EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000028825 (Gene tree)
Gene ID: 101028585
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 93600 bases
Position: chrJH378118.1:23101770-23195369
Accession: 16785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024755	PIN_4	PF13638.6	2.5e-27	1	1
ENSSBOP00000024742	PIN_4	PF13638.6	2.5e-27	1	1
ENSSBOP00000024767	PIN_4	PF13638.6	2.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000041616	SWT1-202	4152	XM_010336023	ENSSBOP00000024755	883 (aa)	XP_010334325	A0A2K6TYP2
ENSSBOT00000041603	SWT1-201	4212	XM_010336019	ENSSBOP00000024742	903 (aa)	XP_010334321	A0A2K6TYL4
ENSSBOT00000041628	SWT1-203	4177	XM_010336022	ENSSBOP00000024767	903 (aa)	XP_010334324	A0A2K6TYL4

Gene Model

Click here to download ENSSBOG00000028825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028825	SWT1	100	91.251	ENSG00000116668	SWT1	100	91.251	Homo_sapiens
ENSSBOG00000028825	SWT1	61	33.563	ENSAPOG00000014897	-	58	33.390	Acanthochromis_polyacanthus
ENSSBOG00000028825	SWT1	99	80.044	ENSAMEG00000013585	SWT1	99	80.044	Ailuropoda_melanoleuca
ENSSBOG00000028825	SWT1	61	34.251	ENSAOCG00000013932	swt1	58	34.251	Amphiprion_ocellaris
ENSSBOG00000028825	SWT1	61	34.079	ENSAPEG00000009613	-	58	34.079	Amphiprion_percula
ENSSBOG00000028825	SWT1	61	35.529	ENSATEG00000018946	swt1	58	35.424	Anabas_testudineus
ENSSBOG00000028825	SWT1	81	48.787	ENSAPLG00000008607	SWT1	100	48.922	Anas_platyrhynchos
ENSSBOG00000028825	SWT1	63	47.432	ENSACAG00000002276	SWT1	67	47.170	Anolis_carolinensis
ENSSBOG00000028825	SWT1	100	95.460	ENSANAG00000027068	SWT1	100	95.460	Aotus_nancymaae
ENSSBOG00000028825	SWT1	59	33.570	ENSACLG00000009742	swt1	68	32.807	Astatotilapia_calliptera
ENSSBOG00000028825	SWT1	63	39.003	ENSAMXG00000010971	swt1	59	39.003	Astyanax_mexicanus
ENSSBOG00000028825	SWT1	72	72.936	ENSBTAG00000004492	SWT1	99	77.405	Bos_taurus
ENSSBOG00000028825	SWT1	99	94.013	ENSCJAG00000005544	SWT1	99	94.013	Callithrix_jacchus
ENSSBOG00000028825	SWT1	99	79.208	ENSCAFG00000013543	SWT1	99	78.637	Canis_familiaris
ENSSBOG00000028825	SWT1	99	78.228	ENSCAFG00020015648	SWT1	99	80.774	Canis_lupus_dingo
ENSSBOG00000028825	SWT1	93	78.960	ENSCHIG00000023511	SWT1	99	85.299	Capra_hircus
ENSSBOG00000028825	SWT1	99	83.370	ENSTSYG00000010470	SWT1	99	83.370	Carlito_syrichta
ENSSBOG00000028825	SWT1	93	75.296	ENSCPOG00000014251	SWT1	100	75.296	Cavia_porcellus
ENSSBOG00000028825	SWT1	100	97.121	ENSCCAG00000033926	SWT1	100	97.121	Cebus_capucinus
ENSSBOG00000028825	SWT1	100	91.280	ENSCATG00000042210	SWT1	99	93.482	Cercocebus_atys
ENSSBOG00000028825	SWT1	99	75.553	ENSCLAG00000013959	SWT1	99	75.442	Chinchilla_lanigera
ENSSBOG00000028825	SWT1	100	91.060	ENSCSAG00000012895	SWT1	100	91.060	Chlorocebus_sabaeus
ENSSBOG00000028825	SWT1	61	86.164	ENSCHOG00000002211	-	64	86.164	Choloepus_hoffmanni
ENSSBOG00000028825	SWT1	92	47.271	ENSCPBG00000015691	SWT1	94	47.387	Chrysemys_picta_bellii
ENSSBOG00000028825	SWT1	100	90.698	ENSCANG00000032207	SWT1	99	92.931	Colobus_angolensis_palliatus
ENSSBOG00000028825	SWT1	99	73.098	ENSCGRG00001022955	Swt1	98	73.098	Cricetulus_griseus_chok1gshd
ENSSBOG00000028825	SWT1	99	73.098	ENSCGRG00000010224	Swt1	99	73.098	Cricetulus_griseus_crigri
ENSSBOG00000028825	SWT1	61	33.959	ENSCSEG00000017352	swt1	75	33.446	Cynoglossus_semilaevis
ENSSBOG00000028825	SWT1	72	35.556	ENSDARG00000094010	swt1	69	35.182	Danio_rerio
ENSSBOG00000028825	SWT1	90	74.940	ENSDNOG00000005254	SWT1	100	74.700	Dasypus_novemcinctus
ENSSBOG00000028825	SWT1	89	80.370	ENSDORG00000010531	Swt1	95	80.370	Dipodomys_ordii
ENSSBOG00000028825	SWT1	91	77.738	ENSEASG00005005530	SWT1	97	78.920	Equus_asinus_asinus
ENSSBOG00000028825	SWT1	92	79.112	ENSECAG00000012085	SWT1	99	79.112	Equus_caballus
ENSSBOG00000028825	SWT1	85	87.059	ENSEEUG00000003664	SWT1	85	87.059	Erinaceus_europaeus
ENSSBOG00000028825	SWT1	62	36.789	ENSELUG00000020565	swt1	58	37.209	Esox_lucius
ENSSBOG00000028825	SWT1	99	79.075	ENSFCAG00000011286	SWT1	99	79.075	Felis_catus
ENSSBOG00000028825	SWT1	82	43.734	ENSFALG00000003206	SWT1	88	44.129	Ficedula_albicollis
ENSSBOG00000028825	SWT1	99	75.358	ENSFDAG00000007569	SWT1	99	75.028	Fukomys_damarensis
ENSSBOG00000028825	SWT1	86	44.595	ENSGALG00000034230	SWT1	93	44.595	Gallus_gallus
ENSSBOG00000028825	SWT1	75	31.233	ENSGAFG00000007803	-	72	31.737	Gambusia_affinis
ENSSBOG00000028825	SWT1	88	47.815	ENSGAGG00000025050	SWT1	99	57.513	Gopherus_agassizii
ENSSBOG00000028825	SWT1	59	92.762	ENSGGOG00000041167	-	96	92.762	Gorilla_gorilla
ENSSBOG00000028825	SWT1	62	33.619	ENSHBUG00000006188	swt1	68	32.881	Haplochromis_burtoni
ENSSBOG00000028825	SWT1	93	78.885	ENSHGLG00000006542	SWT1	97	78.885	Heterocephalus_glaber_female
ENSSBOG00000028825	SWT1	99	77.333	ENSHGLG00100014408	SWT1	99	76.889	Heterocephalus_glaber_male
ENSSBOG00000028825	SWT1	99	76.923	ENSSTOG00000010356	SWT1	99	77.473	Ictidomys_tridecemlineatus
ENSSBOG00000028825	SWT1	99	69.570	ENSJJAG00000015927	Swt1	99	69.570	Jaculus_jaculus
ENSSBOG00000028825	SWT1	61	34.828	ENSKMAG00000012533	swt1	59	34.518	Kryptolebias_marmoratus
ENSSBOG00000028825	SWT1	61	35.294	ENSLBEG00000020663	-	59	35.117	Labrus_bergylta
ENSSBOG00000028825	SWT1	75	46.991	ENSLACG00000009194	SWT1	99	46.991	Latimeria_chalumnae
ENSSBOG00000028825	SWT1	73	37.787	ENSLOCG00000001749	swt1	98	42.115	Lepisosteus_oculatus
ENSSBOG00000028825	SWT1	64	86.371	ENSLAFG00000004346	-	99	86.371	Loxodonta_africana
ENSSBOG00000028825	SWT1	100	90.839	ENSMFAG00000031793	SWT1	99	93.287	Macaca_fascicularis
ENSSBOG00000028825	SWT1	100	88.184	ENSMMUG00000013882	SWT1	99	89.446	Macaca_mulatta
ENSSBOG00000028825	SWT1	100	90.839	ENSMNEG00000035502	SWT1	99	93.115	Macaca_nemestrina
ENSSBOG00000028825	SWT1	100	91.473	ENSMLEG00000038692	SWT1	99	93.482	Mandrillus_leucophaeus
ENSSBOG00000028825	SWT1	62	33.619	ENSMZEG00005018489	swt1	68	32.881	Maylandia_zebra
ENSSBOG00000028825	SWT1	63	52.437	ENSMGAG00000000973	SWT1	100	52.437	Meleagris_gallopavo
ENSSBOG00000028825	SWT1	99	66.262	ENSMAUG00000007996	Swt1	97	66.262	Mesocricetus_auratus
ENSSBOG00000028825	SWT1	99	84.123	ENSMICG00000014975	SWT1	99	84.344	Microcebus_murinus
ENSSBOG00000028825	SWT1	99	71.665	ENSMOCG00000009776	Swt1	98	71.665	Microtus_ochrogaster
ENSSBOG00000028825	SWT1	99	59.307	ENSMODG00000007472	SWT1	99	59.091	Monodelphis_domestica
ENSSBOG00000028825	SWT1	61	35.986	ENSMALG00000019308	swt1	58	35.986	Monopterus_albus
ENSSBOG00000028825	SWT1	99	69.239	MGP_CAROLIEiJ_G0014692	Swt1	99	70.232	Mus_caroli
ENSSBOG00000028825	SWT1	99	68.578	ENSMUSG00000052748	Swt1	98	69.570	Mus_musculus
ENSSBOG00000028825	SWT1	99	70.705	MGP_PahariEiJ_G0027928	Swt1	98	71.696	Mus_pahari
ENSSBOG00000028825	SWT1	99	69.350	MGP_SPRETEiJ_G0015499	Swt1	98	70.342	Mus_spretus
ENSSBOG00000028825	SWT1	99	78.721	ENSMPUG00000011913	SWT1	99	78.721	Mustela_putorius_furo
ENSSBOG00000028825	SWT1	99	76.796	ENSMLUG00000001142	SWT1	97	76.796	Myotis_lucifugus
ENSSBOG00000028825	SWT1	99	75.991	ENSNGAG00000021080	Swt1	98	75.991	Nannospalax_galili
ENSSBOG00000028825	SWT1	100	90.033	ENSNLEG00000018031	SWT1	100	90.033	Nomascus_leucogenys
ENSSBOG00000028825	SWT1	99	45.554	ENSMEUG00000000236	-	99	46.103	Notamacropus_eugenii
ENSSBOG00000028825	SWT1	89	69.194	ENSOPRG00000000692	SWT1	88	69.194	Ochotona_princeps
ENSSBOG00000028825	SWT1	59	35.955	ENSONIG00000009994	swt1	99	35.926	Oreochromis_niloticus
ENSSBOG00000028825	SWT1	75	61.192	ENSOANG00000001013	-	97	56.980	Ornithorhynchus_anatinus
ENSSBOG00000028825	SWT1	99	69.934	ENSOCUG00000004901	SWT1	99	69.934	Oryctolagus_cuniculus
ENSSBOG00000028825	SWT1	73	31.294	ENSORLG00000009682	swt1	68	31.384	Oryzias_latipes
ENSSBOG00000028825	SWT1	63	32.901	ENSORLG00020011654	swt1	62	32.901	Oryzias_latipes_hni
ENSSBOG00000028825	SWT1	73	31.526	ENSORLG00015007734	swt1	68	31.526	Oryzias_latipes_hsok
ENSSBOG00000028825	SWT1	72	32.899	ENSOMEG00000006607	swt1	66	33.086	Oryzias_melastigma
ENSSBOG00000028825	SWT1	99	80.816	ENSOGAG00000016195	SWT1	99	80.595	Otolemur_garnettii
ENSSBOG00000028825	SWT1	99	79.295	ENSOARG00000004156	SWT1	98	79.295	Ovis_aries
ENSSBOG00000028825	SWT1	100	90.919	ENSPPAG00000021400	SWT1	100	90.919	Pan_paniscus
ENSSBOG00000028825	SWT1	99	79.405	ENSPPRG00000023754	SWT1	99	79.405	Panthera_pardus
ENSSBOG00000028825	SWT1	99	79.295	ENSPTIG00000021889	SWT1	99	79.295	Panthera_tigris_altaica
ENSSBOG00000028825	SWT1	100	90.919	ENSPTRG00000001777	SWT1	100	90.919	Pan_troglodytes
ENSSBOG00000028825	SWT1	100	90.839	ENSPANG00000005099	SWT1	99	93.310	Papio_anubis
ENSSBOG00000028825	SWT1	65	36.177	ENSPKIG00000005979	swt1	61	36.177	Paramormyrops_kingsleyae
ENSSBOG00000028825	SWT1	95	45.989	ENSPSIG00000008961	SWT1	94	46.216	Pelodiscus_sinensis
ENSSBOG00000028825	SWT1	99	72.797	ENSPEMG00000008208	Swt1	98	72.797	Peromyscus_maniculatus_bairdii
ENSSBOG00000028825	SWT1	99	59.279	ENSPCIG00000002443	SWT1	99	73.846	Phascolarctos_cinereus
ENSSBOG00000028825	SWT1	74	30.833	ENSPFOG00000010988	-	72	30.833	Poecilia_formosa
ENSSBOG00000028825	SWT1	74	30.972	ENSPLAG00000022908	-	72	30.972	Poecilia_latipinna
ENSSBOG00000028825	SWT1	74	30.833	ENSPMEG00000006943	-	72	30.833	Poecilia_mexicana
ENSSBOG00000028825	SWT1	100	90.919	ENSPPYG00000000415	SWT1	100	90.919	Pongo_abelii
ENSSBOG00000028825	SWT1	99	65.749	ENSPCAG00000008337	SWT1	99	65.749	Procavia_capensis
ENSSBOG00000028825	SWT1	70	87.912	ENSPCOG00000018195	-	93	87.912	Propithecus_coquereli
ENSSBOG00000028825	SWT1	79	79.412	ENSPVAG00000005968	SWT1	80	79.668	Pteropus_vampyrus
ENSSBOG00000028825	SWT1	62	33.619	ENSPNYG00000012934	swt1	68	32.881	Pundamilia_nyererei
ENSSBOG00000028825	SWT1	63	37.587	ENSPNAG00000017795	swt1	59	38.210	Pygocentrus_nattereri
ENSSBOG00000028825	SWT1	99	71.789	ENSRNOG00000032258	Swt1	98	72.777	Rattus_norvegicus
ENSSBOG00000028825	SWT1	100	88.040	ENSRBIG00000040630	SWT1	99	90.000	Rhinopithecus_bieti
ENSSBOG00000028825	SWT1	70	90.823	ENSRROG00000028596	SWT1	100	90.823	Rhinopithecus_roxellana
ENSSBOG00000028825	SWT1	99	59.979	ENSSHAG00000009241	SWT1	99	59.871	Sarcophilus_harrisii
ENSSBOG00000028825	SWT1	64	37.565	ENSSFOG00015004895	swt1	59	37.311	Scleropages_formosus
ENSSBOG00000028825	SWT1	61	34.483	ENSSDUG00000012345	swt1	58	34.662	Seriola_dumerili
ENSSBOG00000028825	SWT1	61	34.483	ENSSLDG00000003821	swt1	58	34.662	Seriola_lalandi_dorsalis
ENSSBOG00000028825	SWT1	57	49.807	ENSSARG00000011524	-	99	49.807	Sorex_araneus
ENSSBOG00000028825	SWT1	78	49.313	ENSSPUG00000003899	SWT1	81	49.183	Sphenodon_punctatus
ENSSBOG00000028825	SWT1	61	33.048	ENSSPAG00000001030	swt1	58	33.219	Stegastes_partitus
ENSSBOG00000028825	SWT1	94	83.547	ENSSSCG00000015569	SWT1	99	82.048	Sus_scrofa
ENSSBOG00000028825	SWT1	62	53.763	ENSTGUG00000003718	-	100	53.763	Taeniopygia_guttata
ENSSBOG00000028825	SWT1	63	34.175	ENSTRUG00000006420	swt1	64	34.175	Takifugu_rubripes
ENSSBOG00000028825	SWT1	54	88.525	ENSTBEG00000016891	-	54	88.525	Tupaia_belangeri
ENSSBOG00000028825	SWT1	99	77.753	ENSTTRG00000005914	SWT1	99	77.753	Tursiops_truncatus
ENSSBOG00000028825	SWT1	99	78.501	ENSUAMG00000020937	SWT1	99	81.741	Ursus_americanus
ENSSBOG00000028825	SWT1	99	79.493	ENSUMAG00000021918	SWT1	99	79.493	Ursus_maritimus
ENSSBOG00000028825	SWT1	92	86.019	ENSVPAG00000011855	SWT1	92	86.019	Vicugna_pacos
ENSSBOG00000028825	SWT1	99	79.934	ENSVVUG00000009182	SWT1	99	79.603	Vulpes_vulpes
ENSSBOG00000028825	SWT1	75	31.776	ENSXMAG00000023472	-	72	32.289	Xiphophorus_maculatus