EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000028738 (Gene tree)
Gene ID: 101038247
Gene Symbol: PPARGC1B
Alias: PERC|PGC1B
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 118287 bases
Position: chrJH378166.1:8570858-8689144
Accession: 30022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024511	RRM_1	PF00076.22	1.5e-09	1	1
ENSSBOP00000024508	RRM_1	PF00076.22	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000041371	PPARGC1B-202	3459	XM_003934006	ENSSBOP00000024511	982 (aa)	XP_003934055	A0A2K6TY33
ENSSBOT00000041368	PPARGC1B-201	3859	XM_003934005	ENSSBOP00000024508	1021 (aa)	XP_003934054	A0A2K6TXW2

Gene Model

Click here to download ENSSBOG00000028738's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq04931	Insulin resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028738's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028738	PPARGC1B	100	92.871	ENSG00000155846	PPARGC1B	100	92.773	Homo_sapiens
ENSSBOG00000028738	PPARGC1B	50	55.725	ENSAPOG00000018632	ppargc1a	68	55.725	Acanthochromis_polyacanthus
ENSSBOG00000028738	PPARGC1B	100	84.981	ENSAMEG00000005287	PPARGC1B	100	84.593	Ailuropoda_melanoleuca
ENSSBOG00000028738	PPARGC1B	50	55.725	ENSAOCG00000006754	ppargc1a	68	55.725	Amphiprion_ocellaris
ENSSBOG00000028738	PPARGC1B	50	55.725	ENSAPEG00000022574	ppargc1a	67	55.725	Amphiprion_percula
ENSSBOG00000028738	PPARGC1B	99	49.219	ENSAPLG00000009977	PPARGC1B	99	48.415	Anas_platyrhynchos
ENSSBOG00000028738	PPARGC1B	100	46.849	ENSACAG00000015737	PPARGC1B	99	46.412	Anolis_carolinensis
ENSSBOG00000028738	PPARGC1B	100	96.383	ENSANAG00000021830	PPARGC1B	100	96.383	Aotus_nancymaae
ENSSBOG00000028738	PPARGC1B	52	53.435	ENSAMXG00000002461	ppargc1a	55	53.435	Astyanax_mexicanus
ENSSBOG00000028738	PPARGC1B	100	82.672	ENSBTAG00000012943	PPARGC1B	100	82.575	Bos_taurus
ENSSBOG00000028738	PPARGC1B	100	95.308	ENSCJAG00000021113	PPARGC1B	100	94.340	Callithrix_jacchus
ENSSBOG00000028738	PPARGC1B	100	84.802	ENSCAFG00000018275	PPARGC1B	100	84.318	Canis_familiaris
ENSSBOG00000028738	PPARGC1B	100	84.608	ENSCAFG00020023524	PPARGC1B	100	84.105	Canis_lupus_dingo
ENSSBOG00000028738	PPARGC1B	50	51.538	ENSCHIG00000015991	PPARGC1A	54	52.083	Capra_hircus
ENSSBOG00000028738	PPARGC1B	100	82.478	ENSCHIG00000004409	PPARGC1B	100	82.285	Capra_hircus
ENSSBOG00000028738	PPARGC1B	97	77.685	ENSTSYG00000034354	PPARGC1B	100	77.894	Carlito_syrichta
ENSSBOG00000028738	PPARGC1B	97	79.668	ENSCAPG00000008859	PPARGC1B	99	79.564	Cavia_aperea
ENSSBOG00000028738	PPARGC1B	100	79.884	ENSCPOG00000001958	PPARGC1B	100	79.787	Cavia_porcellus
ENSSBOG00000028738	PPARGC1B	100	96.572	ENSCCAG00000026909	PPARGC1B	100	96.572	Cebus_capucinus
ENSSBOG00000028738	PPARGC1B	100	93.198	ENSCATG00000030402	PPARGC1B	100	93.096	Cercocebus_atys
ENSSBOG00000028738	PPARGC1B	100	78.433	ENSCLAG00000015452	PPARGC1B	100	78.820	Chinchilla_lanigera
ENSSBOG00000028738	PPARGC1B	98	93.287	ENSCSAG00000011792	PPARGC1B	100	93.387	Chlorocebus_sabaeus
ENSSBOG00000028738	PPARGC1B	63	86.905	ENSCHOG00000005517	-	68	86.905	Choloepus_hoffmanni
ENSSBOG00000028738	PPARGC1B	99	50.096	ENSCPBG00000007891	PPARGC1B	99	50.000	Chrysemys_picta_bellii
ENSSBOG00000028738	PPARGC1B	100	92.300	ENSCANG00000037487	PPARGC1B	100	92.398	Colobus_angolensis_palliatus
ENSSBOG00000028738	PPARGC1B	97	77.533	ENSCGRG00001017949	Ppargc1b	96	77.533	Cricetulus_griseus_chok1gshd
ENSSBOG00000028738	PPARGC1B	98	76.977	ENSCGRG00000008387	Ppargc1b	99	76.977	Cricetulus_griseus_crigri
ENSSBOG00000028738	PPARGC1B	50	53.435	ENSCSEG00000006884	ppargc1a	67	53.435	Cynoglossus_semilaevis
ENSSBOG00000028738	PPARGC1B	61	42.063	ENSDARG00000101569	ppargc1b	67	55.833	Danio_rerio
ENSSBOG00000028738	PPARGC1B	51	53.435	ENSDARG00000067829	ppargc1a	65	53.435	Danio_rerio
ENSSBOG00000028738	PPARGC1B	92	86.196	ENSDNOG00000005985	PPARGC1B	99	85.583	Dasypus_novemcinctus
ENSSBOG00000028738	PPARGC1B	100	79.737	ENSDORG00000012605	Ppargc1b	100	79.635	Dipodomys_ordii
ENSSBOG00000028738	PPARGC1B	100	83.984	ENSEASG00005002826	PPARGC1B	100	83.283	Equus_asinus_asinus
ENSSBOG00000028738	PPARGC1B	100	83.992	ENSECAG00000019769	PPARGC1B	83	83.703	Equus_caballus
ENSSBOG00000028738	PPARGC1B	50	49.153	ENSEEUG00000009219	PPARGC1A	55	52.083	Erinaceus_europaeus
ENSSBOG00000028738	PPARGC1B	79	75.983	ENSEEUG00000014903	PPARGC1B	86	76.856	Erinaceus_europaeus
ENSSBOG00000028738	PPARGC1B	79	34.625	ENSELUG00000014929	ppargc1b	79	35.593	Esox_lucius
ENSSBOG00000028738	PPARGC1B	97	48.390	ENSFALG00000008858	PPARGC1B	99	48.878	Ficedula_albicollis
ENSSBOG00000028738	PPARGC1B	97	79.067	ENSFDAG00000008719	PPARGC1B	99	79.266	Fukomys_damarensis
ENSSBOG00000028738	PPARGC1B	91	72.727	ENSGAGG00000012870	PPARGC1B	98	71.605	Gopherus_agassizii
ENSSBOG00000028738	PPARGC1B	99	90.204	ENSGGOG00000009505	PPARGC1B	100	92.385	Gorilla_gorilla
ENSSBOG00000028738	PPARGC1B	100	80.350	ENSHGLG00000005967	PPARGC1B	100	80.739	Heterocephalus_glaber_female
ENSSBOG00000028738	PPARGC1B	100	79.230	ENSHGLG00100010588	PPARGC1B	100	79.635	Heterocephalus_glaber_male
ENSSBOG00000028738	PPARGC1B	100	82.913	ENSSTOG00000024758	PPARGC1B	100	83.301	Ictidomys_tridecemlineatus
ENSSBOG00000028738	PPARGC1B	100	78.201	ENSJJAG00000018633	Ppargc1b	100	78.495	Jaculus_jaculus
ENSSBOG00000028738	PPARGC1B	54	45.263	ENSLBEG00000019562	ppargc1a	68	56.489	Labrus_bergylta
ENSSBOG00000028738	PPARGC1B	52	57.252	ENSLACG00000014054	PPARGC1A	55	57.252	Latimeria_chalumnae
ENSSBOG00000028738	PPARGC1B	83	44.720	ENSLOCG00000012195	ppargc1b	91	44.304	Lepisosteus_oculatus
ENSSBOG00000028738	PPARGC1B	52	55.725	ENSLOCG00000012350	ppargc1a	66	55.725	Lepisosteus_oculatus
ENSSBOG00000028738	PPARGC1B	98	80.910	ENSLAFG00000012339	PPARGC1B	99	80.407	Loxodonta_africana
ENSSBOG00000028738	PPARGC1B	100	93.457	ENSMFAG00000042269	PPARGC1B	100	93.359	Macaca_fascicularis
ENSSBOG00000028738	PPARGC1B	100	93.457	ENSMMUG00000004749	PPARGC1B	100	93.359	Macaca_mulatta
ENSSBOG00000028738	PPARGC1B	100	93.164	ENSMNEG00000034121	PPARGC1B	100	93.066	Macaca_nemestrina
ENSSBOG00000028738	PPARGC1B	97	93.287	ENSMLEG00000040973	PPARGC1B	100	93.186	Mandrillus_leucophaeus
ENSSBOG00000028738	PPARGC1B	82	68.548	ENSMGAG00000003134	PPARGC1B	85	69.291	Meleagris_gallopavo
ENSSBOG00000028738	PPARGC1B	100	77.148	ENSMAUG00000014191	Ppargc1b	100	77.051	Mesocricetus_auratus
ENSSBOG00000028738	PPARGC1B	100	85.029	ENSMICG00000002702	PPARGC1B	100	84.932	Microcebus_murinus
ENSSBOG00000028738	PPARGC1B	100	77.101	ENSMOCG00000014885	Ppargc1b	100	77.005	Microtus_ochrogaster
ENSSBOG00000028738	PPARGC1B	98	57.443	ENSMODG00000009891	PPARGC1B	99	57.659	Monodelphis_domestica
ENSSBOG00000028738	PPARGC1B	50	50.382	ENSMODG00000000549	PPARGC1A	53	51.042	Monodelphis_domestica
ENSSBOG00000028738	PPARGC1B	100	78.092	MGP_CAROLIEiJ_G0022323	Ppargc1b	100	78.092	Mus_caroli
ENSSBOG00000028738	PPARGC1B	100	77.854	ENSMUSG00000033871	Ppargc1b	100	77.854	Mus_musculus
ENSSBOG00000028738	PPARGC1B	50	49.618	ENSMUSG00000029167	Ppargc1a	52	52.174	Mus_musculus
ENSSBOG00000028738	PPARGC1B	100	76.692	MGP_PahariEiJ_G0019053	Ppargc1b	100	76.692	Mus_pahari
ENSSBOG00000028738	PPARGC1B	50	49.618	MGP_SPRETEiJ_G0028208	Ppargc1a	52	52.174	Mus_spretus
ENSSBOG00000028738	PPARGC1B	100	77.637	MGP_SPRETEiJ_G0023235	Ppargc1b	100	77.637	Mus_spretus
ENSSBOG00000028738	PPARGC1B	100	84.981	ENSMPUG00000014245	PPARGC1B	100	84.593	Mustela_putorius_furo
ENSSBOG00000028738	PPARGC1B	50	49.153	ENSMLUG00000016307	PPARGC1A	53	52.083	Myotis_lucifugus
ENSSBOG00000028738	PPARGC1B	92	76.939	ENSMLUG00000013169	PPARGC1B	100	76.834	Myotis_lucifugus
ENSSBOG00000028738	PPARGC1B	99	78.006	ENSNGAG00000016998	Ppargc1b	99	77.713	Nannospalax_galili
ENSSBOG00000028738	PPARGC1B	100	89.941	ENSNLEG00000010193	PPARGC1B	100	89.844	Nomascus_leucogenys
ENSSBOG00000028738	PPARGC1B	97	76.553	ENSOPRG00000010017	PPARGC1B	99	76.353	Ochotona_princeps
ENSSBOG00000028738	PPARGC1B	100	79.838	ENSODEG00000004901	PPARGC1B	100	79.939	Octodon_degus
ENSSBOG00000028738	PPARGC1B	97	54.309	ENSOANG00000009368	PPARGC1B	99	54.400	Ornithorhynchus_anatinus
ENSSBOG00000028738	PPARGC1B	98	78.557	ENSOCUG00000013833	PPARGC1B	100	78.557	Oryctolagus_cuniculus
ENSSBOG00000028738	PPARGC1B	50	50.382	ENSOGAG00000014559	PPARGC1A	53	52.083	Otolemur_garnettii
ENSSBOG00000028738	PPARGC1B	98	80.616	ENSOGAG00000015983	PPARGC1B	99	79.337	Otolemur_garnettii
ENSSBOG00000028738	PPARGC1B	98	80.392	ENSOARG00000005658	PPARGC1B	98	80.392	Ovis_aries
ENSSBOG00000028738	PPARGC1B	99	91.224	ENSPPAG00000035226	PPARGC1B	100	92.485	Pan_paniscus
ENSSBOG00000028738	PPARGC1B	100	85.825	ENSPPRG00000004608	PPARGC1B	100	85.631	Panthera_pardus
ENSSBOG00000028738	PPARGC1B	100	83.624	ENSPTIG00000007391	PPARGC1B	100	83.624	Panthera_tigris_altaica
ENSSBOG00000028738	PPARGC1B	100	92.773	ENSPTRG00000017403	PPARGC1B	100	92.676	Pan_troglodytes
ENSSBOG00000028738	PPARGC1B	100	93.359	ENSPANG00000009512	PPARGC1B	100	93.262	Papio_anubis
ENSSBOG00000028738	PPARGC1B	99	51.194	ENSPSIG00000008358	PPARGC1B	99	50.237	Pelodiscus_sinensis
ENSSBOG00000028738	PPARGC1B	100	78.146	ENSPEMG00000018822	Ppargc1b	100	78.146	Peromyscus_maniculatus_bairdii
ENSSBOG00000028738	PPARGC1B	90	56.663	ENSPCIG00000020102	PPARGC1B	99	56.558	Phascolarctos_cinereus
ENSSBOG00000028738	PPARGC1B	50	50.382	ENSPCIG00000015835	PPARGC1A	53	51.042	Phascolarctos_cinereus
ENSSBOG00000028738	PPARGC1B	100	93.164	ENSPPYG00000015938	PPARGC1B	100	93.066	Pongo_abelii
ENSSBOG00000028738	PPARGC1B	72	82.136	ENSPCAG00000012171	PPARGC1B	74	88.462	Procavia_capensis
ENSSBOG00000028738	PPARGC1B	100	86.974	ENSPCOG00000024059	PPARGC1B	100	86.778	Propithecus_coquereli
ENSSBOG00000028738	PPARGC1B	100	83.041	ENSPVAG00000001308	PPARGC1B	100	82.846	Pteropus_vampyrus
ENSSBOG00000028738	PPARGC1B	65	54.167	ENSPNAG00000023871	ppargc1b	76	54.167	Pygocentrus_nattereri
ENSSBOG00000028738	PPARGC1B	52	53.435	ENSPNAG00000010393	ppargc1a	60	53.435	Pygocentrus_nattereri
ENSSBOG00000028738	PPARGC1B	100	77.713	ENSRNOG00000017503	Ppargc1b	100	77.713	Rattus_norvegicus
ENSSBOG00000028738	PPARGC1B	100	92.098	ENSRBIG00000036724	PPARGC1B	100	92.195	Rhinopithecus_bieti
ENSSBOG00000028738	PPARGC1B	97	92.052	ENSRROG00000029594	PPARGC1B	97	92.192	Rhinopithecus_roxellana
ENSSBOG00000028738	PPARGC1B	99	58.293	ENSSHAG00000016400	PPARGC1B	99	58.389	Sarcophilus_harrisii
ENSSBOG00000028738	PPARGC1B	50	50.382	ENSSHAG00000010033	PPARGC1A	50	52.128	Sarcophilus_harrisii
ENSSBOG00000028738	PPARGC1B	62	37.255	ENSSFOG00015018522	ppargc1a	57	52.041	Scleropages_formosus
ENSSBOG00000028738	PPARGC1B	50	54.962	ENSSMAG00000011571	ppargc1a	65	54.962	Scophthalmus_maximus
ENSSBOG00000028738	PPARGC1B	99	50.048	ENSSPUG00000019271	PPARGC1B	99	48.505	Sphenodon_punctatus
ENSSBOG00000028738	PPARGC1B	50	55.725	ENSSPAG00000023514	ppargc1a	67	55.725	Stegastes_partitus
ENSSBOG00000028738	PPARGC1B	100	75.865	ENSSSCG00000014437	PPARGC1B	100	76.154	Sus_scrofa
ENSSBOG00000028738	PPARGC1B	97	48.730	ENSTGUG00000000232	PPARGC1B	100	49.308	Taeniopygia_guttata
ENSSBOG00000028738	PPARGC1B	99	83.680	ENSTTRG00000008430	PPARGC1B	100	83.383	Tursiops_truncatus
ENSSBOG00000028738	PPARGC1B	99	82.993	ENSUMAG00000005361	PPARGC1B	99	82.507	Ursus_maritimus
ENSSBOG00000028738	PPARGC1B	100	84.802	ENSVVUG00000014358	PPARGC1B	100	84.318	Vulpes_vulpes
ENSSBOG00000028738	PPARGC1B	88	45.439	ENSXETG00000012711	ppargc1b	96	45.170	Xenopus_tropicalis