EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000028071 (Gene tree)
Gene ID: 101049000
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 7216 bases
Position: chrJH378106.1:28232997-28240212
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000023113	SRP19	PF01922.17	8.1e-29	1	1
ENSSBOP00000023134	SRP19	PF01922.17	1.1e-25	1	1
ENSSBOP00000023121	SRP19	PF01922.17	2.2e-14	1	2
ENSSBOP00000023121	SRP19	PF01922.17	2.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000039985	-	237	-	ENSSBOP00000023131	78 (aa)	-	A0A2K6TTZ9
ENSSBOT00000039975	-	363	-	ENSSBOP00000023121	120 (aa)	-	A0A2K6TTY7
ENSSBOT00000039967	-	933	XM_003920695	ENSSBOP00000023113	144 (aa)	XP_003920744	A0A2K6TU69
ENSSBOT00000039988	-	333	-	ENSSBOP00000023134	110 (aa)	-	A0A2K6TU01

Gene Model

Click here to download ENSSBOG00000028071's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000028071	-	94	71.852	ENSSBOG00000032685	-	89	79.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028071	-	100	99.091	ENSG00000153037	SRP19	100	100.000	Homo_sapiens
ENSSBOG00000028071	-	90	69.767	ENSAPOG00000002199	srp19	90	69.767	Acanthochromis_polyacanthus
ENSSBOG00000028071	-	100	97.917	ENSAMEG00000012623	SRP19	99	97.917	Ailuropoda_melanoleuca
ENSSBOG00000028071	-	90	68.217	ENSACIG00000005082	srp19	89	68.750	Amphilophus_citrinellus
ENSSBOG00000028071	-	90	68.992	ENSAOCG00000002718	srp19	91	68.992	Amphiprion_ocellaris
ENSSBOG00000028071	-	90	68.992	ENSAPEG00000022170	srp19	91	68.992	Amphiprion_percula
ENSSBOG00000028071	-	90	71.318	ENSATEG00000012472	srp19	91	71.318	Anabas_testudineus
ENSSBOG00000028071	-	78	85.841	ENSAPLG00000002624	SRP19	93	85.217	Anas_platyrhynchos
ENSSBOG00000028071	-	92	79.699	ENSACAG00000007550	SRP19	92	79.851	Anolis_carolinensis
ENSSBOG00000028071	-	100	100.000	ENSANAG00000032576	-	100	100.000	Aotus_nancymaae
ENSSBOG00000028071	-	90	76.923	ENSANAG00000029862	-	89	89.691	Aotus_nancymaae
ENSSBOG00000028071	-	95	75.182	ENSANAG00000030287	-	97	75.758	Aotus_nancymaae
ENSSBOG00000028071	-	89	67.188	ENSACLG00000006259	srp19	90	67.188	Astatotilapia_calliptera
ENSSBOG00000028071	-	89	68.750	ENSAMXG00000043011	srp19	90	69.531	Astyanax_mexicanus
ENSSBOG00000028071	-	100	97.917	ENSBTAG00000012803	SRP19	100	97.917	Bos_taurus
ENSSBOG00000028071	-	84	51.087	WBGene00018159	F37F2.2	82	50.000	Caenorhabditis_elegans
ENSSBOG00000028071	-	91	74.809	ENSCJAG00000045531	-	85	74.436	Callithrix_jacchus
ENSSBOG00000028071	-	100	99.167	ENSCJAG00000038676	-	100	99.167	Callithrix_jacchus
ENSSBOG00000028071	-	100	98.611	ENSCAFG00000031549	SRP19	100	98.611	Canis_familiaris
ENSSBOG00000028071	-	100	98.611	ENSCAFG00020014267	-	100	98.611	Canis_lupus_dingo
ENSSBOG00000028071	-	72	95.192	ENSCAFG00020004285	-	93	95.192	Canis_lupus_dingo
ENSSBOG00000028071	-	92	99.242	ENSCAFG00020022437	-	99	99.242	Canis_lupus_dingo
ENSSBOG00000028071	-	100	97.917	ENSCHIG00000017551	SRP19	100	97.917	Capra_hircus
ENSSBOG00000028071	-	100	99.306	ENSTSYG00000007875	SRP19	100	99.306	Carlito_syrichta
ENSSBOG00000028071	-	92	96.040	ENSCPOG00000036806	SRP19	83	89.189	Cavia_porcellus
ENSSBOG00000028071	-	92	74.242	ENSCCAG00000029821	-	66	74.242	Cebus_capucinus
ENSSBOG00000028071	-	96	77.358	ENSCCAG00000023426	-	87	78.947	Cebus_capucinus
ENSSBOG00000028071	-	100	100.000	ENSCCAG00000035651	-	100	100.000	Cebus_capucinus
ENSSBOG00000028071	-	94	90.370	ENSCATG00000039250	-	93	90.370	Cercocebus_atys
ENSSBOG00000028071	-	88	83.465	ENSCATG00000040513	-	80	83.077	Cercocebus_atys
ENSSBOG00000028071	-	100	97.500	ENSCLAG00000004791	-	100	97.500	Chinchilla_lanigera
ENSSBOG00000028071	-	94	89.630	ENSCLAG00000016055	-	93	89.630	Chinchilla_lanigera
ENSSBOG00000028071	-	100	97.222	ENSCHOG00000013452	SRP19	100	97.222	Choloepus_hoffmanni
ENSSBOG00000028071	-	90	80.620	ENSCPBG00000013903	SRP19	91	80.769	Chrysemys_picta_bellii
ENSSBOG00000028071	-	100	96.667	ENSCGRG00001020510	Srp19	100	96.667	Cricetulus_griseus_chok1gshd
ENSSBOG00000028071	-	83	86.667	ENSCGRG00000008542	-	92	86.667	Cricetulus_griseus_crigri
ENSSBOG00000028071	-	67	90.099	ENSCGRG00000010716	-	89	90.099	Cricetulus_griseus_crigri
ENSSBOG00000028071	-	89	68.750	ENSCSEG00000010039	srp19	90	68.750	Cynoglossus_semilaevis
ENSSBOG00000028071	-	88	71.654	ENSCVAG00000017621	srp19	89	71.654	Cyprinodon_variegatus
ENSSBOG00000028071	-	88	71.429	ENSDARG00000035699	srp19	89	71.654	Danio_rerio
ENSSBOG00000028071	-	94	95.556	ENSDNOG00000013856	SRP19	94	95.556	Dasypus_novemcinctus
ENSSBOG00000028071	-	74	99.057	ENSDORG00000004746	Srp19	83	99.057	Dipodomys_ordii
ENSSBOG00000028071	-	91	49.000	FBgn0015298	Srp19	70	53.097	Drosophila_melanogaster
ENSSBOG00000028071	-	94	92.593	ENSETEG00000017132	SRP19	94	92.593	Echinops_telfairi
ENSSBOG00000028071	-	83	64.835	ENSEBUG00000006613	srp19	87	63.710	Eptatretus_burgeri
ENSSBOG00000028071	-	100	97.222	ENSEASG00005015182	SRP19	100	97.222	Equus_asinus_asinus
ENSSBOG00000028071	-	100	97.917	ENSEEUG00000007298	SRP19	100	97.917	Erinaceus_europaeus
ENSSBOG00000028071	-	90	67.442	ENSELUG00000004594	srp19	91	67.442	Esox_lucius
ENSSBOG00000028071	-	89	71.094	ENSELUG00000007958	srp19	91	71.318	Esox_lucius
ENSSBOG00000028071	-	100	99.306	ENSFCAG00000025895	SRP19	100	99.306	Felis_catus
ENSSBOG00000028071	-	100	96.667	ENSFDAG00000013543	SRP19	100	96.667	Fukomys_damarensis
ENSSBOG00000028071	-	85	68.817	ENSFHEG00000000493	srp19	89	70.866	Fundulus_heteroclitus
ENSSBOG00000028071	-	83	72.500	ENSGMOG00000003264	srp19	93	72.500	Gadus_morhua
ENSSBOG00000028071	-	92	84.962	ENSGALG00000000218	SRP19	93	85.075	Gallus_gallus
ENSSBOG00000028071	-	88	69.291	ENSGAFG00000015815	srp19	60	70.400	Gambusia_affinis
ENSSBOG00000028071	-	88	71.654	ENSGACG00000001093	srp19	85	71.654	Gasterosteus_aculeatus
ENSSBOG00000028071	-	96	77.358	ENSGAGG00000025305	SRP19	94	80.741	Gopherus_agassizii
ENSSBOG00000028071	-	90	67.692	ENSHBUG00000006131	srp19	90	67.692	Haplochromis_burtoni
ENSSBOG00000028071	-	100	97.500	ENSHGLG00000006075	SRP19	100	97.500	Heterocephalus_glaber_female
ENSSBOG00000028071	-	100	97.500	ENSHGLG00100015859	SRP19	100	97.500	Heterocephalus_glaber_male
ENSSBOG00000028071	-	89	67.188	ENSHCOG00000013231	srp19	90	67.188	Hippocampus_comes
ENSSBOG00000028071	-	90	68.468	ENSIPUG00000025084	srp19	92	68.750	Ictalurus_punctatus
ENSSBOG00000028071	-	100	98.333	ENSSTOG00000000348	SRP19	100	98.333	Ictidomys_tridecemlineatus
ENSSBOG00000028071	-	100	97.917	ENSJJAG00000017185	Srp19	100	97.917	Jaculus_jaculus
ENSSBOG00000028071	-	91	70.229	ENSKMAG00000011155	srp19	92	70.229	Kryptolebias_marmoratus
ENSSBOG00000028071	-	88	70.866	ENSLBEG00000026727	srp19	89	70.866	Labrus_bergylta
ENSSBOG00000028071	-	88	82.540	ENSLACG00000004459	SRP19	82	82.677	Latimeria_chalumnae
ENSSBOG00000028071	-	89	74.219	ENSLOCG00000010302	srp19	91	74.419	Lepisosteus_oculatus
ENSSBOG00000028071	-	100	96.528	ENSLAFG00000002564	SRP19	100	96.528	Loxodonta_africana
ENSSBOG00000028071	-	96	87.736	ENSMFAG00000000554	-	93	88.148	Macaca_fascicularis
ENSSBOG00000028071	-	83	74.790	ENSMFAG00000040055	-	90	75.207	Macaca_fascicularis
ENSSBOG00000028071	-	85	83.740	ENSMMUG00000032515	-	92	84.000	Macaca_mulatta
ENSSBOG00000028071	-	96	87.736	ENSMMUG00000049186	-	93	88.148	Macaca_mulatta
ENSSBOG00000028071	-	83	73.950	ENSMNEG00000040117	-	90	74.380	Macaca_nemestrina
ENSSBOG00000028071	-	100	99.091	ENSMNEG00000038714	SRP19	100	99.091	Macaca_nemestrina
ENSSBOG00000028071	-	90	70.543	ENSMAMG00000018346	srp19	90	70.543	Mastacembelus_armatus
ENSSBOG00000028071	-	90	67.692	ENSMZEG00005001765	srp19	90	67.692	Maylandia_zebra
ENSSBOG00000028071	-	83	85.833	ENSMGAG00000006762	SRP19	93	85.246	Meleagris_gallopavo
ENSSBOG00000028071	-	67	88.660	ENSMICG00000049202	-	91	89.109	Microcebus_murinus
ENSSBOG00000028071	-	100	97.273	ENSMICG00000000399	SRP19	100	97.273	Microcebus_murinus
ENSSBOG00000028071	-	100	97.500	ENSMOCG00000006534	Srp19	100	97.500	Microtus_ochrogaster
ENSSBOG00000028071	-	74	96.226	ENSMOCG00000010532	-	97	96.226	Microtus_ochrogaster
ENSSBOG00000028071	-	92	69.925	ENSMMOG00000010417	srp19	86	69.925	Mola_mola
ENSSBOG00000028071	-	90	93.023	ENSMODG00000013278	SRP19	91	93.077	Monodelphis_domestica
ENSSBOG00000028071	-	88	73.228	ENSMALG00000003858	srp19	89	73.228	Monopterus_albus
ENSSBOG00000028071	-	100	96.667	MGP_CAROLIEiJ_G0022086	Srp19	98	100.000	Mus_caroli
ENSSBOG00000028071	-	100	96.667	ENSMUSG00000014504	Srp19	98	100.000	Mus_musculus
ENSSBOG00000028071	-	100	96.667	MGP_PahariEiJ_G0018820	Srp19	100	96.667	Mus_pahari
ENSSBOG00000028071	-	100	96.667	MGP_SPRETEiJ_G0022998	Srp19	98	100.000	Mus_spretus
ENSSBOG00000028071	-	100	98.611	ENSMPUG00000012695	SRP19	99	98.611	Mustela_putorius_furo
ENSSBOG00000028071	-	88	89.691	ENSMLUG00000024549	-	90	91.200	Myotis_lucifugus
ENSSBOG00000028071	-	94	96.296	ENSMLUG00000014793	-	94	96.296	Myotis_lucifugus
ENSSBOG00000028071	-	91	89.000	ENSNGAG00000014524	-	100	88.462	Nannospalax_galili
ENSSBOG00000028071	-	100	97.500	ENSNGAG00000003440	-	100	97.500	Nannospalax_galili
ENSSBOG00000028071	-	94	83.704	ENSNLEG00000035364	-	94	83.704	Nomascus_leucogenys
ENSSBOG00000028071	-	83	94.958	ENSMEUG00000012529	SRP19	93	94.215	Notamacropus_eugenii
ENSSBOG00000028071	-	81	95.726	ENSOPRG00000010549	SRP19	93	94.215	Ochotona_princeps
ENSSBOG00000028071	-	91	77.863	ENSODEG00000013862	-	94	78.519	Octodon_degus
ENSSBOG00000028071	-	67	93.814	ENSODEG00000005538	-	85	93.814	Octodon_degus
ENSSBOG00000028071	-	91	92.000	ENSODEG00000019119	-	94	91.111	Octodon_degus
ENSSBOG00000028071	-	90	66.667	ENSONIG00000000542	srp19	91	66.667	Oreochromis_niloticus
ENSSBOG00000028071	-	88	84.127	ENSOANG00000011139	SRP19	73	84.252	Ornithorhynchus_anatinus
ENSSBOG00000028071	-	94	94.118	ENSOCUG00000015639	SRP19	94	94.118	Oryctolagus_cuniculus
ENSSBOG00000028071	-	90	69.767	ENSORLG00000028267	srp19	91	69.767	Oryzias_latipes
ENSSBOG00000028071	-	90	69.767	ENSORLG00020015201	srp19	91	69.767	Oryzias_latipes_hni
ENSSBOG00000028071	-	90	69.767	ENSORLG00015007525	srp19	91	69.767	Oryzias_latipes_hsok
ENSSBOG00000028071	-	90	71.318	ENSOMEG00000009178	srp19	91	71.318	Oryzias_melastigma
ENSSBOG00000028071	-	100	97.222	ENSOGAG00000008579	SRP19	100	97.222	Otolemur_garnettii
ENSSBOG00000028071	-	100	97.222	ENSOARG00000016066	SRP19	100	97.222	Ovis_aries
ENSSBOG00000028071	-	100	98.611	ENSPPAG00000037062	SRP19	100	98.611	Pan_paniscus
ENSSBOG00000028071	-	100	99.306	ENSPPRG00000015591	SRP19	100	99.306	Panthera_pardus
ENSSBOG00000028071	-	100	99.306	ENSPTIG00000021474	SRP19	100	99.306	Panthera_tigris_altaica
ENSSBOG00000028071	-	100	98.611	ENSPTRG00000017136	SRP19	100	98.611	Pan_troglodytes
ENSSBOG00000028071	-	94	89.630	ENSPANG00000034740	-	93	89.630	Papio_anubis
ENSSBOG00000028071	-	100	99.091	ENSPANG00000004370	-	100	99.091	Papio_anubis
ENSSBOG00000028071	-	90	68.992	ENSPKIG00000018671	srp19	91	68.992	Paramormyrops_kingsleyae
ENSSBOG00000028071	-	83	82.500	ENSPSIG00000013811	SRP19	93	81.967	Pelodiscus_sinensis
ENSSBOG00000028071	-	90	69.767	ENSPMGG00000015313	srp19	91	69.767	Periophthalmus_magnuspinnatus
ENSSBOG00000028071	-	100	93.056	ENSPEMG00000004412	-	100	93.056	Peromyscus_maniculatus_bairdii
ENSSBOG00000028071	-	89	67.347	ENSPMAG00000002685	srp19	91	65.116	Petromyzon_marinus
ENSSBOG00000028071	-	90	93.798	ENSPCIG00000010250	SRP19	90	93.846	Phascolarctos_cinereus
ENSSBOG00000028071	-	88	70.866	ENSPFOG00000015887	srp19	89	70.866	Poecilia_formosa
ENSSBOG00000028071	-	88	70.866	ENSPLAG00000007784	srp19	89	70.866	Poecilia_latipinna
ENSSBOG00000028071	-	88	70.079	ENSPMEG00000003056	srp19	89	70.079	Poecilia_mexicana
ENSSBOG00000028071	-	88	70.866	ENSPREG00000017307	srp19	89	70.866	Poecilia_reticulata
ENSSBOG00000028071	-	100	98.611	ENSPPYG00000029584	SRP19	99	98.611	Pongo_abelii
ENSSBOG00000028071	-	94	77.037	ENSPCAG00000000228	SRP19	94	77.037	Procavia_capensis
ENSSBOG00000028071	-	100	99.091	ENSPCOG00000023239	SRP19	100	99.091	Propithecus_coquereli
ENSSBOG00000028071	-	100	97.917	ENSPVAG00000004895	SRP19	100	97.917	Pteropus_vampyrus
ENSSBOG00000028071	-	88	67.460	ENSPNAG00000009392	srp19	88	69.167	Pygocentrus_nattereri
ENSSBOG00000028071	-	100	96.528	ENSRNOG00000020204	Srp19	100	96.528	Rattus_norvegicus
ENSSBOG00000028071	-	68	92.000	ENSRBIG00000031651	-	83	92.000	Rhinopithecus_bieti
ENSSBOG00000028071	-	92	87.218	ENSRBIG00000040440	-	93	87.313	Rhinopithecus_bieti
ENSSBOG00000028071	-	100	99.091	ENSRBIG00000015627	-	100	99.091	Rhinopithecus_bieti
ENSSBOG00000028071	-	92	87.218	ENSRROG00000037054	-	93	87.313	Rhinopithecus_roxellana
ENSSBOG00000028071	-	86	78.226	ENSRROG00000037316	-	92	78.862	Rhinopithecus_roxellana
ENSSBOG00000028071	-	90	72.093	ENSSFOG00015022139	srp19	91	72.093	Scleropages_formosus
ENSSBOG00000028071	-	90	66.667	ENSSMAG00000016803	srp19	90	66.667	Scophthalmus_maximus
ENSSBOG00000028071	-	90	62.857	ENSSDUG00000012930	srp19	91	62.857	Seriola_dumerili
ENSSBOG00000028071	-	55	68.852	ENSSLDG00000021916	-	57	54.545	Seriola_lalandi_dorsalis
ENSSBOG00000028071	-	94	95.556	ENSSARG00000000615	SRP19	94	95.556	Sorex_araneus
ENSSBOG00000028071	-	85	86.179	ENSSPUG00000015769	SRP19	90	86.260	Sphenodon_punctatus
ENSSBOG00000028071	-	100	98.611	ENSSSCG00000026230	SRP19	100	98.611	Sus_scrofa
ENSSBOG00000028071	-	85	85.366	ENSTGUG00000001019	SRP19	91	84.211	Taeniopygia_guttata
ENSSBOG00000028071	-	88	72.308	ENSTRUG00000023119	srp19	90	72.308	Takifugu_rubripes
ENSSBOG00000028071	-	90	70.543	ENSTNIG00000018880	srp19	91	70.543	Tetraodon_nigroviridis
ENSSBOG00000028071	-	100	97.222	ENSTTRG00000001690	SRP19	100	97.222	Tursiops_truncatus
ENSSBOG00000028071	-	100	97.917	ENSUAMG00000000111	SRP19	100	97.917	Ursus_americanus
ENSSBOG00000028071	-	100	98.611	ENSUMAG00000016997	SRP19	100	98.611	Ursus_maritimus
ENSSBOG00000028071	-	100	97.917	ENSVPAG00000006001	SRP19	100	97.917	Vicugna_pacos
ENSSBOG00000028071	-	74	98.113	ENSVVUG00000012423	SRP19	100	98.718	Vulpes_vulpes
ENSSBOG00000028071	-	84	71.901	ENSXETG00000011993	srp19	85	71.901	Xenopus_tropicalis
ENSSBOG00000028071	-	85	67.742	ENSXCOG00000012530	srp19	68	68.421	Xiphophorus_couchianus
ENSSBOG00000028071	-	92	69.697	ENSXMAG00000029788	srp19	89	71.654	Xiphophorus_maculatus