EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSBOG00000029273 (Gene tree)
Gene ID: 101042682
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 55237 bases
Position: chrJH378134.1:17625184-17680420
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000025612	MMR_HSR1	PF01926.23	1.4e-08	1	1
ENSSBOP00000025605	MMR_HSR1	PF01926.23	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000042472	SRL-201	5686	XM_010339131	ENSSBOP00000025605	887 (aa)	XP_010337433	A0A2K6U127
ENSSBOT00000042479	SRL-202	4409	XM_010339132	ENSSBOP00000025612	473 (aa)	XP_010337434	A0A2K6U128

Gene Model

Click here to download ENSSBOG00000029273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSBOG00000029273	SRL	86	32.048	ENSSBOG00000025594	EHD2	68	32.812
ENSSBOG00000029273	SRL	77	33.699	ENSSBOG00000023399	EHD1	73	33.699
ENSSBOG00000029273	SRL	74	33.429	ENSSBOG00000030935	EHD3	67	33.604
ENSSBOG00000029273	SRL	63	35.786	ENSSBOG00000035819	EHD4	56	35.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029273	SRL	100	98.943	ENSG00000185739	SRL	100	99.304	Homo_sapiens
ENSSBOG00000029273	SRL	100	80.338	ENSAPOG00000018093	srl	99	82.993	Acanthochromis_polyacanthus
ENSSBOG00000029273	SRL	93	76.244	ENSAPOG00000012432	SRL	98	74.888	Acanthochromis_polyacanthus
ENSSBOG00000029273	SRL	98	96.112	ENSAMEG00000010862	SRL	99	70.633	Ailuropoda_melanoleuca
ENSSBOG00000029273	SRL	96	81.898	ENSACIG00000015799	srl	98	83.032	Amphilophus_citrinellus
ENSSBOG00000029273	SRL	94	75.676	ENSACIG00000015419	SRL	98	75.792	Amphilophus_citrinellus
ENSSBOG00000029273	SRL	92	83.410	ENSAOCG00000007574	srl	100	83.410	Amphiprion_ocellaris
ENSSBOG00000029273	SRL	96	74.123	ENSAOCG00000017049	SRL	96	75.847	Amphiprion_ocellaris
ENSSBOG00000029273	SRL	96	70.549	ENSAPEG00000006533	SRL	96	71.946	Amphiprion_percula
ENSSBOG00000029273	SRL	100	80.550	ENSAPEG00000006911	srl	94	83.484	Amphiprion_percula
ENSSBOG00000029273	SRL	93	73.626	ENSATEG00000009643	SRL	52	72.747	Anabas_testudineus
ENSSBOG00000029273	SRL	100	79.704	ENSATEG00000024315	srl	94	83.258	Anabas_testudineus
ENSSBOG00000029273	SRL	93	90.287	ENSACAG00000016380	SRL	83	90.287	Anolis_carolinensis
ENSSBOG00000029273	SRL	93	73.187	ENSACLG00000024674	SRL	57	73.085	Astatotilapia_calliptera
ENSSBOG00000029273	SRL	98	81.075	ENSACLG00000027685	srl	97	83.032	Astatotilapia_calliptera
ENSSBOG00000029273	SRL	92	73.624	ENSAMXG00000038693	SRL	100	73.289	Astyanax_mexicanus
ENSSBOG00000029273	SRL	99	80.508	ENSAMXG00000018789	srl	86	84.127	Astyanax_mexicanus
ENSSBOG00000029273	SRL	96	96.044	ENSBTAG00000001078	SRL	99	68.834	Bos_taurus
ENSSBOG00000029273	SRL	100	100.000	ENSCJAG00000019750	SRL	100	100.000	Callithrix_jacchus
ENSSBOG00000029273	SRL	97	96.312	ENSCAFG00000019233	SRL	93	90.600	Canis_familiaris
ENSSBOG00000029273	SRL	96	97.351	ENSCAFG00020025024	SRL	98	71.804	Canis_lupus_dingo
ENSSBOG00000029273	SRL	97	95.870	ENSCHIG00000017927	SRL	98	70.905	Capra_hircus
ENSSBOG00000029273	SRL	100	97.463	ENSTSYG00000007919	SRL	100	98.608	Carlito_syrichta
ENSSBOG00000029273	SRL	97	96.718	ENSCPOG00000012643	SRL	94	97.517	Cavia_porcellus
ENSSBOG00000029273	SRL	100	93.658	ENSCCAG00000032646	SRL	100	99.736	Cebus_capucinus
ENSSBOG00000029273	SRL	100	99.154	ENSCATG00000032227	-	100	99.154	Cercocebus_atys
ENSSBOG00000029273	SRL	97	96.499	ENSCLAG00000016242	SRL	94	97.291	Chinchilla_lanigera
ENSSBOG00000029273	SRL	96	99.117	ENSCSAG00000009635	-	96	94.280	Chlorocebus_sabaeus
ENSSBOG00000029273	SRL	81	96.883	ENSCHOG00000001618	SRL	89	96.883	Choloepus_hoffmanni
ENSSBOG00000029273	SRL	96	93.005	ENSCPBG00000026371	SRL	93	89.823	Chrysemys_picta_bellii
ENSSBOG00000029273	SRL	88	60.192	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSSBOG00000029273	SRL	100	98.943	ENSCANG00000035872	SRL	100	99.304	Colobus_angolensis_palliatus
ENSSBOG00000029273	SRL	96	96.689	ENSCGRG00001016630	Srl	94	97.291	Cricetulus_griseus_chok1gshd
ENSSBOG00000029273	SRL	96	96.689	ENSCGRG00000005458	Srl	94	97.291	Cricetulus_griseus_crigri
ENSSBOG00000029273	SRL	100	79.915	ENSCSEG00000016151	srl	94	83.032	Cynoglossus_semilaevis
ENSSBOG00000029273	SRL	99	70.042	ENSCSEG00000011866	SRL	89	72.912	Cynoglossus_semilaevis
ENSSBOG00000029273	SRL	98	71.933	ENSCVAG00000022465	SRL	60	75.000	Cyprinodon_variegatus
ENSSBOG00000029273	SRL	93	83.937	ENSCVAG00000003513	srl	96	83.937	Cyprinodon_variegatus
ENSSBOG00000029273	SRL	100	81.184	ENSDARG00000104587	srl	94	84.842	Danio_rerio
ENSSBOG00000029273	SRL	80	77.083	ENSDARG00000112959	CABZ01072309.1	100	76.823	Danio_rerio
ENSSBOG00000029273	SRL	96	96.930	ENSDNOG00000011643	SRL	100	72.900	Dasypus_novemcinctus
ENSSBOG00000029273	SRL	100	96.195	ENSDORG00000014807	Srl	100	96.195	Dipodomys_ordii
ENSSBOG00000029273	SRL	77	65.775	ENSEBUG00000015937	srl	88	68.103	Eptatretus_burgeri
ENSSBOG00000029273	SRL	96	96.484	ENSEASG00005000942	SRL	99	71.349	Equus_asinus_asinus
ENSSBOG00000029273	SRL	99	96.186	ENSECAG00000024219	SRL	99	96.186	Equus_caballus
ENSSBOG00000029273	SRL	100	77.002	ENSELUG00000015616	srl	94	80.702	Esox_lucius
ENSSBOG00000029273	SRL	100	95.560	ENSFCAG00000022075	SRL	100	95.560	Felis_catus
ENSSBOG00000029273	SRL	96	90.487	ENSFALG00000004328	SRL	63	91.591	Ficedula_albicollis
ENSSBOG00000029273	SRL	96	97.345	ENSFDAG00000006199	SRL	94	97.968	Fukomys_damarensis
ENSSBOG00000029273	SRL	93	75.566	ENSFHEG00000011854	SRL	98	76.644	Fundulus_heteroclitus
ENSSBOG00000029273	SRL	100	79.915	ENSFHEG00000011239	srl	95	82.579	Fundulus_heteroclitus
ENSSBOG00000029273	SRL	93	81.898	ENSGMOG00000014954	srl	99	81.898	Gadus_morhua
ENSSBOG00000029273	SRL	99	88.771	ENSGALG00000038884	SRL	93	91.136	Gallus_gallus
ENSSBOG00000029273	SRL	93	76.471	ENSGAFG00000016984	SRL	98	76.644	Gambusia_affinis
ENSSBOG00000029273	SRL	100	79.915	ENSGAFG00000000010	srl	96	83.032	Gambusia_affinis
ENSSBOG00000029273	SRL	93	80.795	ENSGACG00000011332	srl	99	80.795	Gasterosteus_aculeatus
ENSSBOG00000029273	SRL	100	98.732	ENSGGOG00000011312	-	100	98.732	Gorilla_gorilla
ENSSBOG00000029273	SRL	93	72.967	ENSHBUG00000015710	SRL	57	72.967	Haplochromis_burtoni
ENSSBOG00000029273	SRL	98	81.075	ENSHBUG00000007581	srl	97	83.032	Haplochromis_burtoni
ENSSBOG00000029273	SRL	100	97.040	ENSHGLG00000015271	SRL	100	97.040	Heterocephalus_glaber_female
ENSSBOG00000029273	SRL	100	97.040	ENSHGLG00100019378	SRL	100	97.040	Heterocephalus_glaber_male
ENSSBOG00000029273	SRL	99	79.618	ENSHCOG00000008687	srl	98	82.805	Hippocampus_comes
ENSSBOG00000029273	SRL	95	72.331	ENSHCOG00000001012	SRL	50	71.523	Hippocampus_comes
ENSSBOG00000029273	SRL	100	79.070	ENSIPUG00000012513	srl	95	82.127	Ictalurus_punctatus
ENSSBOG00000029273	SRL	92	69.954	ENSIPUG00000011609	SRL	95	68.807	Ictalurus_punctatus
ENSSBOG00000029273	SRL	97	96.718	ENSSTOG00000021151	-	94	97.743	Ictidomys_tridecemlineatus
ENSSBOG00000029273	SRL	100	95.349	ENSJJAG00000016400	Srl	94	97.065	Jaculus_jaculus
ENSSBOG00000029273	SRL	93	76.417	ENSKMAG00000019537	SRL	100	76.417	Kryptolebias_marmoratus
ENSSBOG00000029273	SRL	98	79.654	ENSKMAG00000014115	srl	93	84.561	Kryptolebias_marmoratus
ENSSBOG00000029273	SRL	96	74.561	ENSLBEG00000013811	SRL	95	75.792	Labrus_bergylta
ENSSBOG00000029273	SRL	100	79.915	ENSLBEG00000026643	srl	94	82.805	Labrus_bergylta
ENSSBOG00000029273	SRL	96	84.989	ENSLACG00000002825	SRL	98	85.779	Latimeria_chalumnae
ENSSBOG00000029273	SRL	99	83.617	ENSLOCG00000002644	srl	94	86.425	Lepisosteus_oculatus
ENSSBOG00000029273	SRL	96	96.689	ENSLAFG00000006329	SRL	98	71.717	Loxodonta_africana
ENSSBOG00000029273	SRL	91	99.304	ENSMFAG00000037383	SRL	100	99.304	Macaca_fascicularis
ENSSBOG00000029273	SRL	100	95.407	ENSMNEG00000019236	-	100	95.407	Macaca_nemestrina
ENSSBOG00000029273	SRL	100	91.121	ENSMLEG00000032156	SRL	100	91.121	Mandrillus_leucophaeus
ENSSBOG00000029273	SRL	93	73.789	ENSMAMG00000013756	SRL	53	73.684	Mastacembelus_armatus
ENSSBOG00000029273	SRL	93	83.258	ENSMAMG00000023322	srl	94	83.258	Mastacembelus_armatus
ENSSBOG00000029273	SRL	93	73.187	ENSMZEG00005004010	SRL	57	72.088	Maylandia_zebra
ENSSBOG00000029273	SRL	98	81.075	ENSMZEG00005004548	srl	97	83.032	Maylandia_zebra
ENSSBOG00000029273	SRL	96	89.254	ENSMGAG00000009342	SRL	92	93.151	Meleagris_gallopavo
ENSSBOG00000029273	SRL	100	95.772	ENSMICG00000032307	SRL	96	96.468	Microcebus_murinus
ENSSBOG00000029273	SRL	100	95.560	ENSMOCG00000008208	Srl	94	97.065	Microtus_ochrogaster
ENSSBOG00000029273	SRL	93	72.967	ENSMMOG00000021572	SRL	99	73.128	Mola_mola
ENSSBOG00000029273	SRL	93	82.579	ENSMMOG00000013970	srl	98	82.579	Mola_mola
ENSSBOG00000029273	SRL	96	95.575	ENSMODG00000016380	-	99	61.515	Monodelphis_domestica
ENSSBOG00000029273	SRL	89	75.895	ENSMALG00000000670	SRL	98	75.120	Monopterus_albus
ENSSBOG00000029273	SRL	95	82.000	ENSMALG00000005039	srl	98	82.353	Monopterus_albus
ENSSBOG00000029273	SRL	97	96.499	MGP_CAROLIEiJ_G0020400	Srl	94	97.065	Mus_caroli
ENSSBOG00000029273	SRL	97	96.499	ENSMUSG00000022519	Srl	94	97.065	Mus_musculus
ENSSBOG00000029273	SRL	96	96.484	MGP_PahariEiJ_G0016108	Srl	100	71.504	Mus_pahari
ENSSBOG00000029273	SRL	97	96.499	MGP_SPRETEiJ_G0021294	Srl	94	97.065	Mus_spretus
ENSSBOG00000029273	SRL	97	96.288	ENSMPUG00000015025	SRL	97	73.432	Mustela_putorius_furo
ENSSBOG00000029273	SRL	98	95.054	ENSMLUG00000030733	SRL	99	73.606	Myotis_lucifugus
ENSSBOG00000029273	SRL	97	96.280	ENSNGAG00000019741	Srl	94	97.065	Nannospalax_galili
ENSSBOG00000029273	SRL	98	81.075	ENSNBRG00000023775	srl	94	83.032	Neolamprologus_brichardi
ENSSBOG00000029273	SRL	93	73.187	ENSNBRG00000002422	SRL	56	74.306	Neolamprologus_brichardi
ENSSBOG00000029273	SRL	100	91.966	ENSNLEG00000029051	SRL	100	91.966	Nomascus_leucogenys
ENSSBOG00000029273	SRL	96	89.845	ENSOPRG00000000477	-	100	69.222	Ochotona_princeps
ENSSBOG00000029273	SRL	97	96.499	ENSODEG00000013256	SRL	94	97.291	Octodon_degus
ENSSBOG00000029273	SRL	100	79.493	ENSONIG00000005192	srl	94	83.032	Oreochromis_niloticus
ENSSBOG00000029273	SRL	96	96.909	ENSOCUG00000025140	SRL	98	70.418	Oryctolagus_cuniculus
ENSSBOG00000029273	SRL	100	79.493	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSSBOG00000029273	SRL	96	73.407	ENSORLG00000015064	SRL	97	74.887	Oryzias_latipes
ENSSBOG00000029273	SRL	96	73.626	ENSORLG00020018173	SRL	97	75.113	Oryzias_latipes_hni
ENSSBOG00000029273	SRL	100	79.281	ENSORLG00020019784	srl	79	84.755	Oryzias_latipes_hni
ENSSBOG00000029273	SRL	96	73.846	ENSORLG00015019063	SRL	97	75.339	Oryzias_latipes_hsok
ENSSBOG00000029273	SRL	100	78.858	ENSORLG00015009342	srl	91	81.900	Oryzias_latipes_hsok
ENSSBOG00000029273	SRL	100	79.070	ENSOMEG00000010006	srl	98	82.045	Oryzias_melastigma
ENSSBOG00000029273	SRL	94	72.867	ENSOMEG00000005682	SRL	64	63.509	Oryzias_melastigma
ENSSBOG00000029273	SRL	96	95.806	ENSOGAG00000029266	SRL	99	75.576	Otolemur_garnettii
ENSSBOG00000029273	SRL	97	95.870	ENSOARG00000003074	SRL	57	95.870	Ovis_aries
ENSSBOG00000029273	SRL	100	98.520	ENSPPAG00000024919	-	100	99.072	Pan_paniscus
ENSSBOG00000029273	SRL	100	95.772	ENSPPRG00000010274	SRL	100	97.680	Panthera_pardus
ENSSBOG00000029273	SRL	100	95.772	ENSPTIG00000015162	SRL	100	97.680	Panthera_tigris_altaica
ENSSBOG00000029273	SRL	100	98.732	ENSPTRG00000007712	SRL	100	99.072	Pan_troglodytes
ENSSBOG00000029273	SRL	99	96.815	ENSPANG00000013804	SRL	100	96.815	Papio_anubis
ENSSBOG00000029273	SRL	100	73.784	ENSPKIG00000024974	SRL	88	77.149	Paramormyrops_kingsleyae
ENSSBOG00000029273	SRL	98	82.618	ENSPKIG00000006405	srl	93	84.842	Paramormyrops_kingsleyae
ENSSBOG00000029273	SRL	96	83.407	ENSPMGG00000021081	srl	95	84.199	Periophthalmus_magnuspinnatus
ENSSBOG00000029273	SRL	93	72.851	ENSPMGG00000023505	-	99	72.297	Periophthalmus_magnuspinnatus
ENSSBOG00000029273	SRL	96	96.272	ENSPEMG00000015842	Srl	94	97.065	Peromyscus_maniculatus_bairdii
ENSSBOG00000029273	SRL	89	68.119	ENSPMAG00000004786	srl	99	67.890	Petromyzon_marinus
ENSSBOG00000029273	SRL	96	95.796	ENSPCIG00000012128	SRL	97	96.380	Phascolarctos_cinereus
ENSSBOG00000029273	SRL	100	77.938	ENSPFOG00000011408	srl	93	81.015	Poecilia_formosa
ENSSBOG00000029273	SRL	93	76.018	ENSPLAG00000002932	SRL	98	75.057	Poecilia_latipinna
ENSSBOG00000029273	SRL	98	80.172	ENSPLAG00000008017	srl	96	82.805	Poecilia_latipinna
ENSSBOG00000029273	SRL	93	73.742	ENSPMEG00000005890	SRL	59	74.066	Poecilia_mexicana
ENSSBOG00000029273	SRL	100	79.704	ENSPMEG00000006745	srl	96	82.805	Poecilia_mexicana
ENSSBOG00000029273	SRL	93	77.149	ENSPREG00000000315	SRL	98	76.190	Poecilia_reticulata
ENSSBOG00000029273	SRL	100	79.493	ENSPREG00000007751	srl	98	82.805	Poecilia_reticulata
ENSSBOG00000029273	SRL	89	99.284	ENSPPYG00000007053	SRL	98	99.284	Pongo_abelii
ENSSBOG00000029273	SRL	96	95.575	ENSPCAG00000003378	-	85	91.767	Procavia_capensis
ENSSBOG00000029273	SRL	100	95.772	ENSPCOG00000023135	SRL	100	97.680	Propithecus_coquereli
ENSSBOG00000029273	SRL	96	97.572	ENSPVAG00000006586	SRL	100	73.986	Pteropus_vampyrus
ENSSBOG00000029273	SRL	93	73.187	ENSPNYG00000003423	SRL	57	72.088	Pundamilia_nyererei
ENSSBOG00000029273	SRL	98	81.075	ENSPNYG00000001200	srl	97	83.032	Pundamilia_nyererei
ENSSBOG00000029273	SRL	98	73.118	ENSPNAG00000007361	-	91	75.339	Pygocentrus_nattereri
ENSSBOG00000029273	SRL	100	78.858	ENSPNAG00000023106	srl	94	82.579	Pygocentrus_nattereri
ENSSBOG00000029273	SRL	96	96.468	ENSRNOG00000005269	Srl	100	70.390	Rattus_norvegicus
ENSSBOG00000029273	SRL	96	99.117	ENSRBIG00000042358	SRL	100	88.248	Rhinopithecus_bieti
ENSSBOG00000029273	SRL	97	94.748	ENSSHAG00000011715	-	99	62.378	Sarcophilus_harrisii
ENSSBOG00000029273	SRL	100	78.969	ENSSFOG00015009773	srl	94	84.163	Scleropages_formosus
ENSSBOG00000029273	SRL	93	73.742	ENSSMAG00000002232	SRL	50	72.747	Scophthalmus_maximus
ENSSBOG00000029273	SRL	93	82.579	ENSSMAG00000016274	srl	97	82.579	Scophthalmus_maximus
ENSSBOG00000029273	SRL	93	75.056	ENSSDUG00000009161	SRL	98	75.223	Seriola_dumerili
ENSSBOG00000029273	SRL	93	83.484	ENSSDUG00000010808	srl	97	83.484	Seriola_dumerili
ENSSBOG00000029273	SRL	93	74.617	ENSSLDG00000014601	SRL	99	74.725	Seriola_lalandi_dorsalis
ENSSBOG00000029273	SRL	95	82.262	ENSSLDG00000022024	srl	95	83.484	Seriola_lalandi_dorsalis
ENSSBOG00000029273	SRL	96	89.845	ENSSPUG00000016859	SRL	97	90.930	Sphenodon_punctatus
ENSSBOG00000029273	SRL	93	75.964	ENSSPAG00000014254	SRL	98	75.000	Stegastes_partitus
ENSSBOG00000029273	SRL	100	80.550	ENSSPAG00000019105	srl	94	83.710	Stegastes_partitus
ENSSBOG00000029273	SRL	96	96.484	ENSSSCG00000007949	SRL	99	96.875	Sus_scrofa
ENSSBOG00000029273	SRL	77	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSSBOG00000029273	SRL	96	90.265	ENSTGUG00000003951	-	97	91.364	Taeniopygia_guttata
ENSSBOG00000029273	SRL	100	80.338	ENSTRUG00000006005	srl	94	83.032	Takifugu_rubripes
ENSSBOG00000029273	SRL	89	75.418	ENSTRUG00000013310	SRL	55	75.418	Takifugu_rubripes
ENSSBOG00000029273	SRL	95	81.596	ENSTNIG00000009739	srl	94	82.805	Tetraodon_nigroviridis
ENSSBOG00000029273	SRL	93	96.591	ENSTTRG00000002709	-	69	96.591	Tursiops_truncatus
ENSSBOG00000029273	SRL	96	96.484	ENSUAMG00000005701	SRL	98	71.185	Ursus_americanus
ENSSBOG00000029273	SRL	96	96.703	ENSUMAG00000002574	SRL	98	71.169	Ursus_maritimus
ENSSBOG00000029273	SRL	96	96.930	ENSVVUG00000016331	-	87	71.380	Vulpes_vulpes
ENSSBOG00000029273	SRL	98	87.257	ENSXETG00000017313	srl	98	90.045	Xenopus_tropicalis
ENSSBOG00000029273	SRL	89	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSSBOG00000029273	SRL	95	74.945	ENSXCOG00000014584	SRL	98	76.190	Xiphophorus_couchianus
ENSSBOG00000029273	SRL	100	80.127	ENSXMAG00000004625	srl	90	83.258	Xiphophorus_maculatus
ENSSBOG00000029273	SRL	97	72.553	ENSXMAG00000027598	SRL	62	74.725	Xiphophorus_maculatus