7	97	41.418	Amphiprion_ocellaris
ENSSBOG00000027830	-	96	42.804	ENSAPEG00000021981	rbm7	97	41.418	Amphiprion_percula
ENSSBOG00000027830	-	84	57.895	ENSAPLG00000005180	-	100	56.195	Anas_platyrhynchos
ENSSBOG00000027830	-	100	48.252	ENSACAG00000011589	-	100	49.650	Anolis_carolinensis
ENSSBOG00000027830	-	69	98.639	ENSANAG00000031879	-	94	99.320	Aotus_nancymaae
ENSSBOG00000027830	-	71	90.728	ENSANAG00000031340	-	100	97.436	Aotus_nancymaae
ENSSBOG00000027830	-	67	55.172	ENSACLG00000001203	rbm7	52	55.172	Astatotilapia_calliptera
ENSSBOG00000027830	-	98	47.312	ENSAMXG00000037251	rbm7	99	44.755	Astyanax_mexicanus
ENSSBOG00000027830	-	100	86.142	ENSBTAG00000008219	RBM7	100	85.768	Bos_taurus
ENSSBOG00000027830	-	100	95.833	ENSCJAG00000011949	-	100	95.833	Callithrix_jacchus
ENSSBOG00000027830	-	100	86.742	ENSCAFG00000013514	-	100	86.364	Canis_familiaris
ENSSBOG00000027830	-	100	87.121	ENSCAFG00020002518	-	97	93.960	Canis_lupus_dingo
ENSSBOG00000027830	-	100	86.142	ENSCHIG00000008632	-	100	85.019	Capra_hircus
ENSSBOG00000027830	-	100	86.142	ENSCHIG00000010879	-	100	85.019	Capra_hircus
ENSSBOG00000027830	-	100	86.891	ENSTSYG00000013731	-	100	85.393	Carlito_syrichta
ENSSBOG00000027830	-	88	85.106	ENSCAPG00000012045	-	100	83.830	Cavia_aperea
ENSSBOG00000027830	-	90	83.402	ENSCPOG00000034273	-	100	82.158	Cavia_porcellus
ENSSBOG00000027830	-	100	94.697	ENSCCAG00000036534	-	100	94.697	Cebus_capucinus
ENSSBOG00000027830	-	100	93.633	ENSCATG00000037361	-	100	91.760	Cercocebus_atys
ENSSBOG00000027830	-	100	84.015	ENSCLAG00000014875	-	100	82.528	Chinchilla_lanigera
ENSSBOG00000027830	-	100	93.680	ENSCSAG00000002756	-	100	91.822	Chlorocebus_sabaeus
ENSSBOG00000027830	-	69	89.865	ENSCHOG00000012747	-	100	94.595	Choloepus_hoffmanni
ENSSBOG00000027830	-	100	56.000	ENSCPBG00000009366	-	90	69.461	Chrysemys_picta_bellii
ENSSBOG00000027830	-	100	94.007	ENSCANG00000031398	-	100	92.135	Colobus_angolensis_palliatus
ENSSBOG00000027830	-	100	83.521	ENSCGRG00001019236	Rbm7	100	83.146	Cricetulus_griseus_chok1gshd
ENSSBOG00000027830	-	100	83.521	ENSCGRG00000005045	Rbm7	100	83.146	Cricetulus_griseus_crigri
ENSSBOG00000027830	-	98	40.659	ENSCSEG00000002160	rbm7	62	46.061	Cynoglossus_semilaevis
ENSSBOG00000027830	-	97	40.149	ENSCVAG00000023415	rbm7	97	37.818	Cyprinodon_variegatus
ENSSBOG00000027830	-	57	46.667	ENSDARG00000090202	rbm11	55	53.409	Danio_rerio
ENSSBOG00000027830	-	98	42.424	ENSDARG00000020841	rbm7	99	41.392	Danio_rerio
ENSSBOG00000027830	-	100	90.637	ENSDNOG00000018423	-	100	89.513	Dasypus_novemcinctus
ENSSBOG00000027830	-	100	84.270	ENSDORG00000029149	Rbm7	100	80.899	Dipodomys_ordii
ENSSBOG00000027830	-	100	79.478	ENSETEG00000015869	-	100	77.985	Echinops_telfairi
ENSSBOG00000027830	-	100	88.015	ENSEASG00005006676	-	100	85.019	Equus_asinus_asinus
ENSSBOG00000027830	-	100	86.142	ENSECAG00000004636	-	100	85.019	Equus_caballus
ENSSBOG00000027830	-	98	73.664	ENSEEUG00000015854	-	98	72.901	Erinaceus_europaeus
ENSSBOG00000027830	-	98	46.269	ENSELUG00000017868	rbm7	99	47.566	Esox_lucius
ENSSBOG00000027830	-	100	85.768	ENSFCAG00000040484	-	100	85.768	Felis_catus
ENSSBOG00000027830	-	97	50.741	ENSFALG00000010039	-	88	50.181	Ficedula_albicollis
ENSSBOG00000027830	-	100	83.521	ENSFDAG00000010616	-	100	82.772	Fukomys_damarensis
ENSSBOG00000027830	-	98	38.290	ENSGMOG00000013362	rbm7	88	37.175	Gadus_morhua
ENSSBOG00000027830	-	100	55.052	ENSGALG00000007017	RBM7	100	52.962	Gallus_gallus
ENSSBOG00000027830	-	70	54.605	ENSGAFG00000000870	rbm7	60	48.485	Gambusia_affinis
ENSSBOG00000027830	-	72	52.258	ENSGACG00000006628	rbm7	98	40.370	Gasterosteus_aculeatus
ENSSBOG00000027830	-	100	59.801	ENSGAGG00000021127	-	100	56.146	Gopherus_agassizii
ENSSBOG00000027830	-	99	89.954	ENSGGOG00000009941	-	99	89.954	Gorilla_gorilla
ENSSBOG00000027830	-	67	53.793	ENSHBUG00000004319	rbm7	52	53.793	Haplochromis_burtoni
ENSSBOG00000027830	-	100	75.836	ENSHGLG00000002486	-	95	75.465	Heterocephalus_glaber_female
ENSSBOG00000027830	-	70	71.429	ENSHGLG00000013918	-	100	68.212	Heterocephalus_glaber_female
ENSSBOG00000027830	-	99	79.623	ENSHGLG00000014428	-	98	79.245	Heterocephalus_glaber_female
ENSSBOG00000027830	-	96	81.641	ENSHGLG00000016655	-	98	80.078	Heterocephalus_glaber_female
ENSSBOG00000027830	-	100	85.768	ENSHGLG00000018700	RBM7	100	84.270	Heterocephalus_glaber_female
ENSSBOG00000027830	-	70	71.429	ENSHGLG00100015249	-	100	68.212	Heterocephalus_glaber_male
ENSSBOG00000027830	-	99	79.623	ENSHGLG00100011703	-	98	79.245	Heterocephalus_glaber_male
ENSSBOG00000027830	-	100	61.364	ENSHGLG00100005739	-	94	61.364	Heterocephalus_glaber_male
ENSSBOG00000027830	-	100	87.266	ENSHGLG00100005358	-	100	86.517	Heterocephalus_glaber_male
ENSSBOG00000027830	-	96	81.641	ENSHGLG00100009317	-	98	80.078	Heterocephalus_glaber_male
ENSSBOG00000027830	-	100	75.836	ENSHGLG00100011792	-	95	75.465	Heterocephalus_glaber_male
ENSSBOG00000027830	-	98	46.691	ENSIPUG00000009397	rbm7	98	46.269	Ictalurus_punctatus
ENSSBOG00000027830	-	96	71.654	ENSSTOG00000031973	-	100	68.110	Ictidomys_tridecemlineatus
ENSSBOG00000027830	-	100	82.022	ENSSTOG00000012459	-	100	81.273	Ictidomys_tridecemlineatus
ENSSBOG00000027830	-	99	77.444	ENSJJAG00000016540	-	100	76.316	Jaculus_jaculus
ENSSBOG00000027830	-	100	85.768	ENSJJAG00000011823	-	100	84.644	Jaculus_jaculus
ENSSBOG00000027830	-	96	41.606	ENSLBEG00000024902	rbm7	97	39.130	Labrus_bergylta
ENSSBOG00000027830	-	98	57.621	ENSLACG00000018620	-	99	56.134	Latimeria_chalumnae
ENSSBOG00000027830	-	99	46.953	ENSLOCG00000002408	rbm7	99	46.237	Lepisosteus_oculatus
ENSSBOG00000027830	-	100	82.090	ENSLAFG00000012444	-	100	80.224	Loxodonta_africana
ENSSBOG00000027830	-	100	94.007	ENSMFAG00000000965	-	100	92.135	Macaca_fascicularis
ENSSBOG00000027830	-	100	91.386	ENSMMUG00000012270	RBM7	100	89.139	Macaca_mulatta
ENSSBOG00000027830	-	100	93.633	ENSMNEG00000005397	-	100	91.760	Macaca_nemestrina
ENSSBOG00000027830	-	100	93.633	ENSMLEG00000041953	-	100	91.760	Mandrillus_leucophaeus
ENSSBOG00000027830	-	98	41.304	ENSMAMG00000014145	rbm7	99	39.928	Mastacembelus_armatus
ENSSBOG00000027830	-	67	54.483	ENSMZEG00005013295	rbm7	52	54.483	Maylandia_zebra
ENSSBOG00000027830	-	100	56.140	ENSMGAG00000003004	-	100	53.898	Meleagris_gallopavo
ENSSBOG00000027830	-	100	80.899	ENSMAUG00000001942	-	100	80.150	Mesocricetus_auratus
ENSSBOG00000027830	-	68	89.583	ENSMAUG00000017938	-	93	89.583	Mesocricetus_auratus
ENSSBOG00000027830	-	100	86.131	ENSMICG00000042981	-	100	84.672	Microcebus_murinus
ENSSBOG00000027830	-	100	81.648	ENSMOCG00000009674	Rbm7	100	80.524	Microtus_ochrogaster
ENSSBOG00000027830	-	61	47.794	ENSMMOG00000004967	rbm7	68	60.563	Mola_mola
ENSSBOG00000027830	-	100	74.368	ENSMODG00000013918	-	100	72.924	Monodelphis_domestica
ENSSBOG00000027830	-	89	38.618	ENSMALG00000010901	rbm7	60	46.154	Monopterus_albus
ENSSBOG00000027830	-	100	82.090	MGP_CAROLIEiJ_G0032167	Rbm7	100	81.716	Mus_caroli
ENSSBOG00000027830	-	100	82.772	ENSMUSG00000042396	Rbm7	100	82.397	Mus_musculus
ENSSBOG00000027830	-	100	83.146	MGP_PahariEiJ_G0015035	Rbm7	100	82.772	Mus_pahari
ENSSBOG00000027830	-	100	80.524	MGP_SPRETEiJ_G0033306	Rbm7	100	80.150	Mus_spretus
ENSSBOG00000027830	-	100	88.258	ENSMPUG00000003941	-	100	88.636	Mustela_putorius_furo
ENSSBOG00000027830	-	98	81.749	ENSMLUG00000023234	-	99	80.989	Myotis_lucifugus
ENSSBOG00000027830	-	100	83.895	ENSNGAG00000006244	-	100	83.146	Nannospalax_galili
ENSSBOG00000027830	-	67	54.483	ENSNBRG00000017104	rbm7	52	54.483	Neolamprologus_brichardi
ENSSBOG00000027830	-	100	94.007	ENSNLEG00000029494	-	100	92.135	Nomascus_leucogenys
ENSSBOG00000027830	-	100	63.941	ENSMEUG00000006187	-	100	63.197	Notamacropus_eugenii
ENSSBOG00000027830	-	100	78.652	ENSOPRG00000011060	-	100	77.903	Ochotona_princeps
ENSSBOG00000027830	-	98	64.368	ENSODEG00000000186	-	96	63.178	Octodon_degus
ENSSBOG00000027830	-	70	88.514	ENSODEG00000010164	-	99	93.243	Octodon_degus
ENSSBOG00000027830	-	100	66.292	ENSODEG00000016844	-	100	64.394	Octodon_degus
ENSSBOG00000027830	-	67	53.378	ENSONIG00000005369	rbm7	62	48.876	Oreochromis_niloticus
ENSSBOG00000027830	-	100	69.818	ENSOANG00000001755	-	93	68.000	Ornithorhynchus_anatinus
ENSSBOG00000027830	-	100	88.764	ENSOCUG00000003342	-	100	87.640	Oryctolagus_cuniculus
ENSSBOG00000027830	-	72	52.830	ENSORLG00000028880	rbm7	98	41.852	Oryzias_latipes
ENSSBOG00000027830	-	72	52.201	ENSORLG00020010841	rbm7	61	49.708	Oryzias_latipes_hni
ENSSBOG00000027830	-	72	49.383	ENSORLG00015000536	rbm7	98	41.045	Oryzias_latipes_hsok
ENSSBOG00000027830	-	55	45.833	ENSOMEG00000000117	rbm7	58	41.333	Oryzias_melastigma
ENSSBOG00000027830	-	100	90.226	ENSOGAG00000016857	-	100	89.850	Otolemur_garnettii
ENSSBOG00000027830	-	100	86.891	ENSOARG00000000924	-	99	85.768	Ovis_aries
ENSSBOG00000027830	-	100	93.258	ENSPPAG00000027572	-	100	91.386	Pan_paniscus
ENSSBOG00000027830	-	100	85.393	ENSPPRG00000004372	-	100	84.270	Panthera_pardus
ENSSBOG00000027830	-	100	85.393	ENSPTIG00000013512	-	100	84.270	Panthera_tigris_altaica
ENSSBOG00000027830	-	100	93.258	ENSPTRG00000004305	RBM7	100	91.386	Pan_troglodytes
ENSSBOG00000027830	-	96	86.719	ENSPTRG00000049329	-	98	85.156	Pan_troglodytes
ENSSBOG00000027830	-	100	93.258	ENSPANG00000009431	-	100	91.386	Papio_anubis
ENSSBOG00000027830	-	98	50.566	ENSPKIG00000016648	rbm7	99	49.270	Paramormyrops_kingsleyae
ENSSBOG00000027830	-	70	47.682	ENSPMGG00000001523	rbm7	90	66.250	Periophthalmus_magnuspinnatus
ENSSBOG00000027830	-	99	75.472	ENSPEMG00000011553	-	100	74.340	Peromyscus_maniculatus_bairdii
ENSSBOG00000027830	-	97	75.373	ENSPCIG00000011225	-	84	75.000	Phascolarctos_cinereus
ENSSBOG00000027830	-	70	53.947	ENSPFOG00000002193	rbm7	54	52.980	Poecilia_formosa
ENSSBOG00000027830	-	70	53.289	ENSPLAG00000010517	rbm7	54	49.342	Poecilia_latipinna
ENSSBOG00000027830	-	97	39.416	ENSPMEG00000003603	rbm7	55	51.613	Poecilia_mexicana
ENSSBOG00000027830	-	97	40.441	ENSPREG00000015610	rbm7	54	53.642	Poecilia_reticulata
ENSSBOG00000027830	-	100	93.258	ENSPPYG00000003894	-	100	91.386	Pongo_abelii
ENSSBOG00000027830	-	88	68.776	ENSPCAG00000003270	-	100	66.245	Procavia_capensis
ENSSBOG00000027830	-	100	87.640	ENSPVAG00000005294	-	100	86.517	Pteropus_vampyrus
ENSSBOG00000027830	-	67	53.793	ENSPNYG00000012084	rbm7	52	53.793	Pundamilia_nyererei
ENSSBOG00000027830	-	98	43.706	ENSPNAG00000012813	rbm7	99	43.493	Pygocentrus_nattereri
ENSSBOG00000027830	-	100	94.382	ENSRBIG00000044762	-	100	92.509	Rhinopithecus_bieti
ENSSBOG00000027830	-	100	94.382	ENSRROG00000032280	-	100	92.509	Rhinopithecus_roxellana
ENSSBOG00000027830	-	100	76.087	ENSSHAG00000008426	-	100	75.362	Sarcophilus_harrisii
ENSSBOG00000027830	-	98	49.270	ENSSFOG00015008458	rbm7	99	47.761	Scleropages_formosus
ENSSBOG00000027830	-	98	40.727	ENSSMAG00000003040	rbm7	97	40.977	Scophthalmus_maximus
ENSSBOG00000027830	-	67	53.472	ENSSDUG00000005361	rbm7	61	49.112	Seriola_dumerili
ENSSBOG00000027830	-	67	53.472	ENSSLDG00000003221	rbm7	61	49.112	Seriola_lalandi_dorsalis
ENSSBOG00000027830	-	88	53.285	ENSSPUG00000006032	-	99	52.555	Sphenodon_punctatus
ENSSBOG00000027830	-	98	42.238	ENSSPAG00000019320	rbm7	68	73.256	Stegastes_partitus
ENSSBOG00000027830	-	100	85.768	ENSSSCG00000027905	-	100	83.895	Sus_scrofa
ENSSBOG00000027830	-	100	48.601	ENSTGUG00000000117	-	100	46.667	Taeniopygia_guttata
ENSSBOG00000027830	-	72	50.000	ENSTRUG00000020355	rbm7	57	50.000	Takifugu_rubripes
ENSSBOG00000027830	-	100	75.281	ENSTBEG00000008650	-	100	73.783	Tupaia_belangeri
ENSSBOG00000027830	-	100	86.891	ENSTTRG00000001515	-	100	86.142	Tursiops_truncatus
ENSSBOG00000027830	-	100	89.394	ENSUAMG00000019095	-	100	89.773	Ursus_americanus
ENSSBOG00000027830	-	100	89.394	ENSUMAG00000003774	-	100	89.773	Ursus_maritimus
ENSSBOG00000027830	-	100	88.764	ENSVPAG00000006300	-	100	88.015	Vicugna_pacos
ENSSBOG00000027830	-	95	54.924	ENSXETG00000012654	rbm7	99	53.409	Xenopus_tropicalis
ENSSBOG00000027830	-	95	40.299	ENSXMAG00000000970	rbm7	60	47.273	Xiphophorus_maculatus