EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000027927 (Gene tree)
Gene ID: 101029998
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 15547 bases
Position: chrJH378134.1:15721055-15736601
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000022822	RRM_1	PF00076.22	4.9e-18	1	1
ENSSBOP00000022811	RRM_1	PF00076.22	8.2e-18	1	1
ENSSBOP00000022808	RRM_1	PF00076.22	9.1e-18	1	1
ENSSBOP00000022815	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000039660	RNPS1-201	2842	XM_003928409	ENSSBOP00000022808	305 (aa)	XP_003928458	A0A2K6TTC1
ENSSBOT00000039663	RNPS1-202	2652	XM_003928410	ENSSBOP00000022811	282 (aa)	XP_003928459	A0A2K6TT17
ENSSBOT00000039674	RNPS1-204	636	-	ENSSBOP00000022822	211 (aa)	-	A0A2K6TT29
ENSSBOT00000039667	RNPS1-203	774	-	ENSSBOP00000022815	257 (aa)	-	A0A2K6TT21

Gene Model

Click here to download ENSSBOG00000027927's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG
sbq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000027927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000027927	RNPS1	100	100.000	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
ENSSBOG00000027927	RNPS1	78	69.038	ENSAPOG00000014649	-	85	70.124	Acanthochromis_polyacanthus
ENSSBOG00000027927	RNPS1	100	100.000	ENSAMEG00000017861	RNPS1	100	100.000	Ailuropoda_melanoleuca
ENSSBOG00000027927	RNPS1	76	67.907	ENSACIG00000014367	-	76	66.512	Amphilophus_citrinellus
ENSSBOG00000027927	RNPS1	85	70.417	ENSAOCG00000002404	RNPS1	84	70.417	Amphiprion_ocellaris
ENSSBOG00000027927	RNPS1	85	70.293	ENSAPEG00000006497	RNPS1	81	70.293	Amphiprion_percula
ENSSBOG00000027927	RNPS1	78	65.174	ENSAPEG00000019263	-	81	69.136	Amphiprion_percula
ENSSBOG00000027927	RNPS1	85	72.083	ENSATEG00000024267	RNPS1	84	72.614	Anabas_testudineus
ENSSBOG00000027927	RNPS1	59	93.548	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
ENSSBOG00000027927	RNPS1	78	93.532	ENSACAG00000004088	RNPS1	94	90.987	Anolis_carolinensis
ENSSBOG00000027927	RNPS1	87	89.732	ENSANAG00000029802	-	90	92.887	Aotus_nancymaae
ENSSBOG00000027927	RNPS1	100	100.000	ENSANAG00000028802	RNPS1	100	100.000	Aotus_nancymaae
ENSSBOG00000027927	RNPS1	85	64.583	ENSACLG00000021537	-	96	68.302	Astatotilapia_calliptera
ENSSBOG00000027927	RNPS1	85	75.417	ENSAMXG00000006330	-	84	68.750	Astyanax_mexicanus
ENSSBOG00000027927	RNPS1	55	80.342	ENSAMXG00000037447	RNPS1	75	68.980	Astyanax_mexicanus
ENSSBOG00000027927	RNPS1	100	99.344	ENSBTAG00000009969	RNPS1	100	99.344	Bos_taurus
ENSSBOG00000027927	RNPS1	100	100.000	ENSCJAG00000014969	RNPS1	100	100.000	Callithrix_jacchus
ENSSBOG00000027927	RNPS1	100	100.000	ENSCAFG00000019397	RNPS1	100	100.000	Canis_familiaris
ENSSBOG00000027927	RNPS1	100	100.000	ENSCAFG00020026159	RNPS1	100	100.000	Canis_lupus_dingo
ENSSBOG00000027927	RNPS1	81	97.129	ENSCHIG00000014621	-	70	98.068	Capra_hircus
ENSSBOG00000027927	RNPS1	79	95.455	ENSTSYG00000031848	-	98	95.417	Carlito_syrichta
ENSSBOG00000027927	RNPS1	100	100.000	ENSTSYG00000001629	RNPS1	100	100.000	Carlito_syrichta
ENSSBOG00000027927	RNPS1	100	99.672	ENSCAPG00000007731	RNPS1	100	99.672	Cavia_aperea
ENSSBOG00000027927	RNPS1	100	99.672	ENSCPOG00000002066	RNPS1	100	99.672	Cavia_porcellus
ENSSBOG00000027927	RNPS1	100	99.672	ENSCCAG00000034480	RNPS1	100	99.672	Cebus_capucinus
ENSSBOG00000027927	RNPS1	100	100.000	ENSCATG00000013756	RNPS1	100	100.000	Cercocebus_atys
ENSSBOG00000027927	RNPS1	95	90.034	ENSCATG00000042361	-	100	84.942	Cercocebus_atys
ENSSBOG00000027927	RNPS1	100	99.672	ENSCLAG00000015546	RNPS1	100	99.672	Chinchilla_lanigera
ENSSBOG00000027927	RNPS1	100	97.163	ENSCSAG00000005219	-	95	97.163	Chlorocebus_sabaeus
ENSSBOG00000027927	RNPS1	100	98.361	ENSCHOG00000004866	RNPS1	100	98.361	Choloepus_hoffmanni
ENSSBOG00000027927	RNPS1	80	69.951	ENSCPBG00000000214	RNPS1	95	69.849	Chrysemys_picta_bellii
ENSSBOG00000027927	RNPS1	100	81.749	ENSCANG00000030189	-	99	69.202	Colobus_angolensis_palliatus
ENSSBOG00000027927	RNPS1	100	100.000	ENSCANG00000041307	RNPS1	100	100.000	Colobus_angolensis_palliatus
ENSSBOG00000027927	RNPS1	100	100.000	ENSCGRG00001020431	Rnps1	100	100.000	Cricetulus_griseus_chok1gshd
ENSSBOG00000027927	RNPS1	54	80.531	ENSCGRG00001010012	-	51	86.792	Cricetulus_griseus_chok1gshd
ENSSBOG00000027927	RNPS1	100	99.344	ENSCGRG00000014021	Rnps1	100	99.344	Cricetulus_griseus_crigri
ENSSBOG00000027927	RNPS1	60	96.850	ENSCGRG00000010104	-	100	96.850	Cricetulus_griseus_crigri
ENSSBOG00000027927	RNPS1	54	80.531	ENSCGRG00000018236	-	51	86.792	Cricetulus_griseus_crigri
ENSSBOG00000027927	RNPS1	85	69.874	ENSCSEG00000015997	RNPS1	82	69.874	Cynoglossus_semilaevis
ENSSBOG00000027927	RNPS1	85	71.250	ENSCSEG00000000402	RNPS1	85	68.702	Cynoglossus_semilaevis
ENSSBOG00000027927	RNPS1	77	70.968	ENSCVAG00000010868	RNPS1	75	64.815	Cyprinodon_variegatus
ENSSBOG00000027927	RNPS1	85	63.750	ENSDARG00000116743	rnps1	84	69.710	Danio_rerio
ENSSBOG00000027927	RNPS1	85	63.750	ENSDARG00000100188	RNPS1	84	69.710	Danio_rerio
ENSSBOG00000027927	RNPS1	76	73.469	ENSDNOG00000038751	-	99	72.727	Dasypus_novemcinctus
ENSSBOG00000027927	RNPS1	100	100.000	ENSDNOG00000016081	RNPS1	100	100.000	Dasypus_novemcinctus
ENSSBOG00000027927	RNPS1	100	99.344	ENSDORG00000001755	Rnps1	100	99.344	Dipodomys_ordii
ENSSBOG00000027927	RNPS1	100	100.000	ENSEASG00005004862	RNPS1	100	100.000	Equus_asinus_asinus
ENSSBOG00000027927	RNPS1	80	98.537	ENSECAG00000023288	RNPS1	83	98.268	Equus_caballus
ENSSBOG00000027927	RNPS1	100	80.984	ENSEEUG00000005933	RNPS1	100	80.984	Erinaceus_europaeus
ENSSBOG00000027927	RNPS1	100	100.000	ENSFCAG00000007690	RNPS1	100	100.000	Felis_catus
ENSSBOG00000027927	RNPS1	85	95.397	ENSFALG00000004868	RNPS1	85	95.417	Ficedula_albicollis
ENSSBOG00000027927	RNPS1	100	99.344	ENSFDAG00000003386	RNPS1	100	99.344	Fukomys_damarensis
ENSSBOG00000027927	RNPS1	79	70.443	ENSFHEG00000011705	RNPS1	75	71.429	Fundulus_heteroclitus
ENSSBOG00000027927	RNPS1	85	95.417	ENSGALG00000009288	RNPS1	85	95.417	Gallus_gallus
ENSSBOG00000027927	RNPS1	85	68.465	ENSGACG00000005641	-	84	68.465	Gasterosteus_aculeatus
ENSSBOG00000027927	RNPS1	86	93.156	ENSGAGG00000010452	RNPS1	86	93.156	Gopherus_agassizii
ENSSBOG00000027927	RNPS1	100	92.337	ENSGGOG00000026421	-	100	92.337	Gorilla_gorilla
ENSSBOG00000027927	RNPS1	100	100.000	ENSGGOG00000014275	RNPS1	100	100.000	Gorilla_gorilla
ENSSBOG00000027927	RNPS1	79	64.730	ENSHBUG00000017337	-	84	72.199	Haplochromis_burtoni
ENSSBOG00000027927	RNPS1	100	84.436	ENSHGLG00000006292	-	97	95.142	Heterocephalus_glaber_female
ENSSBOG00000027927	RNPS1	100	100.000	ENSHGLG00000013957	RNPS1	100	100.000	Heterocephalus_glaber_female
ENSSBOG00000027927	RNPS1	86	92.015	ENSHGLG00100001721	-	64	88.557	Heterocephalus_glaber_male
ENSSBOG00000027927	RNPS1	80	83.265	ENSHGLG00100017879	-	80	70.248	Heterocephalus_glaber_male
ENSSBOG00000027927	RNPS1	100	82.946	ENSHGLG00100011610	-	100	83.333	Heterocephalus_glaber_male
ENSSBOG00000027927	RNPS1	80	90.533	ENSHGLG00100010622	-	74	91.589	Heterocephalus_glaber_male
ENSSBOG00000027927	RNPS1	92	94.231	ENSHGLG00100015267	-	80	95.495	Heterocephalus_glaber_male
ENSSBOG00000027927	RNPS1	100	100.000	ENSHGLG00100003539	RNPS1	100	100.000	Heterocephalus_glaber_male
ENSSBOG00000027927	RNPS1	55	81.197	ENSIPUG00000011746	rnps1	93	78.423	Ictalurus_punctatus
ENSSBOG00000027927	RNPS1	99	85.053	ENSSTOG00000013200	RNPS1	100	88.197	Ictidomys_tridecemlineatus
ENSSBOG00000027927	RNPS1	100	99.672	ENSJJAG00000015576	-	100	99.672	Jaculus_jaculus
ENSSBOG00000027927	RNPS1	86	82.129	ENSJJAG00000019234	-	68	79.498	Jaculus_jaculus
ENSSBOG00000027927	RNPS1	63	94.737	ENSJJAG00000000532	-	60	95.968	Jaculus_jaculus
ENSSBOG00000027927	RNPS1	85	71.784	ENSKMAG00000009135	RNPS1	84	67.220	Kryptolebias_marmoratus
ENSSBOG00000027927	RNPS1	55	85.470	ENSLBEG00000015904	-	59	83.871	Labrus_bergylta
ENSSBOG00000027927	RNPS1	52	75.455	ENSLBEG00000024091	RNPS1	75	64.651	Labrus_bergylta
ENSSBOG00000027927	RNPS1	85	87.917	ENSLACG00000007112	RNPS1	85	87.917	Latimeria_chalumnae
ENSSBOG00000027927	RNPS1	85	67.500	ENSLOCG00000001758	RNPS1	84	83.333	Lepisosteus_oculatus
ENSSBOG00000027927	RNPS1	93	100.000	ENSLAFG00000000728	RNPS1	50	100.000	Loxodonta_africana
ENSSBOG00000027927	RNPS1	86	89.734	ENSMFAG00000044121	-	83	83.265	Macaca_fascicularis
ENSSBOG00000027927	RNPS1	100	100.000	ENSMFAG00000042142	RNPS1	100	100.000	Macaca_fascicularis
ENSSBOG00000027927	RNPS1	88	94.776	ENSMMUG00000041726	-	92	94.677	Macaca_mulatta
ENSSBOG00000027927	RNPS1	100	100.000	ENSMMUG00000019238	-	100	100.000	Macaca_mulatta
ENSSBOG00000027927	RNPS1	88	95.149	ENSMNEG00000024827	-	92	95.057	Macaca_nemestrina
ENSSBOG00000027927	RNPS1	100	87.938	ENSMLEG00000040232	-	100	87.938	Mandrillus_leucophaeus
ENSSBOG00000027927	RNPS1	100	100.000	ENSMLEG00000036928	RNPS1	100	100.000	Mandrillus_leucophaeus
ENSSBOG00000027927	RNPS1	91	65.401	ENSMAMG00000021609	-	84	70.539	Mastacembelus_armatus
ENSSBOG00000027927	RNPS1	85	74.583	ENSMAMG00000021148	-	88	68.199	Mastacembelus_armatus
ENSSBOG00000027927	RNPS1	85	64.730	ENSMZEG00005006256	-	85	72.199	Maylandia_zebra
ENSSBOG00000027927	RNPS1	78	95.025	ENSMGAG00000010042	RNPS1	98	94.492	Meleagris_gallopavo
ENSSBOG00000027927	RNPS1	61	100.000	ENSMAUG00000004017	-	100	100.000	Mesocricetus_auratus
ENSSBOG00000027927	RNPS1	100	99.526	ENSMICG00000031543	RNPS1	100	99.526	Microcebus_murinus
ENSSBOG00000027927	RNPS1	100	100.000	ENSMOCG00000003429	Rnps1	100	100.000	Microtus_ochrogaster
ENSSBOG00000027927	RNPS1	78	65.174	ENSMMOG00000010863	RNPS1	75	65.116	Mola_mola
ENSSBOG00000027927	RNPS1	100	97.712	ENSMODG00000015891	RNPS1	100	97.712	Monodelphis_domestica
ENSSBOG00000027927	RNPS1	100	100.000	ENSMUSG00000034681	Rnps1	100	100.000	Mus_musculus
ENSSBOG00000027927	RNPS1	100	100.000	MGP_PahariEiJ_G0023498	Rnps1	100	100.000	Mus_pahari
ENSSBOG00000027927	RNPS1	100	100.000	MGP_SPRETEiJ_G0022092	Rnps1	100	100.000	Mus_spretus
ENSSBOG00000027927	RNPS1	100	100.000	ENSMLUG00000016808	RNPS1	100	100.000	Myotis_lucifugus
ENSSBOG00000027927	RNPS1	100	100.000	ENSNGAG00000023702	Rnps1	100	100.000	Nannospalax_galili
ENSSBOG00000027927	RNPS1	81	63.563	ENSNBRG00000014540	-	92	68.750	Neolamprologus_brichardi
ENSSBOG00000027927	RNPS1	78	66.667	ENSNBRG00000023437	RNPS1	75	66.512	Neolamprologus_brichardi
ENSSBOG00000027927	RNPS1	89	98.162	ENSNLEG00000009243	RNPS1	100	98.162	Nomascus_leucogenys
ENSSBOG00000027927	RNPS1	100	96.721	ENSMEUG00000008882	RNPS1	100	96.721	Notamacropus_eugenii
ENSSBOG00000027927	RNPS1	100	96.721	ENSOPRG00000016422	RNPS1	100	96.721	Ochotona_princeps
ENSSBOG00000027927	RNPS1	60	73.228	ENSODEG00000003850	-	55	90.476	Octodon_degus
ENSSBOG00000027927	RNPS1	93	67.005	ENSODEG00000002513	-	79	68.047	Octodon_degus
ENSSBOG00000027927	RNPS1	92	68.718	ENSODEG00000017258	-	77	68.047	Octodon_degus
ENSSBOG00000027927	RNPS1	79	60.099	ENSONIG00000019627	-	85	71.784	Oreochromis_niloticus
ENSSBOG00000027927	RNPS1	85	70.000	ENSORLG00015011183	RNPS1	74	71.369	Oryzias_latipes_hsok
ENSSBOG00000027927	RNPS1	62	100.000	ENSOGAG00000031582	-	99	100.000	Otolemur_garnettii
ENSSBOG00000027927	RNPS1	95	99.310	ENSOARG00000018056	-	81	99.310	Ovis_aries
ENSSBOG00000027927	RNPS1	100	93.443	ENSPPAG00000011845	RNPS1	100	93.443	Pan_paniscus
ENSSBOG00000027927	RNPS1	78	99.502	ENSPPAG00000037836	-	99	94.215	Pan_paniscus
ENSSBOG00000027927	RNPS1	100	100.000	ENSPPRG00000011255	RNPS1	100	100.000	Panthera_pardus
ENSSBOG00000027927	RNPS1	80	90.533	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
ENSSBOG00000027927	RNPS1	100	100.000	ENSPTRG00000031310	RNPS1	100	100.000	Pan_troglodytes
ENSSBOG00000027927	RNPS1	100	93.385	ENSPTRG00000046326	-	100	93.385	Pan_troglodytes
ENSSBOG00000027927	RNPS1	100	100.000	ENSPANG00000015748	RNPS1	100	100.000	Papio_anubis
ENSSBOG00000027927	RNPS1	100	71.984	ENSPANG00000033576	-	100	71.984	Papio_anubis
ENSSBOG00000027927	RNPS1	85	80.083	ENSPKIG00000023465	RNPS1	85	80.083	Paramormyrops_kingsleyae
ENSSBOG00000027927	RNPS1	85	94.142	ENSPSIG00000006048	RNPS1	86	92.776	Pelodiscus_sinensis
ENSSBOG00000027927	RNPS1	52	78.182	ENSPMGG00000015888	-	75	66.204	Periophthalmus_magnuspinnatus
ENSSBOG00000027927	RNPS1	100	100.000	ENSPEMG00000012797	Rnps1	100	100.000	Peromyscus_maniculatus_bairdii
ENSSBOG00000027927	RNPS1	100	98.227	ENSPCIG00000025012	RNPS1	100	98.227	Phascolarctos_cinereus
ENSSBOG00000027927	RNPS1	80	91.124	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
ENSSBOG00000027927	RNPS1	79	66.502	ENSPFOG00000009978	RNPS1	75	63.889	Poecilia_formosa
ENSSBOG00000027927	RNPS1	79	66.502	ENSPLAG00000009343	RNPS1	75	63.889	Poecilia_latipinna
ENSSBOG00000027927	RNPS1	79	66.502	ENSPMEG00000008552	RNPS1	75	63.889	Poecilia_mexicana
ENSSBOG00000027927	RNPS1	79	66.502	ENSPREG00000001843	RNPS1	75	63.889	Poecilia_reticulata
ENSSBOG00000027927	RNPS1	100	97.705	ENSPCAG00000004514	RNPS1	100	97.705	Procavia_capensis
ENSSBOG00000027927	RNPS1	100	100.000	ENSPCOG00000005478	RNPS1	100	100.000	Propithecus_coquereli
ENSSBOG00000027927	RNPS1	100	99.672	ENSPVAG00000005105	RNPS1	100	99.672	Pteropus_vampyrus
ENSSBOG00000027927	RNPS1	85	76.250	ENSPNAG00000025479	RNPS1	84	69.583	Pygocentrus_nattereri
ENSSBOG00000027927	RNPS1	55	83.761	ENSPNAG00000017784	-	85	77.366	Pygocentrus_nattereri
ENSSBOG00000027927	RNPS1	100	99.672	ENSRNOG00000008703	Rnps1	100	99.672	Rattus_norvegicus
ENSSBOG00000027927	RNPS1	85	86.873	ENSRNOG00000027239	AABR07037800.1	65	84.577	Rattus_norvegicus
ENSSBOG00000027927	RNPS1	99	99.288	ENSRBIG00000038965	-	99	99.288	Rhinopithecus_bieti
ENSSBOG00000027927	RNPS1	62	82.443	ENSRBIG00000013248	-	64	82.258	Rhinopithecus_bieti
ENSSBOG00000027927	RNPS1	89	100.000	ENSRROG00000041252	RNPS1	97	96.639	Rhinopithecus_roxellana
ENSSBOG00000027927	RNPS1	100	98.033	ENSSHAG00000016951	RNPS1	100	98.033	Sarcophilus_harrisii
ENSSBOG00000027927	RNPS1	85	73.444	ENSSFOG00015022746	RNPS1	87	67.500	Scleropages_formosus
ENSSBOG00000027927	RNPS1	85	76.987	ENSSFOG00015019341	-	75	69.295	Scleropages_formosus
ENSSBOG00000027927	RNPS1	61	78.906	ENSSMAG00000005367	-	72	81.452	Scophthalmus_maximus
ENSSBOG00000027927	RNPS1	78	66.337	ENSSDUG00000006433	-	85	67.939	Seriola_dumerili
ENSSBOG00000027927	RNPS1	85	70.833	ENSSDUG00000011453	RNPS1	84	71.369	Seriola_dumerili
ENSSBOG00000027927	RNPS1	87	65.198	ENSSLDG00000021341	RNPS1	76	67.647	Seriola_lalandi_dorsalis
ENSSBOG00000027927	RNPS1	79	97.107	ENSSARG00000001577	RNPS1	86	97.107	Sorex_araneus
ENSSBOG00000027927	RNPS1	86	93.536	ENSSPUG00000016588	RNPS1	86	93.536	Sphenodon_punctatus
ENSSBOG00000027927	RNPS1	58	79.032	ENSSPAG00000009383	RNPS1	84	71.784	Stegastes_partitus
ENSSBOG00000027927	RNPS1	100	99.672	ENSSSCG00000008048	RNPS1	100	99.672	Sus_scrofa
ENSSBOG00000027927	RNPS1	85	94.979	ENSTGUG00000003237	RNPS1	85	95.000	Taeniopygia_guttata
ENSSBOG00000027927	RNPS1	85	71.784	ENSTRUG00000008602	RNPS1	84	71.784	Takifugu_rubripes
ENSSBOG00000027927	RNPS1	85	72.083	ENSTNIG00000009753	RNPS1	84	72.016	Tetraodon_nigroviridis
ENSSBOG00000027927	RNPS1	89	100.000	ENSTBEG00000009098	RNPS1	100	100.000	Tupaia_belangeri
ENSSBOG00000027927	RNPS1	100	100.000	ENSTTRG00000008220	RNPS1	100	100.000	Tursiops_truncatus
ENSSBOG00000027927	RNPS1	90	100.000	ENSUAMG00000004462	RNPS1	100	100.000	Ursus_americanus
ENSSBOG00000027927	RNPS1	100	100.000	ENSUMAG00000022327	RNPS1	100	100.000	Ursus_maritimus
ENSSBOG00000027927	RNPS1	100	100.000	ENSVVUG00000009244	RNPS1	100	100.000	Vulpes_vulpes
ENSSBOG00000027927	RNPS1	81	72.174	ENSXETG00000024439	rnps1	73	72.124	Xenopus_tropicalis
ENSSBOG00000027927	RNPS1	85	67.635	ENSXMAG00000004827	RNPS1	84	64.167	Xiphophorus_maculatus