EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000028861 (Gene tree)
Gene ID: 101041404
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Plus strand
Length: 12665 bases
Position: chrJH378255.1:1716620-1729284
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000024827	zf-CCCH	PF00642.24	4.4e-08	1	1
ENSSBOP00000024792	zf-CCCH	PF00642.24	4.4e-08	1	1
ENSSBOP00000024826	zf-CCCH	PF00642.24	4.6e-08	1	1
ENSSBOP00000024792	TRM	PF02005.16	9.3e-148	1	1
ENSSBOP00000024806	TRM	PF02005.16	9.4e-148	1	1
ENSSBOP00000024826	TRM	PF02005.16	1e-147	1	1
ENSSBOP00000024827	TRM	PF02005.16	3.8e-139	1	1
ENSSBOP00000024827	Met_10	PF02475.16	9e-06	1	1
ENSSBOP00000024792	Met_10	PF02475.16	9.1e-06	1	1
ENSSBOP00000024806	Met_10	PF02475.16	9.2e-06	1	1
ENSSBOP00000024826	Met_10	PF02475.16	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000041668	TRMT1-202	2444	-	ENSSBOP00000024806	623 (aa)	-	A0A2K6TYX5
ENSSBOT00000041689	TRMT1-204	1845	-	ENSSBOP00000024827	614 (aa)	-	A0A2K6TYS3
ENSSBOT00000041688	TRMT1-203	1932	-	ENSSBOP00000024826	643 (aa)	-	A0A2K6TYZ5
ENSSBOT00000041654	TRMT1-201	2428	XM_010329455	ENSSBOP00000024792	621 (aa)	XP_010327757	A0A2K6TYN8

Gene Model

Click here to download ENSSBOG00000028861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000028861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000028861	TRMT1	98	91.148	ENSG00000104907	TRMT1	100	91.099	Homo_sapiens
ENSSBOG00000028861	TRMT1	99	84.117	ENSAMEG00000012598	TRMT1	97	82.055	Ailuropoda_melanoleuca
ENSSBOG00000028861	TRMT1	92	57.592	ENSACIG00000018680	trmt1	88	57.592	Amphilophus_citrinellus
ENSSBOG00000028861	TRMT1	93	63.715	ENSAOCG00000006781	trmt1	86	63.715	Amphiprion_ocellaris
ENSSBOG00000028861	TRMT1	93	63.715	ENSAPEG00000007712	trmt1	86	63.715	Amphiprion_percula
ENSSBOG00000028861	TRMT1	92	65.794	ENSATEG00000001872	trmt1	84	65.794	Anabas_testudineus
ENSSBOG00000028861	TRMT1	93	65.749	ENSACAG00000003825	TRMT1	97	64.238	Anolis_carolinensis
ENSSBOG00000028861	TRMT1	100	95.666	ENSANAG00000023016	TRMT1	100	95.666	Aotus_nancymaae
ENSSBOG00000028861	TRMT1	92	62.522	ENSACLG00000010073	trmt1	92	62.522	Astatotilapia_calliptera
ENSSBOG00000028861	TRMT1	92	65.225	ENSAMXG00000012026	trmt1	85	65.225	Astyanax_mexicanus
ENSSBOG00000028861	TRMT1	98	84.967	ENSBTAG00000019325	TRMT1	89	84.102	Bos_taurus
ENSSBOG00000028861	TRMT1	85	39.889	WBGene00006613	trm-1	96	39.889	Caenorhabditis_elegans
ENSSBOG00000028861	TRMT1	99	92.765	ENSCJAG00000004566	TRMT1	97	92.703	Callithrix_jacchus
ENSSBOG00000028861	TRMT1	99	85.737	ENSCAFG00000017070	TRMT1	100	84.144	Canis_familiaris
ENSSBOG00000028861	TRMT1	99	85.179	ENSCAFG00020005397	TRMT1	98	84.109	Canis_lupus_dingo
ENSSBOG00000028861	TRMT1	98	84.992	ENSCHIG00000013569	TRMT1	98	82.083	Capra_hircus
ENSSBOG00000028861	TRMT1	98	82.063	ENSTSYG00000003207	TRMT1	99	80.581	Carlito_syrichta
ENSSBOG00000028861	TRMT1	91	77.032	ENSCAPG00000003355	TRMT1	99	77.032	Cavia_aperea
ENSSBOG00000028861	TRMT1	99	80.484	ENSCPOG00000011754	TRMT1	94	81.059	Cavia_porcellus
ENSSBOG00000028861	TRMT1	100	96.618	ENSCCAG00000022263	TRMT1	100	96.618	Cebus_capucinus
ENSSBOG00000028861	TRMT1	99	90.894	ENSCATG00000039850	TRMT1	98	88.018	Cercocebus_atys
ENSSBOG00000028861	TRMT1	88	74.841	ENSCATG00000038220	-	99	73.320	Cercocebus_atys
ENSSBOG00000028861	TRMT1	98	84.098	ENSCLAG00000015295	TRMT1	96	80.583	Chinchilla_lanigera
ENSSBOG00000028861	TRMT1	81	90.577	ENSCSAG00000006500	TRMT1	98	90.577	Chlorocebus_sabaeus
ENSSBOG00000028861	TRMT1	95	66.214	ENSCPBG00000023866	TRMT1	94	63.780	Chrysemys_picta_bellii
ENSSBOG00000028861	TRMT1	88	45.293	ENSCING00000002884	-	96	45.293	Ciona_intestinalis
ENSSBOG00000028861	TRMT1	88	46.029	ENSCSAVG00000010927	-	100	46.097	Ciona_savignyi
ENSSBOG00000028861	TRMT1	99	74.068	ENSCANG00000040631	TRMT1	100	72.104	Colobus_angolensis_palliatus
ENSSBOG00000028861	TRMT1	98	70.346	ENSCANG00000031650	-	98	68.594	Colobus_angolensis_palliatus
ENSSBOG00000028861	TRMT1	98	82.838	ENSCGRG00001022594	Trmt1	94	81.981	Cricetulus_griseus_chok1gshd
ENSSBOG00000028861	TRMT1	98	82.838	ENSCGRG00000017732	Trmt1	94	81.636	Cricetulus_griseus_crigri
ENSSBOG00000028861	TRMT1	92	64.510	ENSCSEG00000001643	trmt1	84	66.667	Cynoglossus_semilaevis
ENSSBOG00000028861	TRMT1	93	64.676	ENSCVAG00000011886	trmt1	87	64.676	Cyprinodon_variegatus
ENSSBOG00000028861	TRMT1	92	64.138	ENSDARG00000010978	trmt1	85	64.310	Danio_rerio
ENSSBOG00000028861	TRMT1	87	59.484	ENSDNOG00000048240	-	95	58.036	Dasypus_novemcinctus
ENSSBOG00000028861	TRMT1	98	83.306	ENSDORG00000014298	Trmt1	99	79.745	Dipodomys_ordii
ENSSBOG00000028861	TRMT1	84	46.792	FBgn0032430	CG6388	89	46.792	Drosophila_melanogaster
ENSSBOG00000028861	TRMT1	56	79.505	ENSETEG00000015483	-	54	79.505	Echinops_telfairi
ENSSBOG00000028861	TRMT1	96	48.671	ENSEBUG00000003449	trmt1	86	48.505	Eptatretus_burgeri
ENSSBOG00000028861	TRMT1	98	83.797	ENSEASG00005004050	TRMT1	100	81.476	Equus_asinus_asinus
ENSSBOG00000028861	TRMT1	98	83.961	ENSECAG00000016149	TRMT1	100	81.476	Equus_caballus
ENSSBOG00000028861	TRMT1	64	67.003	ENSEEUG00000014102	-	100	67.003	Erinaceus_europaeus
ENSSBOG00000028861	TRMT1	92	62.847	ENSELUG00000021659	trmt1	85	62.847	Esox_lucius
ENSSBOG00000028861	TRMT1	99	83.955	ENSFCAG00000000483	TRMT1	99	82.022	Felis_catus
ENSSBOG00000028861	TRMT1	98	82.680	ENSFDAG00000007386	TRMT1	96	81.384	Fukomys_damarensis
ENSSBOG00000028861	TRMT1	84	67.424	ENSFHEG00000012865	trmt1	90	66.111	Fundulus_heteroclitus
ENSSBOG00000028861	TRMT1	92	59.511	ENSGMOG00000006564	trmt1	98	60.035	Gadus_morhua
ENSSBOG00000028861	TRMT1	92	65.035	ENSGAFG00000011862	trmt1	88	65.867	Gambusia_affinis
ENSSBOG00000028861	TRMT1	94	61.395	ENSGACG00000000227	trmt1	94	61.864	Gasterosteus_aculeatus
ENSSBOG00000028861	TRMT1	93	67.478	ENSGAGG00000016432	TRMT1	87	66.214	Gopherus_agassizii
ENSSBOG00000028861	TRMT1	98	91.475	ENSGGOG00000014007	TRMT1	99	88.746	Gorilla_gorilla
ENSSBOG00000028861	TRMT1	92	56.392	ENSHBUG00000008821	trmt1	94	56.614	Haplochromis_burtoni
ENSSBOG00000028861	TRMT1	99	83.065	ENSHGLG00000015972	TRMT1	97	81.435	Heterocephalus_glaber_female
ENSSBOG00000028861	TRMT1	99	76.651	ENSHGLG00100018112	TRMT1	97	75.327	Heterocephalus_glaber_male
ENSSBOG00000028861	TRMT1	92	61.780	ENSHCOG00000009447	trmt1	88	61.780	Hippocampus_comes
ENSSBOG00000028861	TRMT1	93	62.982	ENSIPUG00000002899	trmt1	87	62.876	Ictalurus_punctatus
ENSSBOG00000028861	TRMT1	99	86.062	ENSSTOG00000012531	TRMT1	98	84.295	Ictidomys_tridecemlineatus
ENSSBOG00000028861	TRMT1	95	83.756	ENSJJAG00000017154	Trmt1	99	80.128	Jaculus_jaculus
ENSSBOG00000028861	TRMT1	92	65.674	ENSKMAG00000011809	trmt1	95	64.799	Kryptolebias_marmoratus
ENSSBOG00000028861	TRMT1	92	64.623	ENSLBEG00000012703	trmt1	84	64.623	Labrus_bergylta
ENSSBOG00000028861	TRMT1	93	55.766	ENSLACG00000014585	TRMT1	94	55.766	Latimeria_chalumnae
ENSSBOG00000028861	TRMT1	92	62.172	ENSLOCG00000006479	trmt1	97	62.347	Lepisosteus_oculatus
ENSSBOG00000028861	TRMT1	99	84.065	ENSLAFG00000014072	TRMT1	99	83.178	Loxodonta_africana
ENSSBOG00000028861	TRMT1	99	90.894	ENSMFAG00000033143	TRMT1	98	88.018	Macaca_fascicularis
ENSSBOG00000028861	TRMT1	99	84.566	ENSMMUG00000001167	TRMT1	99	84.566	Macaca_mulatta
ENSSBOG00000028861	TRMT1	99	91.057	ENSMNEG00000037867	TRMT1	98	88.172	Macaca_nemestrina
ENSSBOG00000028861	TRMT1	99	90.569	ENSMLEG00000016142	TRMT1	99	87.781	Mandrillus_leucophaeus
ENSSBOG00000028861	TRMT1	92	65.210	ENSMAMG00000004357	trmt1	85	65.210	Mastacembelus_armatus
ENSSBOG00000028861	TRMT1	92	63.047	ENSMZEG00005014510	trmt1	85	63.047	Maylandia_zebra
ENSSBOG00000028861	TRMT1	98	82.026	ENSMAUG00000011134	Trmt1	98	78.931	Mesocricetus_auratus
ENSSBOG00000028861	TRMT1	99	87.825	ENSMICG00000000793	TRMT1	98	85.736	Microcebus_murinus
ENSSBOG00000028861	TRMT1	98	82.951	ENSMOCG00000015895	Trmt1	98	78.963	Microtus_ochrogaster
ENSSBOG00000028861	TRMT1	92	63.222	ENSMMOG00000011097	trmt1	92	63.222	Mola_mola
ENSSBOG00000028861	TRMT1	95	74.281	ENSMODG00000011619	TRMT1	99	71.683	Monodelphis_domestica
ENSSBOG00000028861	TRMT1	98	82.787	MGP_CAROLIEiJ_G0031304	Trmt1	99	82.061	Mus_caroli
ENSSBOG00000028861	TRMT1	98	82.459	ENSMUSG00000001909	Trmt1	99	81.298	Mus_musculus
ENSSBOG00000028861	TRMT1	98	82.459	MGP_SPRETEiJ_G0032422	Trmt1	99	81.298	Mus_spretus
ENSSBOG00000028861	TRMT1	99	85.251	ENSMPUG00000004210	TRMT1	93	82.796	Mustela_putorius_furo
ENSSBOG00000028861	TRMT1	99	85.065	ENSMLUG00000012809	TRMT1	98	81.374	Myotis_lucifugus
ENSSBOG00000028861	TRMT1	99	81.656	ENSNGAG00000022486	Trmt1	98	79.598	Nannospalax_galili
ENSSBOG00000028861	TRMT1	80	65.672	ENSNBRG00000024376	trmt1	85	65.672	Neolamprologus_brichardi
ENSSBOG00000028861	TRMT1	83	88.955	ENSNLEG00000013019	-	99	88.955	Nomascus_leucogenys
ENSSBOG00000028861	TRMT1	95	73.356	ENSMEUG00000013756	TRMT1	100	73.077	Notamacropus_eugenii
ENSSBOG00000028861	TRMT1	81	83.452	ENSOPRG00000009471	-	79	83.452	Ochotona_princeps
ENSSBOG00000028861	TRMT1	99	83.630	ENSODEG00000010323	TRMT1	95	83.840	Octodon_degus
ENSSBOG00000028861	TRMT1	95	64.395	ENSONIG00000000400	trmt1	96	63.245	Oreochromis_niloticus
ENSSBOG00000028861	TRMT1	81	84.808	ENSOCUG00000021934	TRMT1	98	84.808	Oryctolagus_cuniculus
ENSSBOG00000028861	TRMT1	92	60.727	ENSORLG00000020074	trmt1	90	60.727	Oryzias_latipes
ENSSBOG00000028861	TRMT1	92	63.573	ENSORLG00020007561	trmt1	89	63.573	Oryzias_latipes_hni
ENSSBOG00000028861	TRMT1	92	63.923	ENSORLG00015006547	trmt1	86	63.923	Oryzias_latipes_hsok
ENSSBOG00000028861	TRMT1	92	64.448	ENSOMEG00000019343	trmt1	86	64.448	Oryzias_melastigma
ENSSBOG00000028861	TRMT1	97	84.375	ENSOGAG00000025576	TRMT1	98	82.400	Otolemur_garnettii
ENSSBOG00000028861	TRMT1	99	69.841	ENSOARG00000009397	TRMT1	92	70.032	Ovis_aries
ENSSBOG00000028861	TRMT1	99	75.851	ENSPPRG00000012117	TRMT1	100	74.318	Panthera_pardus
ENSSBOG00000028861	TRMT1	81	84.894	ENSPTIG00000008833	TRMT1	97	85.106	Panthera_tigris_altaica
ENSSBOG00000028861	TRMT1	99	68.455	ENSPTRG00000050421	-	99	66.615	Pan_troglodytes
ENSSBOG00000028861	TRMT1	98	91.311	ENSPTRG00000010557	TRMT1	99	88.746	Pan_troglodytes
ENSSBOG00000028861	TRMT1	99	91.057	ENSPANG00000009247	TRMT1	99	88.264	Papio_anubis
ENSSBOG00000028861	TRMT1	89	74.580	ENSPANG00000034058	-	98	73.061	Papio_anubis
ENSSBOG00000028861	TRMT1	92	66.202	ENSPKIG00000005309	trmt1	84	66.202	Paramormyrops_kingsleyae
ENSSBOG00000028861	TRMT1	91	57.801	ENSPSIG00000008762	TRMT1	80	57.801	Pelodiscus_sinensis
ENSSBOG00000028861	TRMT1	92	63.415	ENSPMGG00000019764	trmt1	90	63.415	Periophthalmus_magnuspinnatus
ENSSBOG00000028861	TRMT1	98	84.375	ENSPEMG00000016247	Trmt1	98	81.180	Peromyscus_maniculatus_bairdii
ENSSBOG00000028861	TRMT1	92	58.711	ENSPMAG00000004329	trmt1	89	58.711	Petromyzon_marinus
ENSSBOG00000028861	TRMT1	97	72.546	ENSPCIG00000019273	TRMT1	96	71.246	Phascolarctos_cinereus
ENSSBOG00000028861	TRMT1	92	66.783	ENSPFOG00000008527	trmt1	88	66.783	Poecilia_formosa
ENSSBOG00000028861	TRMT1	92	66.608	ENSPLAG00000018788	trmt1	87	69.632	Poecilia_latipinna
ENSSBOG00000028861	TRMT1	92	66.608	ENSPMEG00000013120	trmt1	88	66.608	Poecilia_mexicana
ENSSBOG00000028861	TRMT1	92	65.210	ENSPREG00000000211	trmt1	87	64.141	Poecilia_reticulata
ENSSBOG00000028861	TRMT1	98	91.475	ENSPPYG00000009622	TRMT1	99	88.940	Pongo_abelii
ENSSBOG00000028861	TRMT1	99	76.013	ENSPCAG00000003698	TRMT1	99	74.729	Procavia_capensis
ENSSBOG00000028861	TRMT1	99	88.149	ENSPCOG00000008653	TRMT1	99	85.875	Propithecus_coquereli
ENSSBOG00000028861	TRMT1	99	85.390	ENSPVAG00000015076	TRMT1	99	82.822	Pteropus_vampyrus
ENSSBOG00000028861	TRMT1	92	61.996	ENSPNYG00000013960	trmt1	92	61.996	Pundamilia_nyererei
ENSSBOG00000028861	TRMT1	86	65.353	ENSPNAG00000024859	trmt1	88	65.353	Pygocentrus_nattereri
ENSSBOG00000028861	TRMT1	98	82.787	ENSRNOG00000002914	Trmt1	95	82.787	Rattus_norvegicus
ENSSBOG00000028861	TRMT1	98	71.053	ENSRBIG00000037505	-	99	69.111	Rhinopithecus_bieti
ENSSBOG00000028861	TRMT1	99	90.244	ENSRBIG00000038324	TRMT1	98	87.558	Rhinopithecus_bieti
ENSSBOG00000028861	TRMT1	98	70.230	ENSRROG00000031847	-	98	68.331	Rhinopithecus_roxellana
ENSSBOG00000028861	TRMT1	99	90.081	ENSRROG00000028599	TRMT1	98	87.404	Rhinopithecus_roxellana
ENSSBOG00000028861	TRMT1	82	36.654	YDR120C	-	92	37.244	Saccharomyces_cerevisiae
ENSSBOG00000028861	TRMT1	92	74.564	ENSSHAG00000014381	TRMT1	98	72.250	Sarcophilus_harrisii
ENSSBOG00000028861	TRMT1	92	65.505	ENSSFOG00015004139	trmt1	84	65.505	Scleropages_formosus
ENSSBOG00000028861	TRMT1	92	64.634	ENSSMAG00000021136	trmt1	85	64.634	Scophthalmus_maximus
ENSSBOG00000028861	TRMT1	92	64.623	ENSSDUG00000012740	trmt1	84	64.623	Seriola_dumerili
ENSSBOG00000028861	TRMT1	92	64.448	ENSSLDG00000005971	trmt1	84	64.448	Seriola_lalandi_dorsalis
ENSSBOG00000028861	TRMT1	86	82.364	ENSSARG00000005138	TRMT1	99	80.392	Sorex_araneus
ENSSBOG00000028861	TRMT1	93	53.767	ENSSPUG00000001084	TRMT1	89	58.175	Sphenodon_punctatus
ENSSBOG00000028861	TRMT1	93	62.803	ENSSPAG00000007153	trmt1	99	60.591	Stegastes_partitus
ENSSBOG00000028861	TRMT1	99	85.900	ENSSSCG00000013744	TRMT1	100	83.699	Sus_scrofa
ENSSBOG00000028861	TRMT1	95	58.932	ENSTRUG00000010700	trmt1	89	59.265	Takifugu_rubripes
ENSSBOG00000028861	TRMT1	92	63.700	ENSTNIG00000018808	trmt1	98	63.700	Tetraodon_nigroviridis
ENSSBOG00000028861	TRMT1	99	82.792	ENSTTRG00000006379	TRMT1	99	80.828	Tursiops_truncatus
ENSSBOG00000028861	TRMT1	99	84.365	ENSUAMG00000022911	TRMT1	99	82.315	Ursus_americanus
ENSSBOG00000028861	TRMT1	99	83.955	ENSUMAG00000006027	TRMT1	100	82.104	Ursus_maritimus
ENSSBOG00000028861	TRMT1	99	85.737	ENSVVUG00000024177	TRMT1	98	84.049	Vulpes_vulpes
ENSSBOG00000028861	TRMT1	74	68.330	ENSXETG00000033863	TRMT1	92	68.330	Xenopus_tropicalis
ENSSBOG00000028861	TRMT1	92	65.559	ENSXCOG00000015733	trmt1	88	66.084	Xiphophorus_couchianus
ENSSBOG00000028861	TRMT1	92	64.983	ENSXMAG00000013823	trmt1	98	65.565	Xiphophorus_maculatus