EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSBOG00000029393 (Gene tree)
Gene ID: 101028781
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Saimiri_boliviensis_boliviensis
Status: putative
Strand: Minus strand
Length: 26643 bases
Position: chrJH378216.1:6498823-6525465
Accession: 30258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSBOP00000025869	Mago-bind	PF09282.10	1.1e-13	1	1
ENSSBOP00000025865	Mago-bind	PF09282.10	2.6e-13	1	1
ENSSBOP00000025875	Mago-bind	PF09282.10	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSBOT00000042749	PYM1-205	132	-	ENSSBOP00000025880	43 (aa)	-	A0A2K6U1V1
ENSSBOT00000042752	PYM1-206	234	-	ENSSBOP00000025883	77 (aa)	-	A0A2K6U1U1
ENSSBOT00000042744	PYM1-203	618	-	ENSSBOP00000025875	205 (aa)	-	A0A2K6U1U5
ENSSBOT00000042747	PYM1-204	138	-	ENSSBOP00000025878	45 (aa)	-	A0A2K6U1T6
ENSSBOT00000042738	PYM1-202	1226	XM_003939308	ENSSBOP00000025869	203 (aa)	XP_003939357	A0A2K6U1W2
ENSSBOT00000042734	PYM1-201	1696	XM_010349945	ENSSBOP00000025865	204 (aa)	XP_010348247	A0A2K6U1T7

Gene Model

Click here to download ENSSBOG00000029393's gene model file

Pathways

Pathway ID	Pathway Name	Source
sbq03013	RNA transport	KEGG
sbq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSBOG00000029393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSBOG00000029393	PYM1	100	99.507	ENSG00000170473	PYM1	100	99.507	Homo_sapiens
ENSSBOG00000029393	PYM1	99	57.944	ENSAPOG00000023045	pym1	94	58.049	Acanthochromis_polyacanthus
ENSSBOG00000029393	PYM1	93	92.021	ENSAMEG00000003091	PYM1	93	92.021	Ailuropoda_melanoleuca
ENSSBOG00000029393	PYM1	99	61.111	ENSACIG00000012769	pym1	94	59.420	Amphilophus_citrinellus
ENSSBOG00000029393	PYM1	99	58.294	ENSAOCG00000021358	pym1	94	58.824	Amphiprion_ocellaris
ENSSBOG00000029393	PYM1	99	58.294	ENSAPEG00000022679	pym1	94	58.824	Amphiprion_percula
ENSSBOG00000029393	PYM1	99	57.944	ENSATEG00000024022	pym1	94	60.488	Anabas_testudineus
ENSSBOG00000029393	PYM1	94	67.980	ENSACAG00000005714	PYM1	94	67.980	Anolis_carolinensis
ENSSBOG00000029393	PYM1	100	99.510	ENSANAG00000036967	PYM1	100	99.510	Aotus_nancymaae
ENSSBOG00000029393	PYM1	100	57.339	ENSAMXG00000007650	pym1	94	60.194	Astyanax_mexicanus
ENSSBOG00000029393	PYM1	94	95.288	ENSBTAG00000031146	PYM1	94	95.288	Bos_taurus
ENSSBOG00000029393	PYM1	100	99.020	ENSCJAG00000041077	PYM1	100	99.020	Callithrix_jacchus
ENSSBOG00000029393	PYM1	100	97.044	ENSCAFG00000000076	PYM1	100	97.044	Canis_familiaris
ENSSBOG00000029393	PYM1	100	97.044	ENSCAFG00020026099	PYM1	100	97.044	Canis_lupus_dingo
ENSSBOG00000029393	PYM1	94	92.670	ENSCHIG00000026207	PYM1	94	92.670	Capra_hircus
ENSSBOG00000029393	PYM1	94	94.764	ENSTSYG00000000787	PYM1	94	94.764	Carlito_syrichta
ENSSBOG00000029393	PYM1	88	92.737	ENSCAPG00000010374	PYM1	94	92.737	Cavia_aperea
ENSSBOG00000029393	PYM1	94	93.194	ENSCPOG00000031546	PYM1	94	93.194	Cavia_porcellus
ENSSBOG00000029393	PYM1	100	100.000	ENSCCAG00000026187	PYM1	100	100.000	Cebus_capucinus
ENSSBOG00000029393	PYM1	100	98.522	ENSCATG00000018801	PYM1	100	98.522	Cercocebus_atys
ENSSBOG00000029393	PYM1	94	88.482	ENSCLAG00000007964	PYM1	94	88.482	Chinchilla_lanigera
ENSSBOG00000029393	PYM1	95	98.438	ENSCSAG00000005291	PYM1	99	97.927	Chlorocebus_sabaeus
ENSSBOG00000029393	PYM1	98	39.623	ENSCING00000006448	-	93	43.902	Ciona_intestinalis
ENSSBOG00000029393	PYM1	98	38.028	ENSCSAVG00000009805	-	89	40.976	Ciona_savignyi
ENSSBOG00000029393	PYM1	98	89.899	ENSCANG00000019757	-	86	94.737	Colobus_angolensis_palliatus
ENSSBOG00000029393	PYM1	100	98.522	ENSCANG00000020338	-	100	98.522	Colobus_angolensis_palliatus
ENSSBOG00000029393	PYM1	94	75.393	ENSCGRG00001004231	-	93	75.393	Cricetulus_griseus_chok1gshd
ENSSBOG00000029393	PYM1	94	90.052	ENSCGRG00001018051	-	94	90.052	Cricetulus_griseus_chok1gshd
ENSSBOG00000029393	PYM1	94	75.393	ENSCGRG00000018933	-	93	75.393	Cricetulus_griseus_crigri
ENSSBOG00000029393	PYM1	94	90.052	ENSCGRG00000012495	-	94	90.052	Cricetulus_griseus_crigri
ENSSBOG00000029393	PYM1	94	55.882	ENSCSEG00000021531	pym1	94	58.128	Cynoglossus_semilaevis
ENSSBOG00000029393	PYM1	96	60.680	ENSCVAG00000017360	pym1	83	60.406	Cyprinodon_variegatus
ENSSBOG00000029393	PYM1	99	57.500	ENSDARG00000046024	pym1	94	55.556	Danio_rerio
ENSSBOG00000029393	PYM1	94	92.147	ENSDNOG00000048414	PYM1	86	92.147	Dasypus_novemcinctus
ENSSBOG00000029393	PYM1	94	94.241	ENSDORG00000029448	Pym1	94	94.241	Dipodomys_ordii
ENSSBOG00000029393	PYM1	93	35.644	FBgn0034918	Pym	88	33.668	Drosophila_melanogaster
ENSSBOG00000029393	PYM1	89	88.333	ENSETEG00000004461	-	94	88.333	Echinops_telfairi
ENSSBOG00000029393	PYM1	93	92.021	ENSEASG00005002271	PYM1	81	96.067	Equus_asinus_asinus
ENSSBOG00000029393	PYM1	100	96.552	ENSECAG00000011870	PYM1	100	96.552	Equus_caballus
ENSSBOG00000029393	PYM1	96	58.291	ENSELUG00000024250	pym1	94	59.091	Esox_lucius
ENSSBOG00000029393	PYM1	100	96.552	ENSFCAG00000013967	PYM1	100	96.552	Felis_catus
ENSSBOG00000029393	PYM1	94	93.717	ENSFDAG00000006314	PYM1	94	93.717	Fukomys_damarensis
ENSSBOG00000029393	PYM1	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSSBOG00000029393	PYM1	94	57.436	ENSGMOG00000007239	pym1	93	58.462	Gadus_morhua
ENSSBOG00000029393	PYM1	94	70.256	ENSGALG00000046169	PYM1	94	70.256	Gallus_gallus
ENSSBOG00000029393	PYM1	99	61.033	ENSGAFG00000003280	pym1	93	61.194	Gambusia_affinis
ENSSBOG00000029393	PYM1	100	55.340	ENSGACG00000010703	pym1	94	55.897	Gasterosteus_aculeatus
ENSSBOG00000029393	PYM1	91	65.500	ENSGAGG00000001973	PYM1	88	64.216	Gopherus_agassizii
ENSSBOG00000029393	PYM1	100	99.015	ENSGGOG00000043246	PYM1	100	99.015	Gorilla_gorilla
ENSSBOG00000029393	PYM1	94	60.294	ENSHBUG00000012719	pym1	94	60.294	Haplochromis_burtoni
ENSSBOG00000029393	PYM1	94	94.764	ENSHGLG00000017155	PYM1	94	94.764	Heterocephalus_glaber_female
ENSSBOG00000029393	PYM1	94	94.764	ENSHGLG00100015341	PYM1	94	94.764	Heterocephalus_glaber_male
ENSSBOG00000029393	PYM1	99	57.619	ENSHCOG00000007987	pym1	80	58.081	Hippocampus_comes
ENSSBOG00000029393	PYM1	100	59.242	ENSIPUG00000005975	wibga	94	59.296	Ictalurus_punctatus
ENSSBOG00000029393	PYM1	94	95.812	ENSSTOG00000014206	PYM1	94	95.812	Ictidomys_tridecemlineatus
ENSSBOG00000029393	PYM1	94	90.576	ENSJJAG00000013338	Pym1	94	90.576	Jaculus_jaculus
ENSSBOG00000029393	PYM1	99	56.757	ENSKMAG00000006351	pym1	95	55.869	Kryptolebias_marmoratus
ENSSBOG00000029393	PYM1	99	59.615	ENSLBEG00000015707	pym1	94	59.296	Labrus_bergylta
ENSSBOG00000029393	PYM1	94	58.333	ENSLACG00000014398	PYM1	94	58.333	Latimeria_chalumnae
ENSSBOG00000029393	PYM1	94	93.194	ENSLAFG00000002369	PYM1	94	93.194	Loxodonta_africana
ENSSBOG00000029393	PYM1	100	98.522	ENSMFAG00000003048	PYM1	100	98.522	Macaca_fascicularis
ENSSBOG00000029393	PYM1	100	98.522	ENSMMUG00000011002	PYM1	100	98.522	Macaca_mulatta
ENSSBOG00000029393	PYM1	100	98.522	ENSMNEG00000034677	PYM1	100	98.522	Macaca_nemestrina
ENSSBOG00000029393	PYM1	100	98.522	ENSMLEG00000007971	PYM1	100	98.522	Mandrillus_leucophaeus
ENSSBOG00000029393	PYM1	99	55.455	ENSMAMG00000001588	pym1	94	57.346	Mastacembelus_armatus
ENSSBOG00000029393	PYM1	94	59.804	ENSMZEG00005026458	pym1	94	59.804	Maylandia_zebra
ENSSBOG00000029393	PYM1	94	90.052	ENSMAUG00000007318	Pym1	94	90.052	Mesocricetus_auratus
ENSSBOG00000029393	PYM1	100	96.552	ENSMICG00000032962	PYM1	100	96.552	Microcebus_murinus
ENSSBOG00000029393	PYM1	94	87.958	ENSMOCG00000010208	Pym1	94	87.958	Microtus_ochrogaster
ENSSBOG00000029393	PYM1	99	57.282	ENSMMOG00000009301	pym1	92	60.309	Mola_mola
ENSSBOG00000029393	PYM1	99	58.491	ENSMALG00000013496	pym1	94	58.209	Monopterus_albus
ENSSBOG00000029393	PYM1	94	90.052	MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	Mus_caroli
ENSSBOG00000029393	PYM1	94	91.099	ENSMUSG00000064030	Pym1	94	91.099	Mus_musculus
ENSSBOG00000029393	PYM1	94	89.005	MGP_PahariEiJ_G0031131	Pym1	94	89.005	Mus_pahari
ENSSBOG00000029393	PYM1	94	91.099	MGP_SPRETEiJ_G0016778	Pym1	94	91.099	Mus_spretus
ENSSBOG00000029393	PYM1	100	97.044	ENSMPUG00000000931	PYM1	100	97.044	Mustela_putorius_furo
ENSSBOG00000029393	PYM1	94	90.052	ENSMLUG00000003586	PYM1	92	93.011	Myotis_lucifugus
ENSSBOG00000029393	PYM1	93	89.005	ENSNGAG00000019207	Pym1	93	89.005	Nannospalax_galili
ENSSBOG00000029393	PYM1	99	61.033	ENSNBRG00000006951	pym1	94	60.294	Neolamprologus_brichardi
ENSSBOG00000029393	PYM1	100	99.507	ENSNLEG00000017588	PYM1	100	99.507	Nomascus_leucogenys
ENSSBOG00000029393	PYM1	88	79.775	ENSMEUG00000001017	PYM1	93	79.888	Notamacropus_eugenii
ENSSBOG00000029393	PYM1	94	89.062	ENSOPRG00000007797	PYM1	94	89.062	Ochotona_princeps
ENSSBOG00000029393	PYM1	94	93.717	ENSODEG00000004289	PYM1	94	93.717	Octodon_degus
ENSSBOG00000029393	PYM1	94	59.420	ENSONIG00000016740	pym1	94	59.420	Oreochromis_niloticus
ENSSBOG00000029393	PYM1	89	92.222	ENSOCUG00000025969	PYM1	83	90.811	Oryctolagus_cuniculus
ENSSBOG00000029393	PYM1	99	61.722	ENSORLG00000030592	pym1	94	61.307	Oryzias_latipes
ENSSBOG00000029393	PYM1	99	61.137	ENSORLG00020011264	pym1	94	61.194	Oryzias_latipes_hni
ENSSBOG00000029393	PYM1	99	62.500	ENSORLG00015005287	pym1	94	62.121	Oryzias_latipes_hsok
ENSSBOG00000029393	PYM1	99	62.136	ENSOMEG00000022250	pym1	94	61.421	Oryzias_melastigma
ENSSBOG00000029393	PYM1	94	96.891	ENSOGAG00000007038	PYM1	95	96.891	Otolemur_garnettii
ENSSBOG00000029393	PYM1	94	93.194	ENSOARG00000010856	PYM1	94	93.194	Ovis_aries
ENSSBOG00000029393	PYM1	100	99.507	ENSPPAG00000043630	PYM1	100	99.507	Pan_paniscus
ENSSBOG00000029393	PYM1	94	94.764	ENSPPRG00000013243	PYM1	94	94.764	Panthera_pardus
ENSSBOG00000029393	PYM1	94	94.241	ENSPTIG00000017380	PYM1	94	94.241	Panthera_tigris_altaica
ENSSBOG00000029393	PYM1	100	99.507	ENSPTRG00000005067	PYM1	100	99.507	Pan_troglodytes
ENSSBOG00000029393	PYM1	100	98.030	ENSPANG00000009562	PYM1	100	98.030	Papio_anubis
ENSSBOG00000029393	PYM1	100	60.849	ENSPKIG00000006301	pym1	94	60.000	Paramormyrops_kingsleyae
ENSSBOG00000029393	PYM1	94	64.251	ENSPSIG00000003043	PYM1	94	64.390	Pelodiscus_sinensis
ENSSBOG00000029393	PYM1	100	61.722	ENSPMGG00000023161	pym1	94	61.929	Periophthalmus_magnuspinnatus
ENSSBOG00000029393	PYM1	94	88.482	ENSPEMG00000009372	Pym1	94	88.482	Peromyscus_maniculatus_bairdii
ENSSBOG00000029393	PYM1	92	79.570	ENSPCIG00000024658	PYM1	94	76.804	Phascolarctos_cinereus
ENSSBOG00000029393	PYM1	99	62.085	ENSPFOG00000008193	pym1	93	62.312	Poecilia_formosa
ENSSBOG00000029393	PYM1	99	61.137	ENSPLAG00000009228	pym1	93	61.307	Poecilia_latipinna
ENSSBOG00000029393	PYM1	99	61.137	ENSPMEG00000001505	pym1	93	61.307	Poecilia_mexicana
ENSSBOG00000029393	PYM1	100	97.549	ENSPPYG00000004635	PYM1	100	97.549	Pongo_abelii
ENSSBOG00000029393	PYM1	100	97.537	ENSPCOG00000019706	PYM1	100	97.537	Propithecus_coquereli
ENSSBOG00000029393	PYM1	95	97.917	ENSPVAG00000011437	PYM1	100	95.918	Pteropus_vampyrus
ENSSBOG00000029393	PYM1	94	60.591	ENSPNYG00000012871	pym1	94	60.099	Pundamilia_nyererei
ENSSBOG00000029393	PYM1	99	58.716	ENSPNAG00000018833	pym1	94	59.330	Pygocentrus_nattereri
ENSSBOG00000029393	PYM1	94	84.375	ENSRNOG00000058130	Pym1	94	84.375	Rattus_norvegicus
ENSSBOG00000029393	PYM1	92	67.380	ENSRNOG00000049415	AABR07055413.1	91	62.234	Rattus_norvegicus
ENSSBOG00000029393	PYM1	100	94.089	ENSRBIG00000033362	PYM1	100	94.089	Rhinopithecus_bieti
ENSSBOG00000029393	PYM1	100	98.522	ENSRROG00000043620	PYM1	100	98.522	Rhinopithecus_roxellana
ENSSBOG00000029393	PYM1	93	81.481	ENSSHAG00000008280	PYM1	93	81.481	Sarcophilus_harrisii
ENSSBOG00000029393	PYM1	93	64.062	ENSSFOG00015021475	pym1	94	63.590	Scleropages_formosus
ENSSBOG00000029393	PYM1	99	58.294	ENSSMAG00000020912	pym1	94	59.406	Scophthalmus_maximus
ENSSBOG00000029393	PYM1	99	56.279	ENSSDUG00000001807	pym1	94	58.937	Seriola_dumerili
ENSSBOG00000029393	PYM1	99	60.488	ENSSLDG00000013730	pym1	94	62.437	Seriola_lalandi_dorsalis
ENSSBOG00000029393	PYM1	89	91.667	ENSSARG00000009569	PYM1	94	91.667	Sorex_araneus
ENSSBOG00000029393	PYM1	93	63.452	ENSSPUG00000015059	PYM1	94	63.452	Sphenodon_punctatus
ENSSBOG00000029393	PYM1	99	57.477	ENSSPAG00000020100	pym1	94	57.547	Stegastes_partitus
ENSSBOG00000029393	PYM1	94	94.241	ENSSSCG00000040825	PYM1	94	94.241	Sus_scrofa
ENSSBOG00000029393	PYM1	99	59.135	ENSTRUG00000021367	pym1	93	60.204	Takifugu_rubripes
ENSSBOG00000029393	PYM1	99	57.971	ENSTNIG00000012534	pym1	90	57.754	Tetraodon_nigroviridis
ENSSBOG00000029393	PYM1	89	88.333	ENSTBEG00000004208	PYM1	94	88.333	Tupaia_belangeri
ENSSBOG00000029393	PYM1	94	93.750	ENSTTRG00000014971	PYM1	94	94.022	Tursiops_truncatus
ENSSBOG00000029393	PYM1	94	95.288	ENSUAMG00000014521	PYM1	94	95.288	Ursus_americanus
ENSSBOG00000029393	PYM1	94	90.625	ENSUMAG00000016241	PYM1	84	92.432	Ursus_maritimus
ENSSBOG00000029393	PYM1	100	96.059	ENSVVUG00000022749	PYM1	100	96.059	Vulpes_vulpes
ENSSBOG00000029393	PYM1	94	62.626	ENSXETG00000021850	pym1	94	63.500	Xenopus_tropicalis
ENSSBOG00000029393	PYM1	99	61.137	ENSXMAG00000011649	pym1	93	61.307	Xiphophorus_maculatus