EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000028626 (Gene tree)
Gene ID: 101046652
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 28942 bases
Position: chrJH378160.1:5504559-5533500
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024291	RTC	PF01137.21	9.2e-86	1	1
ENSSBOP00000024306	RTC	PF01137.21	1.1e-79	1	1
ENSSBOP00000024291	RTC_insert	PF05189.13	7.9e-25	1	1
ENSSBOP00000024306	RTC_insert	PF05189.13	8.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000041151	RTCA-201	5230	XM_003933259	ENSSBOP00000024291	366 (aa)	XP_003933308	A0A2K6TX94
ENSSBOT00000041166	RTCA-202	1140	-	ENSSBOP00000024306	379 (aa)	-	A0A2K6TXA9

Gene Model

Click here to download ENSSBOG00000028626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028626	RTCA	100	96.995	ENSG00000137996	RTCA	100	96.995	Homo_sapiens
ENSSBOG00000028626	RTCA	99	70.914	ENSAPOG00000001345	rtca	98	70.914	Acanthochromis_polyacanthus
ENSSBOG00000028626	RTCA	73	93.680	ENSAMEG00000008855	RTCA	100	93.680	Ailuropoda_melanoleuca
ENSSBOG00000028626	RTCA	99	71.191	ENSACIG00000019643	rtca	99	71.191	Amphilophus_citrinellus
ENSSBOG00000028626	RTCA	100	70.219	ENSAOCG00000014979	rtca	99	70.219	Amphiprion_ocellaris
ENSSBOG00000028626	RTCA	100	70.219	ENSAPEG00000006945	rtca	99	70.219	Amphiprion_percula
ENSSBOG00000028626	RTCA	96	71.225	ENSATEG00000006315	rtca	96	71.225	Anabas_testudineus
ENSSBOG00000028626	RTCA	96	79.661	ENSAPLG00000015430	RTCA	100	79.661	Anas_platyrhynchos
ENSSBOG00000028626	RTCA	100	98.634	ENSANAG00000025446	RTCA	100	98.634	Aotus_nancymaae
ENSSBOG00000028626	RTCA	100	69.399	ENSACLG00000020770	rtca	99	69.399	Astatotilapia_calliptera
ENSSBOG00000028626	RTCA	100	72.131	ENSAMXG00000043271	rtca	100	72.131	Astyanax_mexicanus
ENSSBOG00000028626	RTCA	100	93.989	ENSBTAG00000006321	RTCA	100	93.989	Bos_taurus
ENSSBOG00000028626	RTCA	100	98.634	ENSCJAG00000003398	RTCA	100	98.634	Callithrix_jacchus
ENSSBOG00000028626	RTCA	100	93.716	ENSCAFG00000020010	RTCA	68	93.716	Canis_familiaris
ENSSBOG00000028626	RTCA	100	93.716	ENSCAFG00020011528	RTCA	57	93.716	Canis_lupus_dingo
ENSSBOG00000028626	RTCA	100	93.716	ENSCHIG00000018937	RTCA	100	93.716	Capra_hircus
ENSSBOG00000028626	RTCA	100	92.350	ENSTSYG00000011305	RTCA	100	92.350	Carlito_syrichta
ENSSBOG00000028626	RTCA	100	97.814	ENSCCAG00000021844	RTCA	100	97.814	Cebus_capucinus
ENSSBOG00000028626	RTCA	100	96.042	ENSCATG00000019364	RTCA	100	97.087	Cercocebus_atys
ENSSBOG00000028626	RTCA	87	94.637	ENSCLAG00000006125	RTCA	100	94.637	Chinchilla_lanigera
ENSSBOG00000028626	RTCA	100	97.268	ENSCSAG00000001509	RTCA	100	97.268	Chlorocebus_sabaeus
ENSSBOG00000028626	RTCA	100	92.350	ENSCHOG00000005211	RTCA	100	92.350	Choloepus_hoffmanni
ENSSBOG00000028626	RTCA	100	82.514	ENSCPBG00000026658	RTCA	100	82.514	Chrysemys_picta_bellii
ENSSBOG00000028626	RTCA	98	55.125	ENSCING00000007875	-	98	55.125	Ciona_intestinalis
ENSSBOG00000028626	RTCA	98	53.333	ENSCSAVG00000007269	-	98	53.333	Ciona_savignyi
ENSSBOG00000028626	RTCA	100	96.995	ENSCANG00000040106	RTCA	100	96.995	Colobus_angolensis_palliatus
ENSSBOG00000028626	RTCA	73	91.078	ENSCGRG00001013163	Rtca	85	91.078	Cricetulus_griseus_chok1gshd
ENSSBOG00000028626	RTCA	99	68.219	ENSCSEG00000000530	rtca	98	68.219	Cynoglossus_semilaevis
ENSSBOG00000028626	RTCA	100	58.470	ENSCVAG00000021809	rtca	100	58.470	Cyprinodon_variegatus
ENSSBOG00000028626	RTCA	100	72.678	ENSDARG00000002215	rtca	100	72.678	Danio_rerio
ENSSBOG00000028626	RTCA	100	92.896	ENSDNOG00000000456	RTCA	100	92.896	Dasypus_novemcinctus
ENSSBOG00000028626	RTCA	100	91.803	ENSDORG00000005448	Rtca	100	91.803	Dipodomys_ordii
ENSSBOG00000028626	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSSBOG00000028626	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSSBOG00000028626	RTCA	100	93.443	ENSEASG00005015926	RTCA	100	93.443	Equus_asinus_asinus
ENSSBOG00000028626	RTCA	100	93.443	ENSECAG00000019831	RTCA	100	93.443	Equus_caballus
ENSSBOG00000028626	RTCA	91	81.503	ENSEEUG00000001165	RTCA	100	81.503	Erinaceus_europaeus
ENSSBOG00000028626	RTCA	99	71.191	ENSELUG00000003741	rtca	99	71.191	Esox_lucius
ENSSBOG00000028626	RTCA	100	93.716	ENSFCAG00000024460	RTCA	100	93.716	Felis_catus
ENSSBOG00000028626	RTCA	91	82.883	ENSFALG00000002443	RTCA	90	82.883	Ficedula_albicollis
ENSSBOG00000028626	RTCA	100	94.536	ENSFDAG00000012070	-	100	94.536	Fukomys_damarensis
ENSSBOG00000028626	RTCA	98	74.309	ENSFDAG00000016084	-	100	74.309	Fukomys_damarensis
ENSSBOG00000028626	RTCA	72	61.069	ENSFHEG00000002868	rtca	96	67.699	Fundulus_heteroclitus
ENSSBOG00000028626	RTCA	100	68.306	ENSGMOG00000013264	rtca	100	68.306	Gadus_morhua
ENSSBOG00000028626	RTCA	100	82.240	ENSGALG00000005277	RTCA	100	82.240	Gallus_gallus
ENSSBOG00000028626	RTCA	100	70.492	ENSGAFG00000011853	rtca	99	70.492	Gambusia_affinis
ENSSBOG00000028626	RTCA	100	69.126	ENSGACG00000013497	rtca	100	69.126	Gasterosteus_aculeatus
ENSSBOG00000028626	RTCA	80	83.276	ENSGAGG00000023306	RTCA	100	83.276	Gopherus_agassizii
ENSSBOG00000028626	RTCA	100	96.995	ENSGGOG00000009546	-	100	97.087	Gorilla_gorilla
ENSSBOG00000028626	RTCA	100	96.175	ENSGGOG00000044018	-	100	96.175	Gorilla_gorilla
ENSSBOG00000028626	RTCA	100	69.126	ENSHBUG00000002114	rtca	99	69.126	Haplochromis_burtoni
ENSSBOG00000028626	RTCA	100	93.169	ENSHGLG00000002617	RTCA	100	93.169	Heterocephalus_glaber_female
ENSSBOG00000028626	RTCA	100	93.169	ENSHGLG00100006056	RTCA	100	93.169	Heterocephalus_glaber_male
ENSSBOG00000028626	RTCA	100	63.934	ENSHCOG00000020628	rtca	89	63.934	Hippocampus_comes
ENSSBOG00000028626	RTCA	100	72.404	ENSIPUG00000024803	rtca	100	72.404	Ictalurus_punctatus
ENSSBOG00000028626	RTCA	100	86.339	ENSSTOG00000013528	-	100	86.339	Ictidomys_tridecemlineatus
ENSSBOG00000028626	RTCA	100	82.016	ENSSTOG00000033099	-	100	82.016	Ictidomys_tridecemlineatus
ENSSBOG00000028626	RTCA	100	65.301	ENSJJAG00000016178	Rtca	100	65.301	Jaculus_jaculus
ENSSBOG00000028626	RTCA	99	71.191	ENSKMAG00000006651	rtca	98	71.191	Kryptolebias_marmoratus
ENSSBOG00000028626	RTCA	99	69.252	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSSBOG00000028626	RTCA	88	68.847	ENSLBEG00000002448	-	99	68.847	Labrus_bergylta
ENSSBOG00000028626	RTCA	100	77.322	ENSLACG00000013666	RTCA	100	77.322	Latimeria_chalumnae
ENSSBOG00000028626	RTCA	100	71.858	ENSLOCG00000000093	rtca	99	71.858	Lepisosteus_oculatus
ENSSBOG00000028626	RTCA	100	92.077	ENSLAFG00000001473	RTCA	100	92.077	Loxodonta_africana
ENSSBOG00000028626	RTCA	100	97.268	ENSMFAG00000034132	RTCA	100	97.268	Macaca_fascicularis
ENSSBOG00000028626	RTCA	100	96.721	ENSMMUG00000019105	RTCA	100	96.721	Macaca_mulatta
ENSSBOG00000028626	RTCA	84	97.411	ENSMNEG00000037163	RTCA	100	97.411	Macaca_nemestrina
ENSSBOG00000028626	RTCA	100	79.508	ENSMLEG00000042151	RTCA	100	79.508	Mandrillus_leucophaeus
ENSSBOG00000028626	RTCA	100	72.678	ENSMAMG00000016536	rtca	100	72.678	Mastacembelus_armatus
ENSSBOG00000028626	RTCA	100	69.399	ENSMZEG00005017945	rtca	99	69.399	Maylandia_zebra
ENSSBOG00000028626	RTCA	87	81.191	ENSMGAG00000006892	RTCA	99	81.191	Meleagris_gallopavo
ENSSBOG00000028626	RTCA	100	91.257	ENSMAUG00000008488	Rtca	100	91.257	Mesocricetus_auratus
ENSSBOG00000028626	RTCA	84	95.146	ENSMICG00000008643	RTCA	100	95.146	Microcebus_murinus
ENSSBOG00000028626	RTCA	100	91.257	ENSMOCG00000016660	Rtca	100	91.257	Microtus_ochrogaster
ENSSBOG00000028626	RTCA	84	71.197	ENSMMOG00000007750	rtca	100	71.197	Mola_mola
ENSSBOG00000028626	RTCA	100	89.071	ENSMODG00000003557	RTCA	100	89.071	Monodelphis_domestica
ENSSBOG00000028626	RTCA	100	72.131	ENSMALG00000020844	rtca	100	72.131	Monopterus_albus
ENSSBOG00000028626	RTCA	100	90.710	MGP_CAROLIEiJ_G0025565	Rtca	100	91.549	Mus_caroli
ENSSBOG00000028626	RTCA	100	90.164	ENSMUSG00000000339	Rtca	100	91.549	Mus_musculus
ENSSBOG00000028626	RTCA	100	90.437	MGP_PahariEiJ_G0027011	Rtca	100	90.845	Mus_pahari
ENSSBOG00000028626	RTCA	100	90.984	MGP_SPRETEiJ_G0026515	Rtca	100	92.254	Mus_spretus
ENSSBOG00000028626	RTCA	100	94.262	ENSMPUG00000012119	RTCA	100	94.262	Mustela_putorius_furo
ENSSBOG00000028626	RTCA	100	86.921	ENSMLUG00000009922	RTCA	100	86.921	Myotis_lucifugus
ENSSBOG00000028626	RTCA	100	91.530	ENSNGAG00000011540	Rtca	99	91.530	Nannospalax_galili
ENSSBOG00000028626	RTCA	100	69.399	ENSNBRG00000003062	rtca	99	69.399	Neolamprologus_brichardi
ENSSBOG00000028626	RTCA	100	96.995	ENSNLEG00000031426	RTCA	100	96.995	Nomascus_leucogenys
ENSSBOG00000028626	RTCA	59	93.902	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSSBOG00000028626	RTCA	73	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSSBOG00000028626	RTCA	95	93.678	ENSODEG00000006990	RTCA	96	93.732	Octodon_degus
ENSSBOG00000028626	RTCA	100	69.399	ENSONIG00000007753	rtca	99	69.399	Oreochromis_niloticus
ENSSBOG00000028626	RTCA	87	86.120	ENSOANG00000012055	RTCA	98	86.120	Ornithorhynchus_anatinus
ENSSBOG00000028626	RTCA	100	94.262	ENSOCUG00000014247	RTCA	100	94.262	Oryctolagus_cuniculus
ENSSBOG00000028626	RTCA	100	69.672	ENSORLG00000013605	rtca	100	69.672	Oryzias_latipes
ENSSBOG00000028626	RTCA	100	69.672	ENSORLG00020001904	rtca	100	69.672	Oryzias_latipes_hni
ENSSBOG00000028626	RTCA	100	69.672	ENSORLG00015021064	rtca	100	69.672	Oryzias_latipes_hsok
ENSSBOG00000028626	RTCA	100	70.492	ENSOMEG00000000756	rtca	100	70.492	Oryzias_melastigma
ENSSBOG00000028626	RTCA	100	84.426	ENSOGAG00000005627	RTCA	100	84.426	Otolemur_garnettii
ENSSBOG00000028626	RTCA	87	93.082	ENSOARG00000018122	RTCA	100	93.082	Ovis_aries
ENSSBOG00000028626	RTCA	100	95.515	ENSPPAG00000035119	RTCA	100	96.764	Pan_paniscus
ENSSBOG00000028626	RTCA	100	93.716	ENSPPRG00000000350	RTCA	100	93.716	Panthera_pardus
ENSSBOG00000028626	RTCA	100	93.443	ENSPTIG00000012816	RTCA	100	93.443	Panthera_tigris_altaica
ENSSBOG00000028626	RTCA	100	95.515	ENSPTRG00000001004	RTCA	100	96.764	Pan_troglodytes
ENSSBOG00000028626	RTCA	100	96.448	ENSPANG00000000346	RTCA	100	96.448	Papio_anubis
ENSSBOG00000028626	RTCA	100	73.224	ENSPKIG00000001653	rtca	100	73.224	Paramormyrops_kingsleyae
ENSSBOG00000028626	RTCA	100	83.060	ENSPSIG00000011408	RTCA	100	83.060	Pelodiscus_sinensis
ENSSBOG00000028626	RTCA	100	90.437	ENSPEMG00000018582	Rtca	100	90.437	Peromyscus_maniculatus_bairdii
ENSSBOG00000028626	RTCA	100	56.948	ENSPMAG00000009110	rtca	100	56.948	Petromyzon_marinus
ENSSBOG00000028626	RTCA	100	89.617	ENSPCIG00000007684	RTCA	100	89.617	Phascolarctos_cinereus
ENSSBOG00000028626	RTCA	100	70.845	ENSPFOG00000004824	rtca	100	70.845	Poecilia_formosa
ENSSBOG00000028626	RTCA	100	71.038	ENSPLAG00000011753	rtca	99	71.038	Poecilia_latipinna
ENSSBOG00000028626	RTCA	100	71.038	ENSPMEG00000020469	rtca	99	71.038	Poecilia_mexicana
ENSSBOG00000028626	RTCA	100	71.858	ENSPREG00000001365	rtca	99	71.858	Poecilia_reticulata
ENSSBOG00000028626	RTCA	100	96.995	ENSPPYG00000001115	RTCA	100	96.995	Pongo_abelii
ENSSBOG00000028626	RTCA	100	89.617	ENSPCAG00000005076	RTCA	100	89.617	Procavia_capensis
ENSSBOG00000028626	RTCA	100	95.355	ENSPCOG00000005603	RTCA	100	95.355	Propithecus_coquereli
ENSSBOG00000028626	RTCA	100	91.029	ENSPVAG00000009478	RTCA	100	91.029	Pteropus_vampyrus
ENSSBOG00000028626	RTCA	100	69.399	ENSPNYG00000004722	rtca	99	69.399	Pundamilia_nyererei
ENSSBOG00000028626	RTCA	100	72.678	ENSPNAG00000022270	rtca	100	72.678	Pygocentrus_nattereri
ENSSBOG00000028626	RTCA	100	90.164	ENSRNOG00000014575	Rtca	100	90.164	Rattus_norvegicus
ENSSBOG00000028626	RTCA	100	95.515	ENSRBIG00000041180	RTCA	100	96.440	Rhinopithecus_bieti
ENSSBOG00000028626	RTCA	100	96.448	ENSRROG00000024929	RTCA	100	96.448	Rhinopithecus_roxellana
ENSSBOG00000028626	RTCA	100	89.071	ENSSHAG00000001758	RTCA	100	89.071	Sarcophilus_harrisii
ENSSBOG00000028626	RTCA	98	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSSBOG00000028626	RTCA	98	71.389	ENSSDUG00000015585	rtca	97	71.389	Seriola_dumerili
ENSSBOG00000028626	RTCA	96	71.510	ENSSLDG00000018985	rtca	95	71.510	Seriola_lalandi_dorsalis
ENSSBOG00000028626	RTCA	87	86.120	ENSSARG00000013993	RTCA	100	86.120	Sorex_araneus
ENSSBOG00000028626	RTCA	100	69.672	ENSSPAG00000011938	rtca	99	69.672	Stegastes_partitus
ENSSBOG00000028626	RTCA	100	93.989	ENSSSCG00000006865	RTCA	100	93.989	Sus_scrofa
ENSSBOG00000028626	RTCA	100	82.240	ENSTGUG00000005154	RTCA	100	82.240	Taeniopygia_guttata
ENSSBOG00000028626	RTCA	100	70.492	ENSTRUG00000008799	rtca	100	70.492	Takifugu_rubripes
ENSSBOG00000028626	RTCA	100	70.492	ENSTNIG00000004725	rtca	100	70.492	Tetraodon_nigroviridis
ENSSBOG00000028626	RTCA	60	87.273	ENSTBEG00000000943	RTCA	82	67.227	Tupaia_belangeri
ENSSBOG00000028626	RTCA	100	91.821	ENSTTRG00000015327	RTCA	100	91.821	Tursiops_truncatus
ENSSBOG00000028626	RTCA	94	91.254	ENSUAMG00000017265	RTCA	96	91.254	Ursus_americanus
ENSSBOG00000028626	RTCA	100	93.169	ENSUMAG00000007881	RTCA	100	93.169	Ursus_maritimus
ENSSBOG00000028626	RTCA	87	84.227	ENSVPAG00000001039	RTCA	87	83.636	Vicugna_pacos
ENSSBOG00000028626	RTCA	100	93.443	ENSVVUG00000022041	RTCA	68	93.443	Vulpes_vulpes
ENSSBOG00000028626	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSSBOG00000028626	RTCA	100	61.475	ENSXCOG00000008002	rtca	100	61.475	Xiphophorus_couchianus
ENSSBOG00000028626	RTCA	100	70.765	ENSXMAG00000005482	rtca	99	70.765	Xiphophorus_maculatus