EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000028573 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 5060 bases
Position: chrJH378312.1:20716-25775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	1	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	2	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	3	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	4	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	5	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	6	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	7	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	8	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	9	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	10	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	11	12
ENSSBOP00000024165	zf-C2H2	PF00096.26	6e-63	12	12
ENSSBOP00000024165	zf-met	PF12874.7	0.00019	1	3
ENSSBOP00000024165	zf-met	PF12874.7	0.00019	2	3
ENSSBOP00000024165	zf-met	PF12874.7	0.00019	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000041025	-	3090	XM_010332090	ENSSBOP00000024165	649 (aa)	XP_010330392	A0A2K6TWW8

Gene Model

Click here to download ENSSBOG00000028573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000028573	-	81	54.936	ENSSBOG00000028285	ZNF235	70	54.936
ENSSBOG00000028573	-	85	36.740	ENSSBOG00000026654	ZFP64	79	37.619
ENSSBOG00000028573	-	76	56.502	ENSSBOG00000021951	ZNF772	79	56.502
ENSSBOG00000028573	-	79	48.208	ENSSBOG00000020206	ZFP1	81	48.208
ENSSBOG00000028573	-	100	45.455	ENSSBOG00000018054	ZNF317	85	46.486
ENSSBOG00000028573	-	76	37.712	ENSSBOG00000018861	ZNF319	88	37.924
ENSSBOG00000028573	-	76	36.034	ENSSBOG00000027597	ZNF574	81	36.096
ENSSBOG00000028573	-	81	51.887	ENSSBOG00000022450	-	94	48.547
ENSSBOG00000028573	-	76	41.011	ENSSBOG00000022100	PRDM5	94	46.610
ENSSBOG00000028573	-	99	53.681	ENSSBOG00000024080	ZNF582	86	53.681
ENSSBOG00000028573	-	82	54.392	ENSSBOG00000027061	ZNF829	82	54.392
ENSSBOG00000028573	-	93	51.600	ENSSBOG00000019663	ZNF768	82	50.385
ENSSBOG00000028573	-	82	53.285	ENSSBOG00000029619	ZFP69B	77	53.285
ENSSBOG00000028573	-	100	55.000	ENSSBOG00000029886	ZNF836	94	58.881
ENSSBOG00000028573	-	86	58.562	ENSSBOG00000029728	-	92	58.562
ENSSBOG00000028573	-	74	36.154	ENSSBOG00000028137	ZBTB41	50	35.849
ENSSBOG00000028573	-	79	49.672	ENSSBOG00000025431	ZNF564	86	49.672
ENSSBOG00000028573	-	100	43.103	ENSSBOG00000020798	ZNF81	93	43.103
ENSSBOG00000028573	-	81	55.022	ENSSBOG00000030730	ZNF2	68	55.022
ENSSBOG00000028573	-	76	51.902	ENSSBOG00000024486	ZNF791	90	51.902
ENSSBOG00000028573	-	87	54.250	ENSSBOG00000022380	-	83	54.250
ENSSBOG00000028573	-	84	54.018	ENSSBOG00000023651	ZNF112	72	50.000
ENSSBOG00000028573	-	81	55.236	ENSSBOG00000025050	ZNF226	77	55.236
ENSSBOG00000028573	-	78	52.217	ENSSBOG00000028208	ZNF418	95	49.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028573	-	73	34.961	ENSAPOG00000001097	-	59	34.961	Acanthochromis_polyacanthus
ENSSBOG00000028573	-	78	34.565	ENSATEG00000014755	-	73	37.500	Anabas_testudineus
ENSSBOG00000028573	-	100	57.115	ENSCSAG00000001938	ZNF845	99	59.588	Chlorocebus_sabaeus
ENSSBOG00000028573	-	84	42.766	ENSCSAVG00000007589	-	100	42.766	Ciona_savignyi
ENSSBOG00000028573	-	82	51.750	ENSCSAVG00000001989	-	100	50.829	Ciona_savignyi
ENSSBOG00000028573	-	98	56.920	ENSCANG00000038794	ZNF845	99	59.588	Colobus_angolensis_palliatus
ENSSBOG00000028573	-	81	51.206	ENSCGRG00001024630	-	82	51.206	Cricetulus_griseus_chok1gshd
ENSSBOG00000028573	-	81	47.071	ENSEBUG00000007308	ZNF845	93	47.071	Eptatretus_burgeri
ENSSBOG00000028573	-	79	48.501	ENSEBUG00000008852	ZNF845	78	50.204	Eptatretus_burgeri
ENSSBOG00000028573	-	80	49.885	ENSEBUG00000012628	ZNF845	82	48.387	Eptatretus_burgeri
ENSSBOG00000028573	-	86	51.927	ENSEBUG00000008988	ZNF845	91	48.780	Eptatretus_burgeri
ENSSBOG00000028573	-	74	40.698	ENSFHEG00000004454	-	90	40.698	Fundulus_heteroclitus
ENSSBOG00000028573	-	78	35.376	ENSHBUG00000009720	-	64	35.376	Haplochromis_burtoni
ENSSBOG00000028573	-	100	57.078	ENSMLEG00000044333	ZNF845	96	59.794	Mandrillus_leucophaeus
ENSSBOG00000028573	-	82	34.961	ENSMAMG00000018536	-	61	34.961	Mastacembelus_armatus
ENSSBOG00000028573	-	82	35.376	ENSMZEG00005020085	-	91	37.949	Maylandia_zebra
ENSSBOG00000028573	-	86	52.581	ENSMAUG00000014247	-	89	51.633	Mesocricetus_auratus
ENSSBOG00000028573	-	99	52.490	ENSMOCG00000002167	Zfp712	99	52.490	Microtus_ochrogaster
ENSSBOG00000028573	-	77	35.474	ENSMALG00000013321	-	66	35.474	Monopterus_albus
ENSSBOG00000028573	-	99	47.930	MGP_CAROLIEiJ_G0018661	Zfp759	100	48.780	Mus_caroli
ENSSBOG00000028573	-	84	54.361	ENSMUSG00000095432	Zfp748	92	54.361	Mus_musculus
ENSSBOG00000028573	-	99	47.495	ENSMUSG00000057396	Zfp759	100	48.577	Mus_musculus
ENSSBOG00000028573	-	80	54.158	MGP_PahariEiJ_G0015756	Zfp748	92	54.158	Mus_pahari
ENSSBOG00000028573	-	99	50.000	MGP_PahariEiJ_G0015741	Zfp759	99	50.309	Mus_pahari
ENSSBOG00000028573	-	98	46.923	MGP_SPRETEiJ_G0019544	Zfp759	99	48.577	Mus_spretus
ENSSBOG00000028573	-	84	54.361	MGP_SPRETEiJ_G0019560	Zfp748	92	54.361	Mus_spretus
ENSSBOG00000028573	-	100	57.951	ENSNLEG00000006172	ZNF845	96	59.794	Nomascus_leucogenys
ENSSBOG00000028573	-	75	33.509	ENSORLG00000028851	-	66	33.509	Oryzias_latipes
ENSSBOG00000028573	-	74	33.933	ENSOMEG00000010300	-	89	33.933	Oryzias_melastigma
ENSSBOG00000028573	-	99	54.149	ENSOGAG00000029343	-	99	54.149	Otolemur_garnettii
ENSSBOG00000028573	-	100	57.492	ENSPTRG00000050668	ZNF845	96	59.381	Pan_troglodytes
ENSSBOG00000028573	-	89	56.301	ENSPEMG00000021548	Zfp712	99	56.301	Peromyscus_maniculatus_bairdii
ENSSBOG00000028573	-	98	49.598	ENSPEMG00000020934	-	99	49.598	Peromyscus_maniculatus_bairdii
ENSSBOG00000028573	-	80	33.504	ENSPFOG00000010474	-	98	34.657	Poecilia_formosa
ENSSBOG00000028573	-	80	33.426	ENSPLAG00000017843	-	89	34.182	Poecilia_latipinna
ENSSBOG00000028573	-	79	33.426	ENSPMEG00000017809	-	63	33.426	Poecilia_mexicana
ENSSBOG00000028573	-	74	34.819	ENSPNYG00000021795	-	64	34.819	Pundamilia_nyererei
ENSSBOG00000028573	-	85	54.634	ENSRNOG00000049259	LOC102549842	99	54.634	Rattus_norvegicus
ENSSBOG00000028573	-	100	57.787	ENSRBIG00000035402	-	94	57.938	Rhinopithecus_bieti
ENSSBOG00000028573	-	73	34.444	ENSSDUG00000010305	-	69	34.349	Seriola_dumerili
ENSSBOG00000028573	-	78	33.933	ENSSPAG00000010470	-	60	33.933	Stegastes_partitus