EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000028579 (Gene tree)
Gene ID: 101029042
Gene Symbol: TSN
Alias: BCLF-1|REHF-1|TRSLN
Full Name: translin
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 12870 bases
Position: chrJH378150.1:10219387-10232256
Accession: 12379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024226	Translin	PF01997.16	1.8e-56	1	1
ENSSBOP00000024252	Translin	PF01997.16	8.3e-55	1	1
ENSSBOP00000024232	Translin	PF01997.16	3.8e-19	1	1
ENSSBOP00000024241	Translin	PF01997.16	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000041101	TSN-203	360	-	ENSSBOP00000024241	119 (aa)	-	A0A2K6TX46
ENSSBOT00000041112	TSN-204	672	-	ENSSBOP00000024252	223 (aa)	-	A0A2K6TX79
ENSSBOT00000041086	TSN-201	3583	XM_003931572	ENSSBOP00000024226	228 (aa)	XP_003931621	A0A2K6TX32
ENSSBOT00000041092	TSN-202	1198	XM_010342189	ENSSBOP00000024232	148 (aa)	XP_010340491	A0A2K6TX60

Gene Model

Click here to download ENSSBOG00000028579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000028579	TSN	97	92.174	ENSSBOG00000015719	-	83	94.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028579	TSN	100	100.000	ENSG00000211460	TSN	100	100.000	Homo_sapiens
ENSSBOG00000028579	TSN	100	78.509	ENSAPOG00000002063	tsn	100	78.509	Acanthochromis_polyacanthus
ENSSBOG00000028579	TSN	100	99.123	ENSAMEG00000005055	TSN	100	99.123	Ailuropoda_melanoleuca
ENSSBOG00000028579	TSN	100	79.386	ENSACIG00000021694	tsn	100	79.386	Amphilophus_citrinellus
ENSSBOG00000028579	TSN	100	78.509	ENSAOCG00000015574	tsn	100	80.097	Amphiprion_ocellaris
ENSSBOG00000028579	TSN	100	78.509	ENSAPEG00000001677	tsn	100	78.509	Amphiprion_percula
ENSSBOG00000028579	TSN	99	77.333	ENSATEG00000004115	tsn	99	77.333	Anabas_testudineus
ENSSBOG00000028579	TSN	60	30.519	ENSAPLG00000013433	-	53	30.519	Anas_platyrhynchos
ENSSBOG00000028579	TSN	97	82.609	ENSACAG00000004757	TSN	99	84.932	Anolis_carolinensis
ENSSBOG00000028579	TSN	100	100.000	ENSANAG00000026842	TSN	100	100.000	Aotus_nancymaae
ENSSBOG00000028579	TSN	100	79.386	ENSACLG00000020831	tsn	100	79.386	Astatotilapia_calliptera
ENSSBOG00000028579	TSN	100	77.632	ENSAMXG00000035417	tsn	100	77.632	Astyanax_mexicanus
ENSSBOG00000028579	TSN	100	99.123	ENSBTAG00000006059	TSN	100	99.123	Bos_taurus
ENSSBOG00000028579	TSN	100	99.561	ENSCJAG00000044533	-	100	99.561	Callithrix_jacchus
ENSSBOG00000028579	TSN	100	100.000	ENSCJAG00000047222	-	100	100.000	Callithrix_jacchus
ENSSBOG00000028579	TSN	99	86.667	ENSCJAG00000008511	-	93	86.667	Callithrix_jacchus
ENSSBOG00000028579	TSN	99	99.119	ENSCAFG00000004700	TSN	94	99.119	Canis_familiaris
ENSSBOG00000028579	TSN	100	99.123	ENSCAFG00020011747	TSN	100	99.123	Canis_lupus_dingo
ENSSBOG00000028579	TSN	100	99.123	ENSCHIG00000010715	TSN	100	99.123	Capra_hircus
ENSSBOG00000028579	TSN	100	98.684	ENSTSYG00000004395	TSN	100	98.684	Carlito_syrichta
ENSSBOG00000028579	TSN	92	80.583	ENSCAPG00000015595	TSN	81	80.583	Cavia_aperea
ENSSBOG00000028579	TSN	100	99.561	ENSCPOG00000035645	TSN	100	99.561	Cavia_porcellus
ENSSBOG00000028579	TSN	97	81.897	ENSCCAG00000034886	-	84	85.526	Cebus_capucinus
ENSSBOG00000028579	TSN	100	99.561	ENSCCAG00000026371	TSN	100	99.561	Cebus_capucinus
ENSSBOG00000028579	TSN	100	99.561	ENSCATG00000032155	TSN	100	99.561	Cercocebus_atys
ENSSBOG00000028579	TSN	100	99.561	ENSCLAG00000006171	TSN	100	99.561	Chinchilla_lanigera
ENSSBOG00000028579	TSN	100	99.561	ENSCSAG00000016712	TSN	100	99.561	Chlorocebus_sabaeus
ENSSBOG00000028579	TSN	97	77.391	ENSCPBG00000018116	-	97	76.577	Chrysemys_picta_bellii
ENSSBOG00000028579	TSN	97	86.957	ENSCPBG00000013741	-	80	88.079	Chrysemys_picta_bellii
ENSSBOG00000028579	TSN	95	45.161	ENSCING00000012612	-	99	45.161	Ciona_intestinalis
ENSSBOG00000028579	TSN	97	43.498	ENSCSAVG00000009485	-	99	43.498	Ciona_savignyi
ENSSBOG00000028579	TSN	100	99.561	ENSCANG00000041881	TSN	100	99.561	Colobus_angolensis_palliatus
ENSSBOG00000028579	TSN	100	99.561	ENSCGRG00001018233	Tsn	100	99.561	Cricetulus_griseus_chok1gshd
ENSSBOG00000028579	TSN	100	99.561	ENSCGRG00000008331	Tsn	100	99.561	Cricetulus_griseus_crigri
ENSSBOG00000028579	TSN	100	75.877	ENSCSEG00000005825	tsn	100	75.877	Cynoglossus_semilaevis
ENSSBOG00000028579	TSN	98	70.536	ENSCVAG00000022024	tsn	99	70.982	Cyprinodon_variegatus
ENSSBOG00000028579	TSN	98	79.464	ENSDARG00000041830	tsn	99	79.464	Danio_rerio
ENSSBOG00000028579	TSN	100	98.684	ENSDNOG00000025740	TSN	100	98.684	Dasypus_novemcinctus
ENSSBOG00000028579	TSN	100	99.561	ENSDORG00000026251	-	100	99.561	Dipodomys_ordii
ENSSBOG00000028579	TSN	95	52.778	FBgn0033528	trsn	91	52.778	Drosophila_melanogaster
ENSSBOG00000028579	TSN	100	99.123	ENSEASG00005004774	TSN	100	99.123	Equus_asinus_asinus
ENSSBOG00000028579	TSN	100	99.123	ENSECAG00000015930	TSN	100	99.123	Equus_caballus
ENSSBOG00000028579	TSN	78	98.276	ENSEEUG00000013935	TSN	100	98.276	Erinaceus_europaeus
ENSSBOG00000028579	TSN	100	79.386	ENSELUG00000007669	tsn	100	79.386	Esox_lucius
ENSSBOG00000028579	TSN	100	99.123	ENSFCAG00000027149	TSN	100	99.123	Felis_catus
ENSSBOG00000028579	TSN	76	74.118	ENSFCAG00000022306	-	96	74.118	Felis_catus
ENSSBOG00000028579	TSN	93	86.538	ENSFALG00000013247	TSN	96	83.258	Ficedula_albicollis
ENSSBOG00000028579	TSN	100	99.561	ENSFDAG00000012302	TSN	100	99.561	Fukomys_damarensis
ENSSBOG00000028579	TSN	100	78.509	ENSFHEG00000015531	tsn	100	78.509	Fundulus_heteroclitus
ENSSBOG00000028579	TSN	98	77.232	ENSGMOG00000009247	tsn	99	77.232	Gadus_morhua
ENSSBOG00000028579	TSN	100	86.900	ENSGALG00000011652	TSN	100	86.900	Gallus_gallus
ENSSBOG00000028579	TSN	100	78.070	ENSGAFG00000003816	tsn	100	78.070	Gambusia_affinis
ENSSBOG00000028579	TSN	97	78.378	ENSGACG00000000235	tsn	97	78.378	Gasterosteus_aculeatus
ENSSBOG00000028579	TSN	100	100.000	ENSGGOG00000002216	TSN	100	100.000	Gorilla_gorilla
ENSSBOG00000028579	TSN	100	78.509	ENSHBUG00000002340	tsn	85	78.509	Haplochromis_burtoni
ENSSBOG00000028579	TSN	100	99.561	ENSHGLG00000007038	TSN	100	99.561	Heterocephalus_glaber_female
ENSSBOG00000028579	TSN	100	99.561	ENSHGLG00100000069	TSN	100	99.561	Heterocephalus_glaber_male
ENSSBOG00000028579	TSN	98	78.027	ENSHCOG00000001756	tsn	99	78.027	Hippocampus_comes
ENSSBOG00000028579	TSN	100	78.509	ENSIPUG00000021370	tsn	100	78.509	Ictalurus_punctatus
ENSSBOG00000028579	TSN	100	99.561	ENSSTOG00000000972	TSN	100	99.561	Ictidomys_tridecemlineatus
ENSSBOG00000028579	TSN	100	98.684	ENSJJAG00000006730	Tsn	100	98.684	Jaculus_jaculus
ENSSBOG00000028579	TSN	100	78.509	ENSKMAG00000004996	tsn	100	78.509	Kryptolebias_marmoratus
ENSSBOG00000028579	TSN	98	78.125	ENSLBEG00000012620	tsn	99	78.125	Labrus_bergylta
ENSSBOG00000028579	TSN	98	59.031	ENSLACG00000005246	TSN	99	59.031	Latimeria_chalumnae
ENSSBOG00000028579	TSN	98	79.464	ENSLOCG00000002191	tsn	97	79.464	Lepisosteus_oculatus
ENSSBOG00000028579	TSN	97	96.522	ENSLAFG00000032428	TSN	100	90.909	Loxodonta_africana
ENSSBOG00000028579	TSN	100	99.561	ENSMFAG00000044217	TSN	100	99.561	Macaca_fascicularis
ENSSBOG00000028579	TSN	100	99.561	ENSMMUG00000021119	TSN	100	99.561	Macaca_mulatta
ENSSBOG00000028579	TSN	100	99.561	ENSMNEG00000040632	TSN	100	99.561	Macaca_nemestrina
ENSSBOG00000028579	TSN	97	98.261	ENSMLEG00000038656	TSN	96	100.000	Mandrillus_leucophaeus
ENSSBOG00000028579	TSN	100	78.070	ENSMAMG00000019536	tsn	100	78.070	Mastacembelus_armatus
ENSSBOG00000028579	TSN	100	79.386	ENSMZEG00005018715	tsn	85	79.386	Maylandia_zebra
ENSSBOG00000028579	TSN	78	86.207	ENSMGAG00000011956	TSN	89	86.207	Meleagris_gallopavo
ENSSBOG00000028579	TSN	92	99.029	ENSMAUG00000018800	Tsn	100	99.029	Mesocricetus_auratus
ENSSBOG00000028579	TSN	100	99.561	ENSMICG00000015793	TSN	100	99.561	Microcebus_murinus
ENSSBOG00000028579	TSN	100	98.684	ENSMOCG00000013248	Tsn	100	98.684	Microtus_ochrogaster
ENSSBOG00000028579	TSN	92	77.670	ENSMMOG00000019661	tsn	100	77.670	Mola_mola
ENSSBOG00000028579	TSN	100	93.013	ENSMODG00000000147	TSN	100	93.013	Monodelphis_domestica
ENSSBOG00000028579	TSN	100	78.070	ENSMALG00000001827	tsn	100	78.070	Monopterus_albus
ENSSBOG00000028579	TSN	100	99.123	ENSMUSG00000026374	Tsn	100	99.123	Mus_musculus
ENSSBOG00000028579	TSN	100	99.123	MGP_PahariEiJ_G0027742	Tsn	100	99.123	Mus_pahari
ENSSBOG00000028579	TSN	100	99.123	MGP_SPRETEiJ_G0015313	Tsn	100	99.123	Mus_spretus
ENSSBOG00000028579	TSN	100	99.123	ENSMPUG00000001056	TSN	100	99.123	Mustela_putorius_furo
ENSSBOG00000028579	TSN	55	31.206	ENSMLUG00000028551	-	83	31.206	Myotis_lucifugus
ENSSBOG00000028579	TSN	92	98.544	ENSMLUG00000012656	TSN	100	98.544	Myotis_lucifugus
ENSSBOG00000028579	TSN	100	99.561	ENSNGAG00000010353	Tsn	100	99.561	Nannospalax_galili
ENSSBOG00000028579	TSN	100	78.947	ENSNBRG00000001193	tsn	100	78.947	Neolamprologus_brichardi
ENSSBOG00000028579	TSN	100	99.561	ENSNLEG00000032773	TSN	100	99.561	Nomascus_leucogenys
ENSSBOG00000028579	TSN	97	93.913	ENSMEUG00000006228	TSN	100	72.807	Notamacropus_eugenii
ENSSBOG00000028579	TSN	62	78.417	ENSOPRG00000004858	-	99	78.417	Ochotona_princeps
ENSSBOG00000028579	TSN	100	99.561	ENSODEG00000008386	-	100	99.561	Octodon_degus
ENSSBOG00000028579	TSN	100	80.263	ENSODEG00000005998	-	100	80.263	Octodon_degus
ENSSBOG00000028579	TSN	100	78.947	ENSONIG00000017060	tsn	100	78.947	Oreochromis_niloticus
ENSSBOG00000028579	TSN	93	93.237	ENSOANG00000003457	TSN	100	93.237	Ornithorhynchus_anatinus
ENSSBOG00000028579	TSN	100	99.123	ENSOCUG00000023529	TSN	100	99.123	Oryctolagus_cuniculus
ENSSBOG00000028579	TSN	100	78.509	ENSORLG00000010049	tsn	100	78.509	Oryzias_latipes
ENSSBOG00000028579	TSN	98	78.571	ENSORLG00020016476	tsn	99	78.571	Oryzias_latipes_hni
ENSSBOG00000028579	TSN	97	72.174	ENSORLG00020017000	-	84	74.306	Oryzias_latipes_hni
ENSSBOG00000028579	TSN	100	78.070	ENSORLG00015019192	tsn	100	78.070	Oryzias_latipes_hsok
ENSSBOG00000028579	TSN	100	78.509	ENSOMEG00000016335	tsn	100	78.509	Oryzias_melastigma
ENSSBOG00000028579	TSN	100	99.561	ENSOGAG00000030436	TSN	100	99.561	Otolemur_garnettii
ENSSBOG00000028579	TSN	100	99.123	ENSOARG00000013339	TSN	100	99.123	Ovis_aries
ENSSBOG00000028579	TSN	100	100.000	ENSPPAG00000032878	TSN	100	100.000	Pan_paniscus
ENSSBOG00000028579	TSN	100	99.123	ENSPPRG00000006531	TSN	99	99.123	Panthera_pardus
ENSSBOG00000028579	TSN	96	65.455	ENSPPRG00000004174	-	94	65.455	Panthera_pardus
ENSSBOG00000028579	TSN	100	91.892	ENSPTIG00000012953	TSN	99	91.892	Panthera_tigris_altaica
ENSSBOG00000028579	TSN	100	100.000	ENSPTRG00000012420	TSN	100	100.000	Pan_troglodytes
ENSSBOG00000028579	TSN	100	99.561	ENSPANG00000000733	TSN	100	99.561	Papio_anubis
ENSSBOG00000028579	TSN	98	78.125	ENSPKIG00000002005	tsn	99	78.125	Paramormyrops_kingsleyae
ENSSBOG00000028579	TSN	78	89.143	ENSPSIG00000006064	TSN	96	89.143	Pelodiscus_sinensis
ENSSBOG00000028579	TSN	96	79.091	ENSPMGG00000015287	tsn	97	79.091	Periophthalmus_magnuspinnatus
ENSSBOG00000028579	TSN	97	66.968	ENSPMAG00000009161	tsn	95	66.968	Petromyzon_marinus
ENSSBOG00000028579	TSN	93	95.652	ENSPCIG00000023491	TSN	100	95.631	Phascolarctos_cinereus
ENSSBOG00000028579	TSN	100	78.509	ENSPFOG00000016063	tsn	100	78.509	Poecilia_formosa
ENSSBOG00000028579	TSN	100	78.509	ENSPLAG00000010654	tsn	100	78.509	Poecilia_latipinna
ENSSBOG00000028579	TSN	100	78.070	ENSPMEG00000023570	tsn	100	78.070	Poecilia_mexicana
ENSSBOG00000028579	TSN	100	78.070	ENSPREG00000003481	tsn	100	78.070	Poecilia_reticulata
ENSSBOG00000028579	TSN	100	99.561	ENSPPYG00000012774	TSN	100	99.561	Pongo_abelii
ENSSBOG00000028579	TSN	78	97.126	ENSPCAG00000003549	TSN	100	97.126	Procavia_capensis
ENSSBOG00000028579	TSN	100	99.561	ENSPCOG00000011045	TSN	100	99.561	Propithecus_coquereli
ENSSBOG00000028579	TSN	100	99.123	ENSPVAG00000016702	TSN	100	99.123	Pteropus_vampyrus
ENSSBOG00000028579	TSN	100	79.386	ENSPNYG00000012396	tsn	85	79.386	Pundamilia_nyererei
ENSSBOG00000028579	TSN	100	77.632	ENSPNAG00000018140	tsn	100	77.632	Pygocentrus_nattereri
ENSSBOG00000028579	TSN	100	99.561	ENSRNOG00000002319	Tsn	100	99.561	Rattus_norvegicus
ENSSBOG00000028579	TSN	100	99.561	ENSRBIG00000041316	TSN	100	99.561	Rhinopithecus_bieti
ENSSBOG00000028579	TSN	100	99.561	ENSRROG00000029954	TSN	100	99.561	Rhinopithecus_roxellana
ENSSBOG00000028579	TSN	100	96.053	ENSSHAG00000011707	TSN	100	96.053	Sarcophilus_harrisii
ENSSBOG00000028579	TSN	98	78.027	ENSSFOG00015020668	tsn	98	78.027	Scleropages_formosus
ENSSBOG00000028579	TSN	100	77.632	ENSSMAG00000005822	tsn	100	77.632	Scophthalmus_maximus
ENSSBOG00000028579	TSN	100	77.632	ENSSDUG00000011388	tsn	100	77.632	Seriola_dumerili
ENSSBOG00000028579	TSN	100	77.632	ENSSLDG00000008206	tsn	100	77.632	Seriola_lalandi_dorsalis
ENSSBOG00000028579	TSN	100	67.105	ENSSARG00000007193	-	100	67.105	Sorex_araneus
ENSSBOG00000028579	TSN	100	85.526	ENSSPUG00000017518	TSN	100	85.526	Sphenodon_punctatus
ENSSBOG00000028579	TSN	100	78.509	ENSSPAG00000009283	tsn	100	78.509	Stegastes_partitus
ENSSBOG00000028579	TSN	100	98.246	ENSSSCG00000015729	TSN	100	98.246	Sus_scrofa
ENSSBOG00000028579	TSN	100	84.279	ENSTGUG00000004445	TSN	100	84.279	Taeniopygia_guttata
ENSSBOG00000028579	TSN	97	77.376	ENSTRUG00000013691	tsn	98	77.376	Takifugu_rubripes
ENSSBOG00000028579	TSN	97	76.923	ENSTNIG00000015707	tsn	97	76.923	Tetraodon_nigroviridis
ENSSBOG00000028579	TSN	100	98.684	ENSTBEG00000015319	TSN	100	98.684	Tupaia_belangeri
ENSSBOG00000028579	TSN	100	99.123	ENSTTRG00000005854	TSN	100	99.123	Tursiops_truncatus
ENSSBOG00000028579	TSN	100	99.123	ENSUAMG00000021618	TSN	100	99.123	Ursus_americanus
ENSSBOG00000028579	TSN	100	97.807	ENSUMAG00000008516	TSN	100	97.807	Ursus_maritimus
ENSSBOG00000028579	TSN	78	61.290	ENSVPAG00000009874	-	100	72.868	Vicugna_pacos
ENSSBOG00000028579	TSN	94	98.086	ENSVVUG00000027555	TSN	99	99.029	Vulpes_vulpes
ENSSBOG00000028579	TSN	100	76.754	ENSXETG00000000838	tsn	100	76.754	Xenopus_tropicalis
ENSSBOG00000028579	TSN	97	73.913	ENSXCOG00000018514	tsn	95	74.194	Xiphophorus_couchianus
ENSSBOG00000028579	TSN	100	78.509	ENSXMAG00000022538	tsn	100	78.509	Xiphophorus_maculatus