EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000028501 (Gene tree)
Gene ID: 101038808
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 113303 bases
Position: chrJH378212.1:4978469-5091771
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024031	ResIII	PF04851.15	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000040875	-	1163	XM_010349396	ENSSBOP00000024016	118 (aa)	XP_010347698	A0A2K6TWH5
ENSSBOT00000040905	-	1330	XM_003938760	ENSSBOP00000024047	299 (aa)	XP_003938809	A0A2K6TWL8
ENSSBOT00000040890	-	3077	XM_003938759	ENSSBOP00000024031	910 (aa)	XP_003938808	A0A2K6TWJ2

Gene Model

Click here to download ENSSBOG00000028501's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000028501	-	54	33.586	ENSSBOG00000032114	SMARCAD1	84	33.586
ENSSBOG00000028501	-	71	43.524	ENSSBOG00000024672	RAD54L	84	43.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028501	-	100	94.841	ENSG00000197275	RAD54B	100	94.841	Homo_sapiens
ENSSBOG00000028501	-	80	96.143	ENSG00000265817	FSBP	100	96.143	Homo_sapiens
ENSSBOG00000028501	-	99	85.620	ENSAMEG00000005834	-	99	85.620	Ailuropoda_melanoleuca
ENSSBOG00000028501	-	99	54.694	ENSACIG00000013005	rad54b	99	54.694	Amphilophus_citrinellus
ENSSBOG00000028501	-	99	55.283	ENSAOCG00000008523	rad54b	99	55.283	Amphiprion_ocellaris
ENSSBOG00000028501	-	99	55.459	ENSAPEG00000001673	rad54b	99	55.568	Amphiprion_percula
ENSSBOG00000028501	-	99	54.526	ENSATEG00000001527	rad54b	99	54.526	Anabas_testudineus
ENSSBOG00000028501	-	99	68.872	ENSAPLG00000014366	-	99	68.872	Anas_platyrhynchos
ENSSBOG00000028501	-	87	70.765	ENSACAG00000003671	-	99	70.765	Anolis_carolinensis
ENSSBOG00000028501	-	71	97.068	ENSANAG00000019528	-	100	97.068	Aotus_nancymaae
ENSSBOG00000028501	-	99	54.645	ENSACLG00000007826	rad54b	99	54.645	Astatotilapia_calliptera
ENSSBOG00000028501	-	85	57.888	ENSAMXG00000039985	rad54b	95	57.412	Astyanax_mexicanus
ENSSBOG00000028501	-	99	84.048	ENSBTAG00000000632	RAD54B	99	84.048	Bos_taurus
ENSSBOG00000028501	-	78	35.397	WBGene00013792	Y116A8C.13	97	33.490	Caenorhabditis_elegans
ENSSBOG00000028501	-	100	98.242	ENSCJAG00000000080	-	100	98.897	Callithrix_jacchus
ENSSBOG00000028501	-	99	83.425	ENSCAFG00000009179	RAD54B	99	83.425	Canis_familiaris
ENSSBOG00000028501	-	99	83.315	ENSCAFG00020012084	-	99	83.315	Canis_lupus_dingo
ENSSBOG00000028501	-	99	83.718	ENSCHIG00000008230	-	99	83.718	Capra_hircus
ENSSBOG00000028501	-	99	88.242	ENSTSYG00000013234	-	99	88.242	Carlito_syrichta
ENSSBOG00000028501	-	99	82.838	ENSCPOG00000011643	-	99	82.838	Cavia_porcellus
ENSSBOG00000028501	-	100	98.681	ENSCCAG00000011754	-	100	99.172	Cebus_capucinus
ENSSBOG00000028501	-	100	94.176	ENSCATG00000030661	-	100	95.586	Cercocebus_atys
ENSSBOG00000028501	-	100	83.535	ENSCLAG00000010476	-	100	83.535	Chinchilla_lanigera
ENSSBOG00000028501	-	100	93.956	ENSCSAG00000012712	-	100	93.956	Chlorocebus_sabaeus
ENSSBOG00000028501	-	100	70.185	ENSCPBG00000003204	-	99	70.258	Chrysemys_picta_bellii
ENSSBOG00000028501	-	100	94.286	ENSCANG00000017939	-	100	95.310	Colobus_angolensis_palliatus
ENSSBOG00000028501	-	99	78.438	ENSCGRG00001020184	Rad54b	99	78.438	Cricetulus_griseus_chok1gshd
ENSSBOG00000028501	-	99	77.118	ENSCGRG00000016752	Rad54b	99	77.118	Cricetulus_griseus_crigri
ENSSBOG00000028501	-	93	58.974	ENSCSEG00000001601	rad54b	99	58.974	Cynoglossus_semilaevis
ENSSBOG00000028501	-	99	56.209	ENSCVAG00000009200	rad54b	99	56.209	Cyprinodon_variegatus
ENSSBOG00000028501	-	99	53.648	ENSDARG00000092134	rad54b	99	60.522	Danio_rerio
ENSSBOG00000028501	-	99	83.680	ENSDNOG00000015535	-	99	83.680	Dasypus_novemcinctus
ENSSBOG00000028501	-	99	83.407	ENSDORG00000002492	Rad54b	99	83.407	Dipodomys_ordii
ENSSBOG00000028501	-	87	81.496	ENSETEG00000010605	-	100	81.496	Echinops_telfairi
ENSSBOG00000028501	-	99	46.235	ENSEBUG00000009104	rad54b	98	46.235	Eptatretus_burgeri
ENSSBOG00000028501	-	97	84.938	ENSEASG00005004021	-	99	84.938	Equus_asinus_asinus
ENSSBOG00000028501	-	99	85.385	ENSECAG00000021949	-	99	85.385	Equus_caballus
ENSSBOG00000028501	-	83	80.000	ENSEEUG00000008056	-	83	80.000	Erinaceus_europaeus
ENSSBOG00000028501	-	99	53.717	ENSELUG00000009287	rad54b	99	53.927	Esox_lucius
ENSSBOG00000028501	-	99	85.401	ENSFCAG00000015513	-	99	88.276	Felis_catus
ENSSBOG00000028501	-	99	68.450	ENSFALG00000005467	-	99	68.450	Ficedula_albicollis
ENSSBOG00000028501	-	99	85.259	ENSFDAG00000020541	-	100	85.259	Fukomys_damarensis
ENSSBOG00000028501	-	89	57.473	ENSFHEG00000014382	rad54b	90	57.594	Fundulus_heteroclitus
ENSSBOG00000028501	-	86	56.587	ENSGMOG00000014774	rad54b	98	56.587	Gadus_morhua
ENSSBOG00000028501	-	100	67.606	ENSGALG00000043597	RAD54B	99	67.606	Gallus_gallus
ENSSBOG00000028501	-	99	54.913	ENSGAFG00000007901	rad54b	99	54.913	Gambusia_affinis
ENSSBOG00000028501	-	99	54.946	ENSGACG00000009128	rad54b	99	54.946	Gasterosteus_aculeatus
ENSSBOG00000028501	-	100	69.967	ENSGAGG00000018747	-	99	69.967	Gopherus_agassizii
ENSSBOG00000028501	-	99	94.286	ENSGGOG00000023516	-	99	94.286	Gorilla_gorilla
ENSSBOG00000028501	-	99	53.583	ENSHBUG00000016017	rad54b	99	53.583	Haplochromis_burtoni
ENSSBOG00000028501	-	99	83.060	ENSHGLG00000008263	RAD54B	99	83.060	Heterocephalus_glaber_female
ENSSBOG00000028501	-	99	82.302	ENSHGLG00100008108	-	99	82.302	Heterocephalus_glaber_male
ENSSBOG00000028501	-	99	52.366	ENSHCOG00000004764	rad54b	98	55.817	Hippocampus_comes
ENSSBOG00000028501	-	99	52.270	ENSIPUG00000018531	rad54b	99	52.270	Ictalurus_punctatus
ENSSBOG00000028501	-	99	83.885	ENSSTOG00000010791	-	99	83.885	Ictidomys_tridecemlineatus
ENSSBOG00000028501	-	99	80.989	ENSJJAG00000010314	Rad54b	99	80.989	Jaculus_jaculus
ENSSBOG00000028501	-	99	53.057	ENSKMAG00000004744	rad54b	99	53.057	Kryptolebias_marmoratus
ENSSBOG00000028501	-	82	69.467	ENSLACG00000000859	-	100	69.467	Latimeria_chalumnae
ENSSBOG00000028501	-	99	57.705	ENSLOCG00000010100	rad54b	96	62.637	Lepisosteus_oculatus
ENSSBOG00000028501	-	89	83.663	ENSLAFG00000015315	-	100	83.663	Loxodonta_africana
ENSSBOG00000028501	-	100	94.176	ENSMFAG00000031629	-	100	95.448	Macaca_fascicularis
ENSSBOG00000028501	-	100	94.176	ENSMMUG00000005659	-	100	94.176	Macaca_mulatta
ENSSBOG00000028501	-	100	93.956	ENSMNEG00000016408	-	100	93.956	Macaca_nemestrina
ENSSBOG00000028501	-	100	94.286	ENSMLEG00000006946	-	100	94.286	Mandrillus_leucophaeus
ENSSBOG00000028501	-	99	55.363	ENSMAMG00000012269	rad54b	99	55.363	Mastacembelus_armatus
ENSSBOG00000028501	-	99	53.583	ENSMZEG00005005281	rad54b	97	58.416	Maylandia_zebra
ENSSBOG00000028501	-	100	67.861	ENSMGAG00000012024	-	99	67.861	Meleagris_gallopavo
ENSSBOG00000028501	-	99	77.827	ENSMAUG00000013586	Rad54b	99	77.827	Mesocricetus_auratus
ENSSBOG00000028501	-	99	83.077	ENSMICG00000000754	-	99	83.077	Microcebus_murinus
ENSSBOG00000028501	-	100	76.670	ENSMOCG00000020035	Rad54b	99	76.670	Microtus_ochrogaster
ENSSBOG00000028501	-	99	54.289	ENSMMOG00000003394	rad54b	99	54.289	Mola_mola
ENSSBOG00000028501	-	88	76.339	ENSMODG00000007343	-	99	76.339	Monodelphis_domestica
ENSSBOG00000028501	-	71	58.540	ENSMALG00000001520	rad54b	99	58.540	Monopterus_albus
ENSSBOG00000028501	-	100	77.193	MGP_CAROLIEiJ_G0025810	Rad54b	100	77.193	Mus_caroli
ENSSBOG00000028501	-	100	76.948	ENSMUSG00000078773	Rad54b	100	76.948	Mus_musculus
ENSSBOG00000028501	-	100	77.278	MGP_PahariEiJ_G0023933	Rad54b	100	77.278	Mus_pahari
ENSSBOG00000028501	-	100	77.632	MGP_SPRETEiJ_G0026758	Rad54b	100	77.632	Mus_spretus
ENSSBOG00000028501	-	89	86.032	ENSMPUG00000008878	-	99	86.032	Mustela_putorius_furo
ENSSBOG00000028501	-	100	83.114	ENSMLUG00000008953	-	100	83.114	Myotis_lucifugus
ENSSBOG00000028501	-	99	81.619	ENSNGAG00000017537	Rad54b	99	81.619	Nannospalax_galili
ENSSBOG00000028501	-	99	54.694	ENSNBRG00000013394	rad54b	99	54.694	Neolamprologus_brichardi
ENSSBOG00000028501	-	100	94.731	ENSNLEG00000003062	-	99	95.730	Nomascus_leucogenys
ENSSBOG00000028501	-	83	71.774	ENSMEUG00000012426	-	83	71.774	Notamacropus_eugenii
ENSSBOG00000028501	-	78	85.162	ENSODEG00000002650	-	95	85.162	Octodon_degus
ENSSBOG00000028501	-	99	82.709	ENSODEG00000019564	-	99	82.709	Octodon_degus
ENSSBOG00000028501	-	99	55.184	ENSONIG00000006067	rad54b	99	55.184	Oreochromis_niloticus
ENSSBOG00000028501	-	82	76.729	ENSOANG00000011348	-	99	76.729	Ornithorhynchus_anatinus
ENSSBOG00000028501	-	99	84.396	ENSOCUG00000016478	-	99	84.396	Oryctolagus_cuniculus
ENSSBOG00000028501	-	99	54.334	ENSORLG00000008918	rad54b	99	62.133	Oryzias_latipes
ENSSBOG00000028501	-	71	62.287	ENSORLG00020012171	rad54b	99	62.287	Oryzias_latipes_hni
ENSSBOG00000028501	-	99	54.488	ENSORLG00015018536	rad54b	99	54.488	Oryzias_latipes_hsok
ENSSBOG00000028501	-	84	59.690	ENSOMEG00000004345	rad54b	99	59.690	Oryzias_melastigma
ENSSBOG00000028501	-	99	85.934	ENSOGAG00000007854	-	99	85.934	Otolemur_garnettii
ENSSBOG00000028501	-	89	85.802	ENSOARG00000007691	-	99	85.802	Ovis_aries
ENSSBOG00000028501	-	100	93.085	ENSPPAG00000029572	-	100	93.085	Pan_paniscus
ENSSBOG00000028501	-	99	85.620	ENSPPRG00000007571	-	99	88.414	Panthera_pardus
ENSSBOG00000028501	-	80	88.414	ENSPTIG00000012670	-	99	88.414	Panthera_tigris_altaica
ENSSBOG00000028501	-	100	94.731	ENSPTRG00000020427	-	100	96.006	Pan_troglodytes
ENSSBOG00000028501	-	100	94.396	ENSPANG00000019566	-	100	94.396	Papio_anubis
ENSSBOG00000028501	-	99	58.568	ENSPKIG00000014974	rad54b	99	58.568	Paramormyrops_kingsleyae
ENSSBOG00000028501	-	100	68.444	ENSPSIG00000002383	-	97	73.250	Pelodiscus_sinensis
ENSSBOG00000028501	-	99	78.375	ENSPEMG00000012133	Rad54b	99	78.375	Peromyscus_maniculatus_bairdii
ENSSBOG00000028501	-	87	58.603	ENSPMAG00000002916	rad54b	99	58.603	Petromyzon_marinus
ENSSBOG00000028501	-	89	76.695	ENSPCIG00000020151	-	94	76.770	Phascolarctos_cinereus
ENSSBOG00000028501	-	99	54.497	ENSPFOG00000023411	rad54b	99	54.497	Poecilia_formosa
ENSSBOG00000028501	-	99	54.709	ENSPLAG00000010430	rad54b	99	54.709	Poecilia_latipinna
ENSSBOG00000028501	-	99	54.603	ENSPMEG00000016873	rad54b	99	54.603	Poecilia_mexicana
ENSSBOG00000028501	-	99	54.555	ENSPREG00000018443	rad54b	99	54.555	Poecilia_reticulata
ENSSBOG00000028501	-	100	94.512	ENSPPYG00000018750	-	100	94.512	Pongo_abelii
ENSSBOG00000028501	-	99	88.571	ENSPCOG00000026845	-	99	89.241	Propithecus_coquereli
ENSSBOG00000028501	-	87	88.529	ENSPVAG00000000261	-	92	88.529	Pteropus_vampyrus
ENSSBOG00000028501	-	86	59.114	ENSPNYG00000018303	rad54b	96	59.189	Pundamilia_nyererei
ENSSBOG00000028501	-	100	53.598	ENSPNAG00000000295	rad54b	99	53.598	Pygocentrus_nattereri
ENSSBOG00000028501	-	99	74.424	ENSRNOG00000039949	Rad54b	99	74.424	Rattus_norvegicus
ENSSBOG00000028501	-	100	93.846	ENSRBIG00000020419	-	100	93.846	Rhinopithecus_bieti
ENSSBOG00000028501	-	100	93.846	ENSRROG00000039897	-	100	93.846	Rhinopithecus_roxellana
ENSSBOG00000028501	-	81	36.364	YBR073W	RDH54	82	36.842	Saccharomyces_cerevisiae
ENSSBOG00000028501	-	100	73.632	ENSSHAG00000017038	-	100	73.632	Sarcophilus_harrisii
ENSSBOG00000028501	-	63	65.614	ENSSFOG00015008483	rad54b	88	65.614	Scleropages_formosus
ENSSBOG00000028501	-	99	53.814	ENSSMAG00000018659	rad54b	99	54.396	Scophthalmus_maximus
ENSSBOG00000028501	-	99	54.051	ENSSDUG00000001122	rad54b	98	54.051	Seriola_dumerili
ENSSBOG00000028501	-	99	53.911	ENSSLDG00000013787	rad54b	99	53.911	Seriola_lalandi_dorsalis
ENSSBOG00000028501	-	100	68.122	ENSSPUG00000016497	-	99	68.122	Sphenodon_punctatus
ENSSBOG00000028501	-	99	55.120	ENSSPAG00000012800	rad54b	99	55.120	Stegastes_partitus
ENSSBOG00000028501	-	100	83.516	ENSSSCG00000006101	-	99	86.608	Sus_scrofa
ENSSBOG00000028501	-	99	67.570	ENSTGUG00000011880	-	99	67.570	Taeniopygia_guttata
ENSSBOG00000028501	-	99	53.439	ENSTRUG00000010015	rad54b	99	53.862	Takifugu_rubripes
ENSSBOG00000028501	-	99	81.958	ENSTTRG00000006312	-	99	81.958	Tursiops_truncatus
ENSSBOG00000028501	-	99	85.620	ENSUMAG00000016401	-	99	85.620	Ursus_maritimus
ENSSBOG00000028501	-	99	83.168	ENSVPAG00000003157	-	99	83.168	Vicugna_pacos
ENSSBOG00000028501	-	99	54.208	ENSXETG00000025924	rad54b	99	59.301	Xenopus_tropicalis
ENSSBOG00000028501	-	99	54.913	ENSXMAG00000013141	rad54b	99	54.913	Xiphophorus_maculatus