EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000029155 (Gene tree)
Gene ID: 101048733
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 79650 bases
Position: chrJH378288.1:2612964-2692613
Accession: 7877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000026909	Not1	PF04054.15	1e-136	1	1
ENSSBOP00000026929	Not1	PF04054.15	1.2e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000043819	CNOT1-203	4425	-	ENSSBOP00000026943	1474 (aa)	-	A0A2K6U4W5
ENSSBOT00000043785	CNOT1-201	7008	XM_010331388	ENSSBOP00000026909	2335 (aa)	XP_010329690	A0A2K6U4W9
ENSSBOT00000043805	CNOT1-202	6837	-	ENSSBOP00000026929	2278 (aa)	-	A0A2K6U4Z0
ENSSBOT00000043839	CNOT1-204	291	-	ENSSBOP00000026963	96 (aa)	-	A0A2K6U4Y5

Gene Model

Click here to download ENSSBOG00000029155's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029155	CNOT1	100	95.479	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSSBOG00000029155	CNOT1	97	92.149	ENSAPOG00000005042	cnot1	100	92.149	Acanthochromis_polyacanthus
ENSSBOG00000029155	CNOT1	100	95.061	ENSAMEG00000017298	CNOT1	100	95.061	Ailuropoda_melanoleuca
ENSSBOG00000029155	CNOT1	90	85.317	ENSACIG00000016003	cnot1	100	85.595	Amphilophus_citrinellus
ENSSBOG00000029155	CNOT1	100	86.305	ENSAPEG00000022342	cnot1	100	86.221	Amphiprion_percula
ENSSBOG00000029155	CNOT1	97	92.287	ENSATEG00000012892	cnot1	100	92.287	Anabas_testudineus
ENSSBOG00000029155	CNOT1	100	93.272	ENSAPLG00000007162	CNOT1	100	93.272	Anas_platyrhynchos
ENSSBOG00000029155	CNOT1	92	91.443	ENSACAG00000001602	CNOT1	98	91.397	Anolis_carolinensis
ENSSBOG00000029155	CNOT1	100	94.589	ENSANAG00000038198	CNOT1	100	94.589	Aotus_nancymaae
ENSSBOG00000029155	CNOT1	97	92.287	ENSACLG00000014234	cnot1	100	92.287	Astatotilapia_calliptera
ENSSBOG00000029155	CNOT1	100	86.653	ENSAMXG00000013170	cnot1	100	86.867	Astyanax_mexicanus
ENSSBOG00000029155	CNOT1	100	95.312	ENSBTAG00000020782	CNOT1	100	95.382	Bos_taurus
ENSSBOG00000029155	CNOT1	81	39.632	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSSBOG00000029155	CNOT1	100	95.437	ENSCJAG00000011318	CNOT1	100	95.437	Callithrix_jacchus
ENSSBOG00000029155	CNOT1	100	94.987	ENSCAFG00000008426	CNOT1	100	94.987	Canis_familiaris
ENSSBOG00000029155	CNOT1	100	95.455	ENSCAFG00020010156	CNOT1	100	95.455	Canis_lupus_dingo
ENSSBOG00000029155	CNOT1	100	95.312	ENSCHIG00000010452	CNOT1	100	95.312	Capra_hircus
ENSSBOG00000029155	CNOT1	100	95.626	ENSTSYG00000006888	CNOT1	100	95.626	Carlito_syrichta
ENSSBOG00000029155	CNOT1	100	92.294	ENSCPOG00000013026	CNOT1	100	92.294	Cavia_porcellus
ENSSBOG00000029155	CNOT1	100	94.082	ENSCCAG00000026333	CNOT1	100	94.082	Cebus_capucinus
ENSSBOG00000029155	CNOT1	100	95.712	ENSCATG00000032625	CNOT1	100	95.712	Cercocebus_atys
ENSSBOG00000029155	CNOT1	100	95.228	ENSCLAG00000006289	CNOT1	100	95.228	Chinchilla_lanigera
ENSSBOG00000029155	CNOT1	100	95.521	ENSCSAG00000004731	CNOT1	100	95.521	Chlorocebus_sabaeus
ENSSBOG00000029155	CNOT1	80	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSSBOG00000029155	CNOT1	95	95.592	ENSCPBG00000026222	CNOT1	99	95.592	Chrysemys_picta_bellii
ENSSBOG00000029155	CNOT1	100	56.594	ENSCING00000009149	-	100	56.294	Ciona_intestinalis
ENSSBOG00000029155	CNOT1	89	59.768	ENSCSAVG00000002414	-	90	78.808	Ciona_savignyi
ENSSBOG00000029155	CNOT1	100	94.684	ENSCANG00000040534	CNOT1	100	94.684	Colobus_angolensis_palliatus
ENSSBOG00000029155	CNOT1	100	95.069	ENSCGRG00001016365	Cnot1	100	95.069	Cricetulus_griseus_chok1gshd
ENSSBOG00000029155	CNOT1	100	95.069	ENSCGRG00000001714	Cnot1	100	95.069	Cricetulus_griseus_crigri
ENSSBOG00000029155	CNOT1	100	78.971	ENSCVAG00000018930	cnot1	100	78.930	Cyprinodon_variegatus
ENSSBOG00000029155	CNOT1	100	85.744	ENSDARG00000004174	cnot1	100	85.619	Danio_rerio
ENSSBOG00000029155	CNOT1	100	92.762	ENSDNOG00000013250	CNOT1	100	92.762	Dasypus_novemcinctus
ENSSBOG00000029155	CNOT1	99	44.121	FBgn0085436	Not1	99	45.995	Drosophila_melanogaster
ENSSBOG00000029155	CNOT1	86	92.319	ENSETEG00000012806	CNOT1	84	92.319	Echinops_telfairi
ENSSBOG00000029155	CNOT1	80	78.095	ENSEBUG00000011534	cnot1	95	78.095	Eptatretus_burgeri
ENSSBOG00000029155	CNOT1	97	98.519	ENSEASG00005005819	CNOT1	99	98.519	Equus_asinus_asinus
ENSSBOG00000029155	CNOT1	100	95.354	ENSECAG00000009889	CNOT1	100	95.354	Equus_caballus
ENSSBOG00000029155	CNOT1	89	93.887	ENSEEUG00000006015	CNOT1	90	93.887	Erinaceus_europaeus
ENSSBOG00000029155	CNOT1	100	86.032	ENSELUG00000014085	cnot1	100	85.609	Esox_lucius
ENSSBOG00000029155	CNOT1	100	95.647	ENSFCAG00000025155	CNOT1	100	95.647	Felis_catus
ENSSBOG00000029155	CNOT1	100	93.261	ENSFALG00000007285	CNOT1	100	93.261	Ficedula_albicollis
ENSSBOG00000029155	CNOT1	100	95.326	ENSFDAG00000013399	CNOT1	100	95.326	Fukomys_damarensis
ENSSBOG00000029155	CNOT1	100	86.108	ENSFHEG00000020574	cnot1	100	86.066	Fundulus_heteroclitus
ENSSBOG00000029155	CNOT1	92	85.291	ENSGMOG00000012864	cnot1	100	85.661	Gadus_morhua
ENSSBOG00000029155	CNOT1	100	93.344	ENSGALG00000002301	CNOT1	100	93.344	Gallus_gallus
ENSSBOG00000029155	CNOT1	100	84.969	ENSGAFG00000015005	cnot1	100	84.969	Gambusia_affinis
ENSSBOG00000029155	CNOT1	92	86.038	ENSGACG00000002606	cnot1	100	91.637	Gasterosteus_aculeatus
ENSSBOG00000029155	CNOT1	100	93.264	ENSGAGG00000022646	CNOT1	100	93.305	Gopherus_agassizii
ENSSBOG00000029155	CNOT1	100	95.437	ENSGGOG00000009547	CNOT1	100	95.437	Gorilla_gorilla
ENSSBOG00000029155	CNOT1	97	92.287	ENSHBUG00000001729	cnot1	100	92.287	Haplochromis_burtoni
ENSSBOG00000029155	CNOT1	100	95.369	ENSHGLG00000014322	CNOT1	100	95.369	Heterocephalus_glaber_female
ENSSBOG00000029155	CNOT1	100	85.262	ENSHCOG00000006501	cnot1	100	85.405	Hippocampus_comes
ENSSBOG00000029155	CNOT1	100	84.773	ENSIPUG00000011915	cnot1	100	85.148	Ictalurus_punctatus
ENSSBOG00000029155	CNOT1	100	95.326	ENSSTOG00000005490	CNOT1	100	95.326	Ictidomys_tridecemlineatus
ENSSBOG00000029155	CNOT1	100	95.069	ENSJJAG00000000633	Cnot1	100	95.069	Jaculus_jaculus
ENSSBOG00000029155	CNOT1	100	86.023	ENSKMAG00000006149	cnot1	100	85.863	Kryptolebias_marmoratus
ENSSBOG00000029155	CNOT1	95	90.945	ENSLBEG00000004740	cnot1	100	90.945	Labrus_bergylta
ENSSBOG00000029155	CNOT1	100	90.666	ENSLACG00000010869	CNOT1	100	90.666	Latimeria_chalumnae
ENSSBOG00000029155	CNOT1	100	88.778	ENSLOCG00000006324	cnot1	100	88.778	Lepisosteus_oculatus
ENSSBOG00000029155	CNOT1	100	95.148	ENSLAFG00000000098	CNOT1	100	95.148	Loxodonta_africana
ENSSBOG00000029155	CNOT1	100	95.814	ENSMFAG00000035888	CNOT1	100	95.814	Macaca_fascicularis
ENSSBOG00000029155	CNOT1	100	95.669	ENSMMUG00000014625	CNOT1	100	95.669	Macaca_mulatta
ENSSBOG00000029155	CNOT1	100	93.303	ENSMNEG00000031820	CNOT1	100	95.032	Macaca_nemestrina
ENSSBOG00000029155	CNOT1	100	95.762	ENSMLEG00000040933	CNOT1	100	95.762	Mandrillus_leucophaeus
ENSSBOG00000029155	CNOT1	100	84.933	ENSMAMG00000016524	cnot1	100	84.969	Mastacembelus_armatus
ENSSBOG00000029155	CNOT1	97	92.287	ENSMZEG00005016210	cnot1	100	92.287	Maylandia_zebra
ENSSBOG00000029155	CNOT1	100	93.093	ENSMGAG00000001908	CNOT1	100	93.093	Meleagris_gallopavo
ENSSBOG00000029155	CNOT1	100	95.437	ENSMICG00000007071	CNOT1	100	95.437	Microcebus_murinus
ENSSBOG00000029155	CNOT1	100	95.111	ENSMOCG00000017969	Cnot1	100	95.111	Microtus_ochrogaster
ENSSBOG00000029155	CNOT1	97	88.981	ENSMMOG00000019134	cnot1	100	88.981	Mola_mola
ENSSBOG00000029155	CNOT1	100	93.515	ENSMODG00000014199	CNOT1	100	93.515	Monodelphis_domestica
ENSSBOG00000029155	CNOT1	100	86.048	ENSMALG00000008645	cnot1	100	86.048	Monopterus_albus
ENSSBOG00000029155	CNOT1	95	98.095	MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	Mus_caroli
ENSSBOG00000029155	CNOT1	100	95.154	ENSMUSG00000036550	Cnot1	100	95.154	Mus_musculus
ENSSBOG00000029155	CNOT1	100	95.111	MGP_PahariEiJ_G0023028	Cnot1	100	95.111	Mus_pahari
ENSSBOG00000029155	CNOT1	100	95.154	MGP_SPRETEiJ_G0032549	Cnot1	100	95.154	Mus_spretus
ENSSBOG00000029155	CNOT1	100	95.354	ENSMPUG00000004830	CNOT1	100	95.354	Mustela_putorius_furo
ENSSBOG00000029155	CNOT1	100	94.810	ENSMLUG00000003728	CNOT1	100	94.810	Myotis_lucifugus
ENSSBOG00000029155	CNOT1	100	95.369	ENSNGAG00000018628	Cnot1	100	95.369	Nannospalax_galili
ENSSBOG00000029155	CNOT1	94	92.287	ENSNBRG00000019358	cnot1	100	92.287	Neolamprologus_brichardi
ENSSBOG00000029155	CNOT1	100	95.626	ENSNLEG00000003566	CNOT1	100	95.626	Nomascus_leucogenys
ENSSBOG00000029155	CNOT1	86	96.250	ENSMEUG00000006145	CNOT1	87	96.250	Notamacropus_eugenii
ENSSBOG00000029155	CNOT1	85	100.000	ENSOPRG00000005604	CNOT1	85	100.000	Ochotona_princeps
ENSSBOG00000029155	CNOT1	100	95.283	ENSODEG00000016337	CNOT1	100	95.283	Octodon_degus
ENSSBOG00000029155	CNOT1	100	86.381	ENSONIG00000007358	cnot1	100	85.982	Oreochromis_niloticus
ENSSBOG00000029155	CNOT1	92	93.494	ENSOANG00000012109	CNOT1	100	93.178	Ornithorhynchus_anatinus
ENSSBOG00000029155	CNOT1	100	95.270	ENSOCUG00000006911	CNOT1	100	95.270	Oryctolagus_cuniculus
ENSSBOG00000029155	CNOT1	100	86.155	ENSORLG00000013734	cnot1	100	86.191	Oryzias_latipes
ENSSBOG00000029155	CNOT1	100	86.564	ENSORLG00020017012	cnot1	100	86.453	Oryzias_latipes_hni
ENSSBOG00000029155	CNOT1	100	86.478	ENSORLG00015007091	cnot1	100	86.197	Oryzias_latipes_hsok
ENSSBOG00000029155	CNOT1	100	86.020	ENSOMEG00000015124	cnot1	100	86.313	Oryzias_melastigma
ENSSBOG00000029155	CNOT1	100	95.186	ENSOGAG00000000543	CNOT1	100	95.186	Otolemur_garnettii
ENSSBOG00000029155	CNOT1	100	95.312	ENSOARG00000001567	CNOT1	100	95.312	Ovis_aries
ENSSBOG00000029155	CNOT1	100	95.669	ENSPPAG00000022013	CNOT1	100	95.669	Pan_paniscus
ENSSBOG00000029155	CNOT1	100	95.354	ENSPPRG00000004867	CNOT1	100	95.354	Panthera_pardus
ENSSBOG00000029155	CNOT1	100	95.354	ENSPTIG00000012589	CNOT1	100	95.354	Panthera_tigris_altaica
ENSSBOG00000029155	CNOT1	100	95.772	ENSPTRG00000008183	CNOT1	100	95.772	Pan_troglodytes
ENSSBOG00000029155	CNOT1	100	92.559	ENSPANG00000020901	CNOT1	100	92.559	Papio_anubis
ENSSBOG00000029155	CNOT1	97	88.552	ENSPKIG00000002914	CNOT1	99	88.552	Paramormyrops_kingsleyae
ENSSBOG00000029155	CNOT1	100	87.896	ENSPKIG00000023538	CNOT1	100	88.063	Paramormyrops_kingsleyae
ENSSBOG00000029155	CNOT1	100	93.386	ENSPSIG00000005499	CNOT1	100	93.386	Pelodiscus_sinensis
ENSSBOG00000029155	CNOT1	100	77.347	ENSPMAG00000009381	cnot1	100	77.244	Petromyzon_marinus
ENSSBOG00000029155	CNOT1	100	93.616	ENSPCIG00000007343	CNOT1	100	95.730	Phascolarctos_cinereus
ENSSBOG00000029155	CNOT1	99	85.751	ENSPFOG00000003497	cnot1	100	85.618	Poecilia_formosa
ENSSBOG00000029155	CNOT1	94	91.417	ENSPLAG00000014018	cnot1	100	91.417	Poecilia_latipinna
ENSSBOG00000029155	CNOT1	94	91.417	ENSPMEG00000005868	cnot1	100	91.417	Poecilia_mexicana
ENSSBOG00000029155	CNOT1	94	91.417	ENSPREG00000018793	cnot1	100	91.417	Poecilia_reticulata
ENSSBOG00000029155	CNOT1	100	95.437	ENSPPYG00000007410	CNOT1	100	95.437	Pongo_abelii
ENSSBOG00000029155	CNOT1	90	91.056	ENSPCAG00000003241	CNOT1	90	91.567	Procavia_capensis
ENSSBOG00000029155	CNOT1	100	95.479	ENSPCOG00000027139	CNOT1	100	95.479	Propithecus_coquereli
ENSSBOG00000029155	CNOT1	100	92.758	ENSPVAG00000004243	CNOT1	100	92.758	Pteropus_vampyrus
ENSSBOG00000029155	CNOT1	97	92.287	ENSPNYG00000012919	cnot1	100	92.287	Pundamilia_nyererei
ENSSBOG00000029155	CNOT1	100	85.774	ENSPNAG00000000246	cnot1	100	85.816	Pygocentrus_nattereri
ENSSBOG00000029155	CNOT1	100	94.893	ENSRNOG00000012271	Cnot1	100	94.893	Rattus_norvegicus
ENSSBOG00000029155	CNOT1	100	93.805	ENSRBIG00000044598	CNOT1	100	93.805	Rhinopithecus_bieti
ENSSBOG00000029155	CNOT1	100	95.712	ENSRROG00000000906	CNOT1	100	95.712	Rhinopithecus_roxellana
ENSSBOG00000029155	CNOT1	58	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSSBOG00000029155	CNOT1	100	93.685	ENSSHAG00000012187	CNOT1	100	93.601	Sarcophilus_harrisii
ENSSBOG00000029155	CNOT1	100	88.552	ENSSFOG00015017614	cnot1	100	88.291	Scleropages_formosus
ENSSBOG00000029155	CNOT1	97	92.287	ENSSMAG00000013844	cnot1	100	92.287	Scophthalmus_maximus
ENSSBOG00000029155	CNOT1	97	92.149	ENSSDUG00000021491	cnot1	100	92.149	Seriola_dumerili
ENSSBOG00000029155	CNOT1	97	92.149	ENSSLDG00000014816	cnot1	100	92.149	Seriola_lalandi_dorsalis
ENSSBOG00000029155	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSSBOG00000029155	CNOT1	100	86.394	ENSSPAG00000018802	cnot1	100	86.144	Stegastes_partitus
ENSSBOG00000029155	CNOT1	100	95.186	ENSSSCG00000002799	CNOT1	100	95.268	Sus_scrofa
ENSSBOG00000029155	CNOT1	100	93.144	ENSTGUG00000005919	CNOT1	100	93.144	Taeniopygia_guttata
ENSSBOG00000029155	CNOT1	100	84.896	ENSTNIG00000018706	cnot1	100	84.749	Tetraodon_nigroviridis
ENSSBOG00000029155	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSSBOG00000029155	CNOT1	95	97.455	ENSTTRG00000008460	CNOT1	95	97.455	Tursiops_truncatus
ENSSBOG00000029155	CNOT1	100	95.354	ENSUAMG00000009251	CNOT1	100	95.354	Ursus_americanus
ENSSBOG00000029155	CNOT1	100	95.354	ENSUMAG00000021291	CNOT1	100	95.354	Ursus_maritimus
ENSSBOG00000029155	CNOT1	97	93.048	ENSVPAG00000008846	CNOT1	97	93.048	Vicugna_pacos
ENSSBOG00000029155	CNOT1	100	94.926	ENSVVUG00000024037	CNOT1	100	95.325	Vulpes_vulpes
ENSSBOG00000029155	CNOT1	100	85.893	ENSXETG00000015900	cnot1	100	85.810	Xenopus_tropicalis
ENSSBOG00000029155	CNOT1	100	85.136	ENSXCOG00000013552	cnot1	100	85.136	Xiphophorus_couchianus
ENSSBOG00000029155	CNOT1	100	85.177	ENSXMAG00000006031	cnot1	100	85.177	Xiphophorus_maculatus